Click here to switch to the map view.

The map label for this gene is 78778647

Identifier: 78778647

GI number: 78778647

Start: 250186

End: 250476

Strand: Direct

Name: 78778647

Synonym: PMT9312_0262

Alternate gene names: NA

Gene position: 250186-250476 (Clockwise)

Preceding gene: 78778646

Following gene: 78778649

Centisome position: 14.64

GC content: 28.52

Gene sequence:

>291_bases
ATGGACTCTCAGATAAGCATAAGTGATCTAGAAAATATTATTTCAGAAAAGGTTTATATAAAAATAGAAAAGTGGAATTT
ATATCTTGGAGATGCTGGCCTAGCTAGAAATCTTGCTATTGAATGTATAAGCAATAAAGATCAAGGCACATTAGAGGCTG
CAAAAATAAGTTTGAAAGCAATTAATGTAAAAGTAGGAGATGGACTTAAAAGTATTCCACTTATTAATTTAATAACTTCC
GCACAAATTCTTGAATTAGAGGAAATTTTGGAAAGTTTTTTTAATAACTAA

Upstream 100 bases:

>100_bases
GCTATTTTCTGGTCAATTCTTTTAGCTTCCCACTTAATTTTTGTAATTATAAAAAAACCCAGAGATTTAGAAAAACAATC
AACTTAAATCAATTTTATTT

Downstream 100 bases:

>100_bases
ATCTTTTTTTGATAAATTTTAAATTTATTTACGTTCAAACATTTTGTAAGTAAAAAATAAATTACAAAAAAAGTTAGAGA
TCCAAATATTAATAATAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MDSQISISDLENIISEKVYIKIEKWNLYLGDAGLARNLAIECISNKDQGTLEAAKISLKAINVKVGDGLKSIPLINLITS
AQILELEEILESFFNN

Sequences:

>Translated_96_residues
MDSQISISDLENIISEKVYIKIEKWNLYLGDAGLARNLAIECISNKDQGTLEAAKISLKAINVKVGDGLKSIPLINLITS
AQILELEEILESFFNN
>Mature_96_residues
MDSQISISDLENIISEKVYIKIEKWNLYLGDAGLARNLAIECISNKDQGTLEAAKISLKAINVKVGDGLKSIPLINLITS
AQILELEEILESFFNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10607; Mature: 10607

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSQISISDLENIISEKVYIKIEKWNLYLGDAGLARNLAIECISNKDQGTLEAAKISLKA
CCCCCCHHHHHHHHCCEEEEEEEEEEEEECCCCCHHHEEEEEECCCCCCCEEEHEEEEEE
INVKVGDGLKSIPLINLITSAQILELEEILESFFNN
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDSQISISDLENIISEKVYIKIEKWNLYLGDAGLARNLAIECISNKDQGTLEAAKISLKA
CCCCCCHHHHHHHHCCEEEEEEEEEEEEECCCCCHHHEEEEEECCCCCCCEEEHEEEEEE
INVKVGDGLKSIPLINLITSAQILELEEILESFFNN
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA