Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
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Accession | NC_007577 |
Length | 1,709,204 |
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The map label for this gene is 78778655
Identifier: 78778655
GI number: 78778655
Start: 258670
End: 259038
Strand: Reverse
Name: 78778655
Synonym: PMT9312_0270
Alternate gene names: NA
Gene position: 259038-258670 (Counterclockwise)
Preceding gene: 78778657
Following gene: 78778653
Centisome position: 15.16
GC content: 35.23
Gene sequence:
>369_bases ATGTCAAAAAAAAGAAAAAGAATCAGCAGAAGAAGATTGGCTGGCCAAAGGGTAATGGCACATGTACCTATTTATCATAT CGAAACTGGCAAACATAAACCAGTTACAGCAGCAAGAAGATTCATAGCTGAAAATGGTCTCTCTGCGCCTTCAGTTTTCA ATGTCCGAAGAAATGAACATACCACTGATAGGTTTTTTTGGGGTGAAAAAGGATTATTTAGCGCCCAATATGCTGAAGAA AATCATTTTTTATTTCCATCACTAAAATTCGTAGTTGAAGGAATTGGTGAAGAAAAAATATTTGAGGGTCTAGAACTTAC TGCAGATGATTGGGAAGAAATTGAAGAATACGAATATGCTTTTGTTTAA
Upstream 100 bases:
>100_bases GGGTCCTCTATGTAATTTGAAGTGAATTCAAAATCACAGATATAAGATTAGTAAAAATAAATAAGACTAATCTCATTAAT AATTTCAGGAGTACCAATCA
Downstream 100 bases:
>100_bases AAAATATTATTTATATTTGAACTTATAAAATTAATTAAATTTGAATCAATTTGATGGAATCCATCGAATTCTAATAATTC GCAAAATTTAGAAGACTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MSKKRKRISRRRLAGQRVMAHVPIYHIETGKHKPVTAARRFIAENGLSAPSVFNVRRNEHTTDRFFWGEKGLFSAQYAEE NHFLFPSLKFVVEGIGEEKIFEGLELTADDWEEIEEYEYAFV
Sequences:
>Translated_122_residues MSKKRKRISRRRLAGQRVMAHVPIYHIETGKHKPVTAARRFIAENGLSAPSVFNVRRNEHTTDRFFWGEKGLFSAQYAEE NHFLFPSLKFVVEGIGEEKIFEGLELTADDWEEIEEYEYAFV >Mature_121_residues SKKRKRISRRRLAGQRVMAHVPIYHIETGKHKPVTAARRFIAENGLSAPSVFNVRRNEHTTDRFFWGEKGLFSAQYAEEN HFLFPSLKFVVEGIGEEKIFEGLELTADDWEEIEEYEYAFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14291; Mature: 14160
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKRKRISRRRLAGQRVMAHVPIYHIETGKHKPVTAARRFIAENGLSAPSVFNVRRNEH CCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCC TTDRFFWGEKGLFSAQYAEENHFLFPSLKFVVEGIGEEKIFEGLELTADDWEEIEEYEYA CCCCEECCCCCCCCCCCCCCCCEECHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHC FV CC >Mature Secondary Structure SKKRKRISRRRLAGQRVMAHVPIYHIETGKHKPVTAARRFIAENGLSAPSVFNVRRNEH CHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCC TTDRFFWGEKGLFSAQYAEENHFLFPSLKFVVEGIGEEKIFEGLELTADDWEEIEEYEYA CCCCEECCCCCCCCCCCCCCCCEECHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHC FV CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA