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The map label for this gene is ybaB [C]

Identifier: 78778405

GI number: 78778405

Start: 21314

End: 21664

Strand: Reverse

Name: ybaB [C]

Synonym: PMT9312_0020

Alternate gene names: 78778405

Gene position: 21664-21314 (Counterclockwise)

Preceding gene: 78778406

Following gene: 78778399

Centisome position: 1.27

GC content: 30.77

Gene sequence:

>351_bases
ATGGCGGGTTTTGGACTTCCTAACTTTGGACAACTTACAGAAGCTTTTAAAAAAGCTAAACAAATTCAACAAGATGCTCA
AAAATTACAAGATGAACTTGAAAATATGGAAATTGAAGGGGAAAGTGATGATGAAATGGTAAAAGTTTGGATAAGTGGCA
ACCAACTTCCTTTAAGGGTAGAAGTTCAAGAAAATATTTTAAATTCAGATAAAGAAAAAATAGAGCAAAATATTTTACAA
GCTATTCAAAAAGCTCATGAATTATCTACTACAACGATGAAAGAAAGAATGAATGATTTGACTGGTGGTTTAAATCTTAA
TCTTCCTGGTTTTGATAATACTGACTCTTAG

Upstream 100 bases:

>100_bases
TAATTCAACAAAAAGTACTACAAAACAAAGGAATTTATTTGCAACCAGAAGTAAGAATGATTGGTTTTGACTATCCTAAT
TAAAGAAACTTTTTTAAAAA

Downstream 100 bases:

>100_bases
AAGATTCAATCATTTCTTTATAAAAAGAATATCTTTCAAAAGATTTATTTAAATTACAGCCCTCATCATTCAAATGTAAG
CAGTTACGAAATTTACACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MAGFGLPNFGQLTEAFKKAKQIQQDAQKLQDELENMEIEGESDDEMVKVWISGNQLPLRVEVQENILNSDKEKIEQNILQ
AIQKAHELSTTTMKERMNDLTGGLNLNLPGFDNTDS

Sequences:

>Translated_116_residues
MAGFGLPNFGQLTEAFKKAKQIQQDAQKLQDELENMEIEGESDDEMVKVWISGNQLPLRVEVQENILNSDKEKIEQNILQ
AIQKAHELSTTTMKERMNDLTGGLNLNLPGFDNTDS
>Mature_115_residues
AGFGLPNFGQLTEAFKKAKQIQQDAQKLQDELENMEIEGESDDEMVKVWISGNQLPLRVEVQENILNSDKEKIEQNILQA
IQKAHELSTTTMKERMNDLTGGLNLNLPGFDNTDS

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family [H]

Homologues:

Organism=Escherichia coli, GI1786677, Length=108, Percent_Identity=37.037037037037, Blast_Score=64, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004401 [H]

Pfam domain/function: PF02575 DUF149 [H]

EC number: NA

Molecular weight: Translated: 13078; Mature: 12947

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGFGLPNFGQLTEAFKKAKQIQQDAQKLQDELENMEIEGESDDEMVKVWISGNQLPLRV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEE
EVQENILNSDKEKIEQNILQAIQKAHELSTTTMKERMNDLTGGLNLNLPGFDNTDS
EHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGFGLPNFGQLTEAFKKAKQIQQDAQKLQDELENMEIEGESDDEMVKVWISGNQLPLRV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEE
EVQENILNSDKEKIEQNILQAIQKAHELSTTTMKERMNDLTGGLNLNLPGFDNTDS
EHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA