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The map label for this gene is cinA [C]

Identifier: 78778644

GI number: 78778644

Start: 247140

End: 248414

Strand: Reverse

Name: cinA [C]

Synonym: PMT9312_0259

Alternate gene names: 78778644

Gene position: 248414-247140 (Counterclockwise)

Preceding gene: 78778645

Following gene: 78778643

Centisome position: 14.53

GC content: 32.78

Gene sequence:

>1275_bases
ATGACTTCTAATTCCAAAGGAGTTGAAATTCTTTCTATTGGAACAGAGCTACTTTTAGGAAATATTGTAAATACAAATGC
TAAATGGATTTCTGAGCAGTTGTCTCAATTAGGCTTAAATCACTTTAGACAATCAACTGTAGGTGATAATTGTGATCGAA
TTATAAAAGTAATTCAAGAAATTTCTCAAAGAAGTAATCTTCTAATTACAACCGGTGGCTTGGGACCTACCCCAGATGAC
TTAACTACTGAGGCAATAGCAAAGTCTTTTAATGTATCTCTTTTTGAAAAAGAGTACTTATGGGATGAAATAAAGCAAAA
ACTTTCAAATTCAAAGCTCCAGGACAATTATTCTAGCTTAAGGAAACAATGTTTCTTCCCTAAAAATGCGCAAATAATTA
ATAACCCTAGGGGTACTGCCCCAGGAATGATATGGGAACCAATTAAAGGATTTACTATTCTTACTTTCCCTGGTGTACCC
AGTGAAATGAAAACTATGTGGGAAGAAACTGCATTAGATTTCATTAAAAACAAATTCTCAGATAGTTATTCTTTCTTTTC
AAATACTCTTAAATTCTCAGGCATTGGAGAATCAACCGTCGCAGAAAAAATTAACGATCTTTTAAATCTTAAGAACCCGA
CTGTTGCTCCTTATGCAAACTTGGGAGAGGTTAAACTCAGAATCACTGCCAGAGCTAAGAGTGAAGTGGAAGCAAATAAT
TTAATTAACCCTGTAAAAGAAAAATTAAAAAAAGAATTTTCGAACTTTATTTTTGGAGAAAATCACGATACTCTCCCAGG
CGTTTTAATAAAAGAATTAGCCAAAAGAAACGAAACTATTGTTTTTGCTGAATCCTGTACAGGAGGTCTACTATCTTCAT
CAATCACATCAATATCAGGCTCTTCACAAGTTTTTCTTGGTAGTATTGTTACTTATAGTAATGATTTAAAAAATTCATTA
TTAAATATTTCCGAAGAAAAACTTAAAAAATATGGAGCTGTTTCCGAAAAAGTTTGTCAAGCTATGGCTACTAATGTCAA
AGAAAAATTAGAAGCAGATTGGGCAATAGCGATCAGTGGAATAGCTGGACCTAACGGAGGATGTAAAGAAAAACCTGTTG
GACTAGTTCATATCTCAATTTCAGGACCGAATAATCATATTACTAATATCAAAAAAACATTTAACTCAACCCGAAATAGA
ATAGAAATTCAAACACTAAGTGTAAATGTGTGTTTGAACAGCCTCAGATTAATCCTATTATCGAAGAGAAAGTAA

Upstream 100 bases:

>100_bases
ATCCAAATGATTCAGTGATTGAAAGTCAATGTAAGGACAAAGTATTAGCTTTATGTAATCGTTTTCCTCTTTATGAAGGC
AAACTTGAAGCATCAATTAA

Downstream 100 bases:

>100_bases
CTTTTTTACAAATTGAGTCAAAATACCTTATTTGATAAAGTTTGGGATTTACACAAAGTTTCTAGTCTACCTGGTGGCTC
AGATCAAATTTTTATTGGTC

Product: competence/damage-inducible protein cinA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MTSNSKGVEILSIGTELLLGNIVNTNAKWISEQLSQLGLNHFRQSTVGDNCDRIIKVIQEISQRSNLLITTGGLGPTPDD
LTTEAIAKSFNVSLFEKEYLWDEIKQKLSNSKLQDNYSSLRKQCFFPKNAQIINNPRGTAPGMIWEPIKGFTILTFPGVP
SEMKTMWEETALDFIKNKFSDSYSFFSNTLKFSGIGESTVAEKINDLLNLKNPTVAPYANLGEVKLRITARAKSEVEANN
LINPVKEKLKKEFSNFIFGENHDTLPGVLIKELAKRNETIVFAESCTGGLLSSSITSISGSSQVFLGSIVTYSNDLKNSL
LNISEEKLKKYGAVSEKVCQAMATNVKEKLEADWAIAISGIAGPNGGCKEKPVGLVHISISGPNNHITNIKKTFNSTRNR
IEIQTLSVNVCLNSLRLILLSKRK

Sequences:

>Translated_424_residues
MTSNSKGVEILSIGTELLLGNIVNTNAKWISEQLSQLGLNHFRQSTVGDNCDRIIKVIQEISQRSNLLITTGGLGPTPDD
LTTEAIAKSFNVSLFEKEYLWDEIKQKLSNSKLQDNYSSLRKQCFFPKNAQIINNPRGTAPGMIWEPIKGFTILTFPGVP
SEMKTMWEETALDFIKNKFSDSYSFFSNTLKFSGIGESTVAEKINDLLNLKNPTVAPYANLGEVKLRITARAKSEVEANN
LINPVKEKLKKEFSNFIFGENHDTLPGVLIKELAKRNETIVFAESCTGGLLSSSITSISGSSQVFLGSIVTYSNDLKNSL
LNISEEKLKKYGAVSEKVCQAMATNVKEKLEADWAIAISGIAGPNGGCKEKPVGLVHISISGPNNHITNIKKTFNSTRNR
IEIQTLSVNVCLNSLRLILLSKRK
>Mature_423_residues
TSNSKGVEILSIGTELLLGNIVNTNAKWISEQLSQLGLNHFRQSTVGDNCDRIIKVIQEISQRSNLLITTGGLGPTPDDL
TTEAIAKSFNVSLFEKEYLWDEIKQKLSNSKLQDNYSSLRKQCFFPKNAQIINNPRGTAPGMIWEPIKGFTILTFPGVPS
EMKTMWEETALDFIKNKFSDSYSFFSNTLKFSGIGESTVAEKINDLLNLKNPTVAPYANLGEVKLRITARAKSEVEANNL
INPVKEKLKKEFSNFIFGENHDTLPGVLIKELAKRNETIVFAESCTGGLLSSSITSISGSSQVFLGSIVTYSNDLKNSLL
NISEEKLKKYGAVSEKVCQAMATNVKEKLEADWAIAISGIAGPNGGCKEKPVGLVHISISGPNNHITNIKKTFNSTRNRI
EIQTLSVNVCLNSLRLILLSKRK

Specific function: Unknown

COG id: COG1058

COG function: function code R; Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family

Homologues:

Organism=Escherichia coli, GI1788583, Length=331, Percent_Identity=30.8157099697885, Blast_Score=138, Evalue=6e-34,
Organism=Escherichia coli, GI1789052, Length=137, Percent_Identity=40.1459854014599, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1787818, Length=122, Percent_Identity=36.8852459016393, Blast_Score=82, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI71993966, Length=289, Percent_Identity=23.8754325259516, Blast_Score=68, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI71993974, Length=289, Percent_Identity=23.8754325259516, Blast_Score=68, Evalue=9e-12,
Organism=Saccharomyces cerevisiae, GI6323832, Length=162, Percent_Identity=27.1604938271605, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CINAL_PROM9 (Q31CS5)

Other databases:

- EMBL:   CP000111
- RefSeq:   YP_396756.1
- ProteinModelPortal:   Q31CS5
- SMR:   Q31CS5
- STRING:   Q31CS5
- GeneID:   3765045
- GenomeReviews:   CP000111_GR
- KEGG:   pmi:PMT9312_0259
- eggNOG:   COG1058
- HOGENOM:   HBG449871
- OMA:   NPTVAPY
- ProtClustDB:   CLSK921788
- BioCyc:   PMAR74546:PMT9312_0259-MONOMER
- HAMAP:   MF_00226_B
- InterPro:   IPR008136
- InterPro:   IPR008135
- InterPro:   IPR001453
- Gene3D:   G3DSA:3.40.980.10
- PIRSF:   PIRSF006728
- SMART:   SM00852
- TIGRFAMs:   TIGR00199
- TIGRFAMs:   TIGR00200

Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth; SSF53218 MoCF_biosynth

EC number: NA

Molecular weight: Translated: 46742; Mature: 46611

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSNSKGVEILSIGTELLLGNIVNTNAKWISEQLSQLGLNHFRQSTVGDNCDRIIKVIQE
CCCCCCCEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ISQRSNLLITTGGLGPTPDDLTTEAIAKSFNVSLFEKEYLWDEIKQKLSNSKLQDNYSSL
HHHCCCEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
RKQCFFPKNAQIINNPRGTAPGMIWEPIKGFTILTFPGVPSEMKTMWEETALDFIKNKFS
HHHHCCCCCCCEECCCCCCCCCCEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHC
DSYSFFSNTLKFSGIGESTVAEKINDLLNLKNPTVAPYANLGEVKLRITARAKSEVEANN
CHHHHHHHCEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHH
LINPVKEKLKKEFSNFIFGENHDTLPGVLIKELAKRNETIVFAESCTGGLLSSSITSISG
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCC
SSQVFLGSIVTYSNDLKNSLLNISEEKLKKYGAVSEKVCQAMATNVKEKLEADWAIAISG
CCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEC
IAGPNGGCKEKPVGLVHISISGPNNHITNIKKTFNSTRNRIEIQTLSVNVCLNSLRLILL
CCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCEEEEEEEEHHHHHHHHHHHHE
SKRK
ECCC
>Mature Secondary Structure 
TSNSKGVEILSIGTELLLGNIVNTNAKWISEQLSQLGLNHFRQSTVGDNCDRIIKVIQE
CCCCCCEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ISQRSNLLITTGGLGPTPDDLTTEAIAKSFNVSLFEKEYLWDEIKQKLSNSKLQDNYSSL
HHHCCCEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
RKQCFFPKNAQIINNPRGTAPGMIWEPIKGFTILTFPGVPSEMKTMWEETALDFIKNKFS
HHHHCCCCCCCEECCCCCCCCCCEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHC
DSYSFFSNTLKFSGIGESTVAEKINDLLNLKNPTVAPYANLGEVKLRITARAKSEVEANN
CHHHHHHHCEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHH
LINPVKEKLKKEFSNFIFGENHDTLPGVLIKELAKRNETIVFAESCTGGLLSSSITSISG
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCC
SSQVFLGSIVTYSNDLKNSLLNISEEKLKKYGAVSEKVCQAMATNVKEKLEADWAIAISG
CCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEC
IAGPNGGCKEKPVGLVHISISGPNNHITNIKKTFNSTRNRIEIQTLSVNVCLNSLRLILL
CCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCEEEEEEEEHHHHHHHHHHHHE
SKRK
ECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA