| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355865
Identifier: 78355865
GI number: 78355865
Start: 839309
End: 839824
Strand: Direct
Name: 78355865
Synonym: Dde_0818
Alternate gene names: NA
Gene position: 839309-839824 (Clockwise)
Preceding gene: 78355863
Following gene: 78355866
Centisome position: 22.5
GC content: 63.76
Gene sequence:
>516_bases ATGCACAGGGTATGCCTGGATCTGCCTGAAGACCTGCTGGGGGCGGTGCAGCGGCTGGCCGGCAAAGACGGCGTGAGCAC TCCCGTATGGATGGTGCGCACGCTGCGTGAAAGAATTGCGGCCGAAGATGAGCGCATGAGCGCCGACAGACGCCGCCACC CGCGCATCCCCGTAGGGCTGAAAGGCAGCATACGCATGAATGGCAGCGGGGTCACATCAGCAGCCGGCGTGCACGATGTT TCTCTGGGCGGTGTATGGCTGTCCGTGGGGCAACCGCACGGACAGGAGCCTGATGTGACGGCCCTTTTGCAGCGGGGGGC GGTGTTCGAGCTTGTGTTCAGCCTGCCCGGCGGGGGCAGGCCTGTGCTGCTGCATTGTCAGGTGGTGCGCCGCAGCGCAG GAGAAAAAGCGCATGTGGGTGCGCGGCTGCTTACGGCGGAATGGAACAGCCTGAACGGACTGCACGCCTTTGTCGAACGC TCTGTGGCGGCTGCAGGTGAAGTGAATTCTGTGTAA
Upstream 100 bases:
>100_bases GCGGAGTGATTTCTTACTGGTCATGGTTACTCAGCTACTGGCATGAAATTGGCAAAAGACGCTATTAGAAAATAAGCGGA CTGTAACAGCGGAGGCGGTT
Downstream 100 bases:
>100_bases GTTTTTTCGACAGGGCCTGCGTTGTCACGGCAAGGAGCGTCACTGTGTATGCCAATCTTGTGTTTAAAGGAGGCGGCGTA AAGGGCGTTGCCTACGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MHRVCLDLPEDLLGAVQRLAGKDGVSTPVWMVRTLRERIAAEDERMSADRRRHPRIPVGLKGSIRMNGSGVTSAAGVHDV SLGGVWLSVGQPHGQEPDVTALLQRGAVFELVFSLPGGGRPVLLHCQVVRRSAGEKAHVGARLLTAEWNSLNGLHAFVER SVAAAGEVNSV
Sequences:
>Translated_171_residues MHRVCLDLPEDLLGAVQRLAGKDGVSTPVWMVRTLRERIAAEDERMSADRRRHPRIPVGLKGSIRMNGSGVTSAAGVHDV SLGGVWLSVGQPHGQEPDVTALLQRGAVFELVFSLPGGGRPVLLHCQVVRRSAGEKAHVGARLLTAEWNSLNGLHAFVER SVAAAGEVNSV >Mature_171_residues MHRVCLDLPEDLLGAVQRLAGKDGVSTPVWMVRTLRERIAAEDERMSADRRRHPRIPVGLKGSIRMNGSGVTSAAGVHDV SLGGVWLSVGQPHGQEPDVTALLQRGAVFELVFSLPGGGRPVLLHCQVVRRSAGEKAHVGARLLTAEWNSLNGLHAFVER SVAAAGEVNSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18290; Mature: 18290
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRVCLDLPEDLLGAVQRLAGKDGVSTPVWMVRTLRERIAAEDERMSADRRRHPRIPVGL CCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCC KGSIRMNGSGVTSAAGVHDVSLGGVWLSVGQPHGQEPDVTALLQRGAVFELVFSLPGGGR CCEEEECCCCCCCCCCCEEEEECCEEEECCCCCCCCCCHHHHHHCCCCEEHEEECCCCCC PVLLHCQVVRRSAGEKAHVGARLLTAEWNSLNGLHAFVERSVAAAGEVNSV EEEEEHHHHHHCCCCCHHCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MHRVCLDLPEDLLGAVQRLAGKDGVSTPVWMVRTLRERIAAEDERMSADRRRHPRIPVGL CCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCC KGSIRMNGSGVTSAAGVHDVSLGGVWLSVGQPHGQEPDVTALLQRGAVFELVFSLPGGGR CCEEEECCCCCCCCCCCEEEEECCEEEECCCCCCCCCCHHHHHHCCCCEEHEEECCCCCC PVLLHCQVVRRSAGEKAHVGARLLTAEWNSLNGLHAFVERSVAAAGEVNSV EEEEEHHHHHHCCCCCHHCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA