| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is glmM [H]
Identifier: 78778665
GI number: 78778665
Start: 268019
End: 269473
Strand: Direct
Name: glmM [H]
Synonym: PMT9312_0280
Alternate gene names: 78778665
Gene position: 268019-269473 (Clockwise)
Preceding gene: 78778663
Following gene: 78778666
Centisome position: 15.68
GC content: 29.42
Gene sequence:
>1455_bases TTGGCAGGTGAAACATTAGATAACATAAAATTTGGAACTGATGGGTGGAGAGGAATTATTGGATTTGATTTTAATATTTC CAATCTTTCAAGGGTTGTAGTGGCGGCATGCCAGGAGTTGCATTATCAATTTCATAAAGAAGTTAATTCAAAGAAAATTT TAATTGGATATGATCGTAGATTTATGGCAATTGAATTTGCCAAGCAAATAGTTCCTTTCGTAAAAGGATGTGGTTTTGAA CCTATCTTGTCTAATAGTTTTGTTACAACGCCTTCTTGTAGTTTTTATGCTAAAGAAATGAATTGTTTGGGAGCTTTAGT TATTACAGCAAGTCATAATCCATACAATTGGTTGGGTCTAAAAATAAAAAGTTTTAATGGATGTTCTGTTGATGAATCTT TTACAACTGAAATTGAAAAAAGATTAATGCTTGGTAATGCAATTGATAAACTAGAGGATTCATATGAAATTGCGGATGTT AAGAAGTTACATTTAGATAGAATTAAATCTCTTTTTGATATTGAATTTATTGCTAATCAATTGAAAAAAATGAATATGAG GATTTTTGTCGATTCTATGCATGGTTCAGCTGCAAAATGCATAGCTGAGATTTTTGGTGGTAATGATTCAGAAGTAGTTT CAGAAATTAGAGAAGATGCTGATCCTTTTTTTGGAGGAAATCCTCCCGAGCCTCTTTTAAATTATTTAGATGACTTAAAT GAAACACTTATAAAAAATTCAAAAAATGAAGTAAAAACTTTAGGAATTATATTTGATGGAGATGGTGACAGAATTGCGGC AATTGATGAAAAAGGTAGATACTGTAGTACACAAGATTTATTACCATACTTTATTAGCTATTTGGGAGAAATTAACCATA ATTCTTATCCAGTTTTAAAGACTGTTAGTGGTTCAGATATTATTAAAAATATATCAGAGAGCCAAAATAGAGATGTTTTT GAACTTCCAGTTGGCTTTAAATATATTGCTGAAAAAATGATTAAAGAGAAAATATTTATTGGAGGAGAGGAATCTGGGGG AGTTGGTTTTGGTAACTTTATGCCTGAAAGAGATGCTCTATATGCAGCGATAGTTTTATTAAATGGAATTGCTGAAAAAT CTCAATATTTATATGAAACTTTAGATGAAATTCAAAAAGATTTTGGACCAAGTGTTTATAAAAGAATTGATATTAAATTT CCAAATCAGTCAGAAAAAAATAACGTAAAAGAATTTATCATAGATAATATTCCTGAGAATATTAATAATCACAAGTTAAA AAGTATCTCAAAGATTGATGGAATAAAGTTGAGAATTGATAAAAATTTTTGGCTTCTTTTTAGGTTTTCAGGAACGGAAC CTCTTTTAAGGTTATATTGTGAAGCACCAAAAGAATCTTATTTAGATGAGTTATTAGAGTGGGGTCAAGTATTTATAAAT TTGGCAGGAAAATAA
Upstream 100 bases:
>100_bases TTTTAAATAAAGAGTATTCAAATTATTTTGAAGCTTAGTTTTAAAAATTACTTATATAAATTAATATAGATAATTAAAAC AAATAAAGGAACTTTTAAAT
Downstream 100 bases:
>100_bases GGATGAAAAATTTATATTTAGCGAGTAAGAATAAAGGTAAAATTGAAGAATATAAGAAATTGCTTGCTGGAGTTAATTGT AAATTATTACTCCAGCCAGA
Product: phosphomannomutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 484; Mature: 483
Protein sequence:
>484_residues MAGETLDNIKFGTDGWRGIIGFDFNISNLSRVVVAACQELHYQFHKEVNSKKILIGYDRRFMAIEFAKQIVPFVKGCGFE PILSNSFVTTPSCSFYAKEMNCLGALVITASHNPYNWLGLKIKSFNGCSVDESFTTEIEKRLMLGNAIDKLEDSYEIADV KKLHLDRIKSLFDIEFIANQLKKMNMRIFVDSMHGSAAKCIAEIFGGNDSEVVSEIREDADPFFGGNPPEPLLNYLDDLN ETLIKNSKNEVKTLGIIFDGDGDRIAAIDEKGRYCSTQDLLPYFISYLGEINHNSYPVLKTVSGSDIIKNISESQNRDVF ELPVGFKYIAEKMIKEKIFIGGEESGGVGFGNFMPERDALYAAIVLLNGIAEKSQYLYETLDEIQKDFGPSVYKRIDIKF PNQSEKNNVKEFIIDNIPENINNHKLKSISKIDGIKLRIDKNFWLLFRFSGTEPLLRLYCEAPKESYLDELLEWGQVFIN LAGK
Sequences:
>Translated_484_residues MAGETLDNIKFGTDGWRGIIGFDFNISNLSRVVVAACQELHYQFHKEVNSKKILIGYDRRFMAIEFAKQIVPFVKGCGFE PILSNSFVTTPSCSFYAKEMNCLGALVITASHNPYNWLGLKIKSFNGCSVDESFTTEIEKRLMLGNAIDKLEDSYEIADV KKLHLDRIKSLFDIEFIANQLKKMNMRIFVDSMHGSAAKCIAEIFGGNDSEVVSEIREDADPFFGGNPPEPLLNYLDDLN ETLIKNSKNEVKTLGIIFDGDGDRIAAIDEKGRYCSTQDLLPYFISYLGEINHNSYPVLKTVSGSDIIKNISESQNRDVF ELPVGFKYIAEKMIKEKIFIGGEESGGVGFGNFMPERDALYAAIVLLNGIAEKSQYLYETLDEIQKDFGPSVYKRIDIKF PNQSEKNNVKEFIIDNIPENINNHKLKSISKIDGIKLRIDKNFWLLFRFSGTEPLLRLYCEAPKESYLDELLEWGQVFIN LAGK >Mature_483_residues AGETLDNIKFGTDGWRGIIGFDFNISNLSRVVVAACQELHYQFHKEVNSKKILIGYDRRFMAIEFAKQIVPFVKGCGFEP ILSNSFVTTPSCSFYAKEMNCLGALVITASHNPYNWLGLKIKSFNGCSVDESFTTEIEKRLMLGNAIDKLEDSYEIADVK KLHLDRIKSLFDIEFIANQLKKMNMRIFVDSMHGSAAKCIAEIFGGNDSEVVSEIREDADPFFGGNPPEPLLNYLDDLNE TLIKNSKNEVKTLGIIFDGDGDRIAAIDEKGRYCSTQDLLPYFISYLGEINHNSYPVLKTVSGSDIIKNISESQNRDVFE LPVGFKYIAEKMIKEKIFIGGEESGGVGFGNFMPERDALYAAIVLLNGIAEKSQYLYETLDEIQKDFGPSVYKRIDIKFP NQSEKNNVKEFIIDNIPENINNHKLKSISKIDGIKLRIDKNFWLLFRFSGTEPLLRLYCEAPKESYLDELLEWGQVFINL AGK
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI290463102, Length=483, Percent_Identity=24.4306418219462, Blast_Score=112, Evalue=6e-25, Organism=Homo sapiens, GI21361621, Length=476, Percent_Identity=24.5798319327731, Blast_Score=112, Evalue=8e-25, Organism=Homo sapiens, GI133922562, Length=476, Percent_Identity=23.7394957983193, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI290463104, Length=333, Percent_Identity=24.3243243243243, Blast_Score=86, Evalue=1e-16, Organism=Escherichia coli, GI1789566, Length=475, Percent_Identity=22.5263157894737, Blast_Score=81, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17535441, Length=524, Percent_Identity=24.236641221374, Blast_Score=120, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6323752, Length=399, Percent_Identity=25.31328320802, Blast_Score=103, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6322722, Length=492, Percent_Identity=24.7967479674797, Blast_Score=97, Evalue=5e-21, Organism=Saccharomyces cerevisiae, GI6323934, Length=408, Percent_Identity=24.5098039215686, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI17864244, Length=546, Percent_Identity=23.8095238095238, Blast_Score=119, Evalue=6e-27, Organism=Drosophila melanogaster, GI20129809, Length=531, Percent_Identity=23.9171374764595, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24651977, Length=423, Percent_Identity=25.2955082742317, Blast_Score=76, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.10 [H]
Molecular weight: Translated: 54778; Mature: 54647
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGETLDNIKFGTDGWRGIIGFDFNISNLSRVVVAACQELHYQFHKEVNSKKILIGYDRR CCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCH FMAIEFAKQIVPFVKGCGFEPILSNSFVTTPSCSFYAKEMNCLGALVITASHNPYNWLGL HHHHHHHHHHHHHHHCCCCCCHHCCCEECCCCCHHHHHHHHCCEEEEEEECCCCCEEEEE KIKSFNGCSVDESFTTEIEKRLMLGNAIDKLEDSYEIADVKKLHLDRIKSLFDIEFIANQ EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH LKKMNMRIFVDSMHGSAAKCIAEIFGGNDSEVVSEIREDADPFFGGNPPEPLLNYLDDLN HHHCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH ETLIKNSKNEVKTLGIIFDGDGDRIAAIDEKGRYCSTQDLLPYFISYLGEINHNSYPVLK HHHHHCCCCCEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEE TVSGSDIIKNISESQNRDVFELPVGFKYIAEKMIKEKIFIGGEESGGVGFGNFMPERDAL ECCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCHHHH YAAIVLLNGIAEKSQYLYETLDEIQKDFGPSVYKRIDIKFPNQSEKNNVKEFIIDNIPEN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCCCCCHHHHHHHHCCCCC INNHKLKSISKIDGIKLRIDKNFWLLFRFSGTEPLLRLYCEAPKESYLDELLEWGQVFIN CCCHHHHHHHHCCCEEEEEECCEEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHE LAGK ECCC >Mature Secondary Structure AGETLDNIKFGTDGWRGIIGFDFNISNLSRVVVAACQELHYQFHKEVNSKKILIGYDRR CCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCH FMAIEFAKQIVPFVKGCGFEPILSNSFVTTPSCSFYAKEMNCLGALVITASHNPYNWLGL HHHHHHHHHHHHHHHCCCCCCHHCCCEECCCCCHHHHHHHHCCEEEEEEECCCCCEEEEE KIKSFNGCSVDESFTTEIEKRLMLGNAIDKLEDSYEIADVKKLHLDRIKSLFDIEFIANQ EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH LKKMNMRIFVDSMHGSAAKCIAEIFGGNDSEVVSEIREDADPFFGGNPPEPLLNYLDDLN HHHCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH ETLIKNSKNEVKTLGIIFDGDGDRIAAIDEKGRYCSTQDLLPYFISYLGEINHNSYPVLK HHHHHCCCCCEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEE TVSGSDIIKNISESQNRDVFELPVGFKYIAEKMIKEKIFIGGEESGGVGFGNFMPERDAL ECCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCHHHH YAAIVLLNGIAEKSQYLYETLDEIQKDFGPSVYKRIDIKFPNQSEKNNVKEFIIDNIPEN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCCCCCHHHHHHHHCCCCC INNHKLKSISKIDGIKLRIDKNFWLLFRFSGTEPLLRLYCEAPKESYLDELLEWGQVFIN CCCHHHHHHHHCCCEEEEEECCEEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHE LAGK ECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]