Click here to switch to the map view.

The map label for this gene is 78778663

Identifier: 78778663

GI number: 78778663

Start: 265688

End: 266524

Strand: Direct

Name: 78778663

Synonym: PMT9312_0278

Alternate gene names: NA

Gene position: 265688-266524 (Clockwise)

Preceding gene: 78778662

Following gene: 78778665

Centisome position: 15.54

GC content: 26.16

Gene sequence:

>837_bases
ATGCAAGATTTAGAAAAAAATTTTTGGCTTGAAACATTTGATTGTTTTTCTGTTTCTGGAAAAGATGCTAAAAAATTTTT
AAATGGAATTACTACAGGCAATATTTTAAATTCAGAAAATAAAGTTACTAAGACTTGTTGGTTAACTCCAACTGGAATTT
TAAGGTCACTAATTGAGATTATTTTTTTAGAAAAAAGCTTAGAAGTAATTATCTTAGCCGGCAACATAAATGAAATAATT
GATTATTTTAATCAAATAATTTTCCCAGCTGATGATGTACTTATAAGTGAACCTTTCTCGATAAATAGAATTCAGGAAAT
TGATGAAATTAGTTCATGGAGGACTTACCAACCTATTTTCTTTAAGAAAAATGATAAAGAATTTGAAATATATAAAAATA
AACTAAATTTGTTGAATTCTAATGATTTAAAACTTTGGAAGGTTAATCAGGCTATACCCTCCTTAGATATGGAAATTAAT
GGGAAAAATAATCCTCTTGAGTTGGGATTGCAAGATCTTATAGACTTTAATAAAGGCTGCTTCTTAGGACAAGAAACAAT
GTCAAAAATAAAAAACGTTTCTTCTTTAAAACAGGAAATAAGAGTTTGGCAATCATTTGATTCTAATTTGAATTTCGAAT
ATGAAGATAAAAATTTATATACAAATCCTGCCAAAGAAAATTCTGTCGGCGTAATAACTAGTATTCACAAATCTGATCAT
CATATAAAAGGCTTAGCTATGATAAAAAAGAAATATTTAGAAGAGGTAAGTTATTTTTATTCAGAAATTTTTGGAAAAGT
TATTATAAATAAATCTGTAGGATCAATTTTCCTTTAA

Upstream 100 bases:

>100_bases
TTGTTGATAGACAAGAAGGAGGATATGAAGCTCTTGATGATGAAAATGTTAAATTAAAGAGTCTTTTTACAATAAACGAC
TTTTTATAATTTTTTTTAAG

Downstream 100 bases:

>100_bases
TTTTTTTTTAACTGATTTTTGAATAAAAATTTTGCAATATGTAGTGTAGCTAAACAATCATCTTTATTATATTTGATAAT
TTTTTTTAAAAATACTTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: Aminomethyltransferase; Aminomethyltransferase GcvT-Like Protein; Glycine Cleavage T-Protein Superfamily Protein

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MQDLEKNFWLETFDCFSVSGKDAKKFLNGITTGNILNSENKVTKTCWLTPTGILRSLIEIIFLEKSLEVIILAGNINEII
DYFNQIIFPADDVLISEPFSINRIQEIDEISSWRTYQPIFFKKNDKEFEIYKNKLNLLNSNDLKLWKVNQAIPSLDMEIN
GKNNPLELGLQDLIDFNKGCFLGQETMSKIKNVSSLKQEIRVWQSFDSNLNFEYEDKNLYTNPAKENSVGVITSIHKSDH
HIKGLAMIKKKYLEEVSYFYSEIFGKVIINKSVGSIFL

Sequences:

>Translated_278_residues
MQDLEKNFWLETFDCFSVSGKDAKKFLNGITTGNILNSENKVTKTCWLTPTGILRSLIEIIFLEKSLEVIILAGNINEII
DYFNQIIFPADDVLISEPFSINRIQEIDEISSWRTYQPIFFKKNDKEFEIYKNKLNLLNSNDLKLWKVNQAIPSLDMEIN
GKNNPLELGLQDLIDFNKGCFLGQETMSKIKNVSSLKQEIRVWQSFDSNLNFEYEDKNLYTNPAKENSVGVITSIHKSDH
HIKGLAMIKKKYLEEVSYFYSEIFGKVIINKSVGSIFL
>Mature_278_residues
MQDLEKNFWLETFDCFSVSGKDAKKFLNGITTGNILNSENKVTKTCWLTPTGILRSLIEIIFLEKSLEVIILAGNINEII
DYFNQIIFPADDVLISEPFSINRIQEIDEISSWRTYQPIFFKKNDKEFEIYKNKLNLLNSNDLKLWKVNQAIPSLDMEIN
GKNNPLELGLQDLIDFNKGCFLGQETMSKIKNVSSLKQEIRVWQSFDSNLNFEYEDKNLYTNPAKENSVGVITSIHKSDH
HIKGLAMIKKKYLEEVSYFYSEIFGKVIINKSVGSIFL

Specific function: Unknown

COG id: COG0354

COG function: function code R; Predicted aminomethyltransferase related to GcvT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32105; Mature: 32105

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDLEKNFWLETFDCFSVSGKDAKKFLNGITTGNILNSENKVTKTCWLTPTGILRSLIEI
CCCCCHHCCEEEEEEECCCCHHHHHHHHCCCCCCEECCCCCEEEEEECCHHHHHHHHHHH
IFLEKSLEVIILAGNINEIIDYFNQIIFPADDVLISEPFSINRIQEIDEISSWRTYQPIF
HHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCEE
FKKNDKEFEIYKNKLNLLNSNDLKLWKVNQAIPSLDMEINGKNNPLELGLQDLIDFNKGC
EECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEECCCCCCHHHCHHHHHCCCCCC
FLGQETMSKIKNVSSLKQEIRVWQSFDSNLNFEYEDKNLYTNPAKENSVGVITSIHKSDH
EECHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCC
HIKGLAMIKKKYLEEVSYFYSEIFGKVIINKSVGSIFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MQDLEKNFWLETFDCFSVSGKDAKKFLNGITTGNILNSENKVTKTCWLTPTGILRSLIEI
CCCCCHHCCEEEEEEECCCCHHHHHHHHCCCCCCEECCCCCEEEEEECCHHHHHHHHHHH
IFLEKSLEVIILAGNINEIIDYFNQIIFPADDVLISEPFSINRIQEIDEISSWRTYQPIF
HHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCEE
FKKNDKEFEIYKNKLNLLNSNDLKLWKVNQAIPSLDMEINGKNNPLELGLQDLIDFNKGC
EECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEECCCCCCHHHCHHHHHCCCCCC
FLGQETMSKIKNVSSLKQEIRVWQSFDSNLNFEYEDKNLYTNPAKENSVGVITSIHKSDH
EECHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCC
HIKGLAMIKKKYLEEVSYFYSEIFGKVIINKSVGSIFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA