| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358379
Identifier: 78358379
GI number: 78358379
Start: 3322147
End: 3322560
Strand: Reverse
Name: 78358379
Synonym: Dde_3339
Alternate gene names: NA
Gene position: 3322560-3322147 (Counterclockwise)
Preceding gene: 78358380
Following gene: 78358377
Centisome position: 89.07
GC content: 51.93
Gene sequence:
>414_bases ATGCCGGTGACATACACGGGAACATGTCTGTGCGGAACCGTGGCGTTTGAGGTCGAAGGGGAGTTTGAAAAATTTTACCT GTGTCACTGCGAGCGATGCAGGAAAGACTCAGGCTCCGCGCATGCTGCCAATTTATTTTCTTCTACGGCTGAATTGCGAT GGCTGGAAGGGGAAGAACATGTGCGGACATTTGATCTGGACGGACACATCAAAAGTTTCTGCAGCCGTTGCGGGTCTGCG TTACCGAATATTCAGATGGGCGGAACGCTGCTGGTGGTGCCTGCGGGCAGTCTGGACTGTGATGTTCCCATACGGCCCGA TGGTCATATTTTTTATGCGGACAAGGCAAATTGGGACACGGCACTGGAAAATGTAGCTGTTTTTGACAGGCTTCCGGAAG AGCCTGACAGTTGA
Upstream 100 bases:
>100_bases GCGTTGATTTCAGCGTCTCCGGTCTGGTATTTTTCCGGAAAAGCATGTTTTTTTACTTCAATATGACATTTTGATATGAA GGGTTGTATCCGAAGGAGGG
Downstream 100 bases:
>100_bases ATGCCGGTGAAAGCCGTGCAGCGTACAGCTGCGGTGGTGGCTGATCTGTCTCGATGCTTGTCGGAAGGCAGCGGCGTGCA TATGACCGTGTGATGCTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating Family; Glutathione-Dependent Formaldehyde-Activating Gfa; ATPase; Glutathione-Dependent Formaldehyde-Activating
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MPVTYTGTCLCGTVAFEVEGEFEKFYLCHCERCRKDSGSAHAANLFSSTAELRWLEGEEHVRTFDLDGHIKSFCSRCGSA LPNIQMGGTLLVVPAGSLDCDVPIRPDGHIFYADKANWDTALENVAVFDRLPEEPDS
Sequences:
>Translated_137_residues MPVTYTGTCLCGTVAFEVEGEFEKFYLCHCERCRKDSGSAHAANLFSSTAELRWLEGEEHVRTFDLDGHIKSFCSRCGSA LPNIQMGGTLLVVPAGSLDCDVPIRPDGHIFYADKANWDTALENVAVFDRLPEEPDS >Mature_136_residues PVTYTGTCLCGTVAFEVEGEFEKFYLCHCERCRKDSGSAHAANLFSSTAELRWLEGEEHVRTFDLDGHIKSFCSRCGSAL PNIQMGGTLLVVPAGSLDCDVPIRPDGHIFYADKANWDTALENVAVFDRLPEEPDS
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15106; Mature: 14975
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 5.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVTYTGTCLCGTVAFEVEGEFEKFYLCHCERCRKDSGSAHAANLFSSTAELRWLEGEEH CCEEECCCEEEEEEEEEECCCCCEEEEEHHHHHCCCCCCCHHHHHHHCCCEEEEECCCCC VRTFDLDGHIKSFCSRCGSALPNIQMGGTLLVVPAGSLDCDVPIRPDGHIFYADKANWDT EEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCHH ALENVAVFDRLPEEPDS HHHHHHHHHCCCCCCCC >Mature Secondary Structure PVTYTGTCLCGTVAFEVEGEFEKFYLCHCERCRKDSGSAHAANLFSSTAELRWLEGEEH CEEECCCEEEEEEEEEECCCCCEEEEEHHHHHCCCCCCCHHHHHHHCCCEEEEECCCCC VRTFDLDGHIKSFCSRCGSALPNIQMGGTLLVVPAGSLDCDVPIRPDGHIFYADKANWDT EEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCHH ALENVAVFDRLPEEPDS HHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA