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The map label for this gene is cph2 [H]

Identifier: 78355863

GI number: 78355863

Start: 836668

End: 837528

Strand: Direct

Name: cph2 [H]

Synonym: Dde_0816

Alternate gene names: 78355863

Gene position: 836668-837528 (Clockwise)

Preceding gene: 78355862

Following gene: 78355865

Centisome position: 22.43

GC content: 65.27

Gene sequence:

>861_bases
ATGGGATACTTGTCCGCTGGAACCACAGGACGGCCCCGCAGCGGGCGGCGGGTGTGCTGCCGGTTTGCGCCGGTGCCGGT
CATGACGGCGGTCTGGCTGCTTTCAGAAGCCGGACAGGCGGCGGCCTTTGCGGGCGGTCTGACGGCGGTCCTGCCGCTGG
GGCTGGCGTTTACGGCTTCGGGGGCGGCATACGCCGGATGGCTTGCATACCGCTACGCCGCGGAACGCAGAGAACTGGCC
CGCAGGCTGGACGCCGCCCTGCATCACGAAGCCGGGCTGGCTGAACGGTTGCGCTGTGCGGAAGAAGAAGCCTGCAGGCA
GCGCGGCATCATGGAAGCAGCCGCTGCTGTGGAGCATGAAACAGGGCTGCCCAACAAAAGACTGTATGCAGTGCTGTTGC
AGAAGGCATGGGCTTACGGCCGGAGAAACAATGTGCCTGTGTCGCTGGTGGCGGTTTGTATGGATTATTACCCGGAACTG
CTTGAAACCAAGGGCAGTGCCCGTGCCGCGGAATGCCTACATAAACTGGCCCGCGTGCTGGGCGGGGCGTGCCGTCGCCC
CATGGATGTCTGCGCGCATCTGGGCGGGCCCGAATTTGCCCTTATTCTGCCGGATACAGCGGCGGACGGTGCGGCTGTGG
TTGTCTGCCGCATGCGGTACGAGCTGGAAAAAGCGGGTATTCTCAACCCGCGTTCAGGCACGGGGATGTATGTGACGGTT
TCGTCCGGAACAGCCACCGCGCTGCCCATGACGGAACATTCTAGCGAAGGGCTGGAGCAGGAAGCCGTTGCCCGCCTGCA
TGCCGCACGGCAGCTGGGCGGCAACGGGTCGGTGCCCGGACTGCAGTGCCCGGCCCGCTGA

Upstream 100 bases:

>100_bases
CGCACGGCATCATGATTGCATAGATAAATGGTGATACAGACGGTGCAGGTGCCGGTCAGCCATGACCGCCGCAGGGGGAT
AGCAGGTAGGAGAAACAGGT

Downstream 100 bases:

>100_bases
ATGCGGACGGGCAACGGCGGGTCACTGTCCGTCGGATGTCAGGCGGCAGCCGGTAAGCCTGCGCGCGGCTTTGTCTTTAT
ACATGTTCTTGTCTGCCGTG

Product: diguanylate cyclase

Products: NA

Alternate protein names: Bacteriophytochrome cph2 [H]

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MGYLSAGTTGRPRSGRRVCCRFAPVPVMTAVWLLSEAGQAAAFAGGLTAVLPLGLAFTASGAAYAGWLAYRYAAERRELA
RRLDAALHHEAGLAERLRCAEEEACRQRGIMEAAAAVEHETGLPNKRLYAVLLQKAWAYGRRNNVPVSLVAVCMDYYPEL
LETKGSARAAECLHKLARVLGGACRRPMDVCAHLGGPEFALILPDTAADGAAVVVCRMRYELEKAGILNPRSGTGMYVTV
SSGTATALPMTEHSSEGLEQEAVARLHAARQLGGNGSVPGLQCPAR

Sequences:

>Translated_286_residues
MGYLSAGTTGRPRSGRRVCCRFAPVPVMTAVWLLSEAGQAAAFAGGLTAVLPLGLAFTASGAAYAGWLAYRYAAERRELA
RRLDAALHHEAGLAERLRCAEEEACRQRGIMEAAAAVEHETGLPNKRLYAVLLQKAWAYGRRNNVPVSLVAVCMDYYPEL
LETKGSARAAECLHKLARVLGGACRRPMDVCAHLGGPEFALILPDTAADGAAVVVCRMRYELEKAGILNPRSGTGMYVTV
SSGTATALPMTEHSSEGLEQEAVARLHAARQLGGNGSVPGLQCPAR
>Mature_285_residues
GYLSAGTTGRPRSGRRVCCRFAPVPVMTAVWLLSEAGQAAAFAGGLTAVLPLGLAFTASGAAYAGWLAYRYAAERRELAR
RLDAALHHEAGLAERLRCAEEEACRQRGIMEAAAAVEHETGLPNKRLYAVLLQKAWAYGRRNNVPVSLVAVCMDYYPELL
ETKGSARAAECLHKLARVLGGACRRPMDVCAHLGGPEFALILPDTAADGAAVVVCRMRYELEKAGILNPRSGTGMYVTVS
SGTATALPMTEHSSEGLEQEAVARLHAARQLGGNGSVPGLQCPAR

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 GGDEF domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR003018
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515 [H]

Pfam domain/function: PF00563 EAL; PF01590 GAF; PF00990 GGDEF; PF00360 Phytochrome [H]

EC number: NA

Molecular weight: Translated: 30377; Mature: 30246

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYLSAGTTGRPRSGRRVCCRFAPVPVMTAVWLLSEAGQAAAFAGGLTAVLPLGLAFTAS
CCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHCC
GAAYAGWLAYRYAAERRELARRLDAALHHEAGLAERLRCAEEEACRQRGIMEAAAAVEHE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGLPNKRLYAVLLQKAWAYGRRNNVPVSLVAVCMDYYPELLETKGSARAAECLHKLARVL
CCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
GGACRRPMDVCAHLGGPEFALILPDTAADGAAVVVCRMRYELEKAGILNPRSGTGMYVTV
HHHCCCHHHHHHHCCCCCEEEEECCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCEEEEE
SSGTATALPMTEHSSEGLEQEAVARLHAARQLGGNGSVPGLQCPAR
ECCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GYLSAGTTGRPRSGRRVCCRFAPVPVMTAVWLLSEAGQAAAFAGGLTAVLPLGLAFTAS
CCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHCC
GAAYAGWLAYRYAAERRELARRLDAALHHEAGLAERLRCAEEEACRQRGIMEAAAAVEHE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGLPNKRLYAVLLQKAWAYGRRNNVPVSLVAVCMDYYPELLETKGSARAAECLHKLARVL
CCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
GGACRRPMDVCAHLGGPEFALILPDTAADGAAVVVCRMRYELEKAGILNPRSGTGMYVTV
HHHCCCHHHHHHHCCCCCEEEEECCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCEEEEE
SSGTATALPMTEHSSEGLEQEAVARLHAARQLGGNGSVPGLQCPAR
ECCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231; 10978170; 11063585 [H]