| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is sfsA [H]
Identifier: 78778649
GI number: 78778649
Start: 252129
End: 252869
Strand: Direct
Name: sfsA [H]
Synonym: PMT9312_0264
Alternate gene names: 78778649
Gene position: 252129-252869 (Clockwise)
Preceding gene: 78778647
Following gene: 78778650
Centisome position: 14.75
GC content: 32.52
Gene sequence:
>741_bases ATGAATGATCGGATAATTGAATTTGATCCATTAATTGAAGGGGTTTTAATTAATAGATATAAAAGGTTTCTTGCTGATAT TGAATTAGAGACTGGAGAGGTAGTAACTGCTCATTGTGCTAATACAGGACCAATGAAAGGACTTTTGACCGAGGGAGCAA AAGTAAGAATGAGTGTTTCCCCTTCTCCTAAAAGAAAATTACCTTTTACTTGGGAACAGATATGTGTTTTAGATGCAAAA AATGAGGAGGTTTGGGTTGGAATTAATACCCTATTTGCAAATAAGTTGATCAAAAAGGTTATTGAGAAAAATTTGTTAAA CGAAATAATTGGAGAAATAGAGACAATTAAAGCTGAAGTGCCTTATGGAAAAGATAAAAAAAGCAGAATTGACTTTTTTT TAACTCCAAAATCTTCAAATCCTGATAAACGTAACATATATATAGAGGTTAAAAATACGACCTGGATGAAAGGAAATGTA GCTCTATTCCCAGATACAGTAACGAAAAGAGGTCAAAAACACCTTATAGAATTAAAGGAATTAATTCCTGCAAGTAAAAG TATTTTAATACTTTGTATTACGAGAAAAGACGCTTGTTTCTTTTCCCCTGGAGATGATGCAGATCCCTTATATGGCAATC TTTTTAGAGAATCTTTTAGTGCAGGTATGATACCAATCCCATGCTCGTTTGAATTTCACAAAGACCACATAACATGGAAT GGAATTAAACCTTTGAAATAA
Upstream 100 bases:
>100_bases AAACATTATTTTTAAAAAATGAATGCATTTGGCTATATCAAAAATTTTTCAATAAGATTAAGTTTCAATTATATTTGATT TTTAAATAACGACATATTTT
Downstream 100 bases:
>100_bases ATTAAAAACTTGATATTTTGAAATTAATAAAAAAAATTTTTTAATTTAACAAATATAAATTTAGGATGCAACTATAAAAT TGGTAGCAACGACTACTAGA
Product: sugar fermentation stimulation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MNDRIIEFDPLIEGVLINRYKRFLADIELETGEVVTAHCANTGPMKGLLTEGAKVRMSVSPSPKRKLPFTWEQICVLDAK NEEVWVGINTLFANKLIKKVIEKNLLNEIIGEIETIKAEVPYGKDKKSRIDFFLTPKSSNPDKRNIYIEVKNTTWMKGNV ALFPDTVTKRGQKHLIELKELIPASKSILILCITRKDACFFSPGDDADPLYGNLFRESFSAGMIPIPCSFEFHKDHITWN GIKPLK
Sequences:
>Translated_246_residues MNDRIIEFDPLIEGVLINRYKRFLADIELETGEVVTAHCANTGPMKGLLTEGAKVRMSVSPSPKRKLPFTWEQICVLDAK NEEVWVGINTLFANKLIKKVIEKNLLNEIIGEIETIKAEVPYGKDKKSRIDFFLTPKSSNPDKRNIYIEVKNTTWMKGNV ALFPDTVTKRGQKHLIELKELIPASKSILILCITRKDACFFSPGDDADPLYGNLFRESFSAGMIPIPCSFEFHKDHITWN GIKPLK >Mature_246_residues MNDRIIEFDPLIEGVLINRYKRFLADIELETGEVVTAHCANTGPMKGLLTEGAKVRMSVSPSPKRKLPFTWEQICVLDAK NEEVWVGINTLFANKLIKKVIEKNLLNEIIGEIETIKAEVPYGKDKKSRIDFFLTPKSSNPDKRNIYIEVKNTTWMKGNV ALFPDTVTKRGQKHLIELKELIPASKSILILCITRKDACFFSPGDDADPLYGNLFRESFSAGMIPIPCSFEFHKDHITWN GIKPLK
Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]
COG id: COG1489
COG function: function code R; DNA-binding protein, stimulates sugar fermentation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sfsA family [H]
Homologues:
Organism=Escherichia coli, GI1786340, Length=223, Percent_Identity=40.3587443946188, Blast_Score=142, Evalue=2e-35,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005224 [H]
Pfam domain/function: PF03749 SfsA [H]
EC number: NA
Molecular weight: Translated: 27923; Mature: 27923
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDRIIEFDPLIEGVLINRYKRFLADIELETGEVVTAHCANTGPMKGLLTEGAKVRMSVS CCCCEEEECHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCCCHHCCCCCEEEEEEC PSPKRKLPFTWEQICVLDAKNEEVWVGINTLFANKLIKKVIEKNLLNEIIGEIETIKAEV CCCCCCCCCCHHHEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC PYGKDKKSRIDFFLTPKSSNPDKRNIYIEVKNTTWMKGNVALFPDTVTKRGQKHLIELKE CCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCEEEECCEEECCHHHHHCHHHHHHHHHH LIPASKSILILCITRKDACFFSPGDDADPLYGNLFRESFSAGMIPIPCSFEFHKDHITWN HCCCCCCEEEEEEECCCCEEECCCCCCCCHHHHHHHHHHCCCCEECCCCCEECCCEEEEC GIKPLK CCCCCC >Mature Secondary Structure MNDRIIEFDPLIEGVLINRYKRFLADIELETGEVVTAHCANTGPMKGLLTEGAKVRMSVS CCCCEEEECHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCCCHHCCCCCEEEEEEC PSPKRKLPFTWEQICVLDAKNEEVWVGINTLFANKLIKKVIEKNLLNEIIGEIETIKAEV CCCCCCCCCCHHHEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC PYGKDKKSRIDFFLTPKSSNPDKRNIYIEVKNTTWMKGNVALFPDTVTKRGQKHLIELKE CCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCEEEECCEEECCHHHHHCHHHHHHHHHH LIPASKSILILCITRKDACFFSPGDDADPLYGNLFRESFSAGMIPIPCSFEFHKDHITWN HCCCCCCEEEEEEECCCCEEECCCCCCCCHHHHHHHHHHCCCCEECCCCCEECCCEEEEC GIKPLK CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA