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The map label for this gene is ngr [H]

Identifier: 78358377

GI number: 78358377

Start: 3321223

End: 3321831

Strand: Reverse

Name: ngr [H]

Synonym: Dde_3337

Alternate gene names: 78358377

Gene position: 3321831-3321223 (Counterclockwise)

Preceding gene: 78358379

Following gene: 78358367

Centisome position: 89.05

GC content: 51.56

Gene sequence:

>609_bases
ATGAAGGTACGAGCTCAGATTCCCGGTGTGAAGAATGCCACAAATTTTAATGTGGTTGCAGACAGCAAAACGCCCGTGGG
CAGCACGCTTGAAAATTTGAAGGCAGCCATTGCAGGGGAAACCGCTGCATACACGAAGTACATGACGTTTGCCAAAGCAG
CCAGAGAACAGGGCTATGAACAGGCAGCCCGTCTTTTTGAAGCCACTGCGGCGGCGGAGCTGATCCATATTGATCTGGAA
TACACTCTGGTAGCACAAATGGATCCGGATTATGAAAAGCCCGCTGTGCAGGCTCCCGCCTCCTACTCCTGCGATCTTAA
TCTTATCTCCGGCGCCAACGGCGAGATATATGAAACCTCTGACATGTATCCGGCATTTATAAAAAAGGCGCAGGAAGAGG
GCAATAACAAGGCCGTTGCCGTGTTTACGCGGGCAAAGCTTGCAGAAGCCGTACATGCGGAACTCTATCTTGGTGCGTAC
AACGATCTTGACGCCCCGGACGACGACAGGTTTCACCTGTGCCCTGTGTGCGGATACATCCACAAAGGGGAAGACTTCGA
GAAGTGTCCCATCTGCTTCCGCCTCAAAGATTCTTTTACCGCATACTAG

Upstream 100 bases:

>100_bases
GAAGAAACGTTGACGTAAATTTATGGCAAAAGATATGGTTGCTGCCTGTGTGTACTATGTTTGTATTGTGAACAAACTGT
AACGACAGGAGAAAATTCAC

Downstream 100 bases:

>100_bases
GCAGTCTGCGCGACTGTTTTCCGGCCGGAAGATGCAGTGATTCTGCCGGTCTTACGGGCCGCCACGCTCCGGTTTGATTG
CCGGATCAGCGTGGCGGCGC

Product: nigerythrin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MKVRAQIPGVKNATNFNVVADSKTPVGSTLENLKAAIAGETAAYTKYMTFAKAAREQGYEQAARLFEATAAAELIHIDLE
YTLVAQMDPDYEKPAVQAPASYSCDLNLISGANGEIYETSDMYPAFIKKAQEEGNNKAVAVFTRAKLAEAVHAELYLGAY
NDLDAPDDDRFHLCPVCGYIHKGEDFEKCPICFRLKDSFTAY

Sequences:

>Translated_202_residues
MKVRAQIPGVKNATNFNVVADSKTPVGSTLENLKAAIAGETAAYTKYMTFAKAAREQGYEQAARLFEATAAAELIHIDLE
YTLVAQMDPDYEKPAVQAPASYSCDLNLISGANGEIYETSDMYPAFIKKAQEEGNNKAVAVFTRAKLAEAVHAELYLGAY
NDLDAPDDDRFHLCPVCGYIHKGEDFEKCPICFRLKDSFTAY
>Mature_202_residues
MKVRAQIPGVKNATNFNVVADSKTPVGSTLENLKAAIAGETAAYTKYMTFAKAAREQGYEQAARLFEATAAAELIHIDLE
YTLVAQMDPDYEKPAVQAPASYSCDLNLISGANGEIYETSDMYPAFIKKAQEEGNNKAVAVFTRAKLAEAVHAELYLGAY
NDLDAPDDDRFHLCPVCGYIHKGEDFEKCPICFRLKDSFTAY

Specific function: Exhibits NADH peroxidase activity (in vitro) [H]

COG id: COG1592

COG function: function code C; Rubrerythrin

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rubredoxin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR004039
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: NA

Molecular weight: Translated: 22184; Mature: 22184

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS50903 RUBREDOXIN_LIKE ; PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVRAQIPGVKNATNFNVVADSKTPVGSTLENLKAAIAGETAAYTKYMTFAKAAREQGYE
CCEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHH
QAARLFEATAAAELIHIDLEYTLVAQMDPDYEKPAVQAPASYSCDLNLISGANGEIYETS
HHHHHHHHHHHEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECC
DMYPAFIKKAQEEGNNKAVAVFTRAKLAEAVHAELYLGAYNDLDAPDDDRFHLCPVCGYI
CCCHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEHHHHHC
HKGEDFEKCPICFRLKDSFTAY
CCCCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MKVRAQIPGVKNATNFNVVADSKTPVGSTLENLKAAIAGETAAYTKYMTFAKAAREQGYE
CCEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHH
QAARLFEATAAAELIHIDLEYTLVAQMDPDYEKPAVQAPASYSCDLNLISGANGEIYETS
HHHHHHHHHHHEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECC
DMYPAFIKKAQEEGNNKAVAVFTRAKLAEAVHAELYLGAYNDLDAPDDDRFHLCPVCGYI
CCCHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEHHHHHC
HKGEDFEKCPICFRLKDSFTAY
CCCCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9226272; 8383040 [H]