Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is yqhO [H]

Identifier: 78355866

GI number: 78355866

Start: 839869

End: 840888

Strand: Direct

Name: yqhO [H]

Synonym: Dde_0819

Alternate gene names: 78355866

Gene position: 839869-840888 (Clockwise)

Preceding gene: 78355865

Following gene: 78355867

Centisome position: 22.52

GC content: 58.24

Gene sequence:

>1020_bases
GTGTATGCCAATCTTGTGTTTAAAGGAGGCGGCGTAAAGGGCGTTGCCTACGCCGGAGCATTGAAAGTGCTTGAGCGGCG
GGGTCTGCTGCAGGGTGTAAGAAGGGTGGCGGGAGCATCTTCCGGTGCCATGGCGGCAGCTTTTCTGGCTTTGGGGGCCA
GTCCGGCCGATATGGCAGATATCGTGCTGCGTACCCCCTTCAGGCGGTTTATGGATTCTTCCGGCTGGGTGGGCGGCGAT
ATCCGCAGGCTGCTTACGGAATACGGCTGGTTTAAAGGAGATATGCTCAGCCGGTGGGTGCGGTCCAATGTGCAGGCGCT
TACCGGCAGCAGCCAGCTTACCTTTTCCGAACTGCGGGCGCTGGCTGCCGGTGAGCCTGCCCGTTTTCGCGAGCTTACAG
TGGTGGGGGCCAATCTTACGCTGCAGGCGTCCGAACTGTTTGATGCCGATGCAACCCCTGACATGCCGGTGTGGGAGGCT
GTACGCATATCCATGGGCATTCCGCTGTTTTTTCGCGCCATGCGTGCCAGAAGCGGAGATTTGCTGGTGGACGGCAGCGT
TACATGGAATTATCCGGTCACGCTTTTTGATCAGTGGCGCTATGTGAACGGCGGTCAGCCGCGGCCCCCCGTAGCGGCGG
ACGGTCTGCCCGCGGCGGAAGGAGGCGGCGTGCCCGGCGAGGTGTTCAATACGCGGACTCTCGGATTTATGGTGGAAACA
CGTGATGCAGTACAGGCGCGCAAAGAGATGCGCAGCGCAGCAGGCATTGACGGTTTCGGGGCGTATCTGCGTTCCATAAT
CGGATTCATGACCGATGTTTCGTGCAGTTCGTTTCTGACAGAGGCTGACTGGAACAGAACCGTTTTTATTGAGGCGCTTG
GAGTGCGTACCACTGATTTTGCCATCAGCAGAGACATGATTGCCCGTCTGGTAGACAGCGGCGAGCAGGGAGCGGAATTA
TATTTTTCTAAAAAACAGTCTGCCGGAACAGCAGCGCCATGCAGCGGAGGCTGTGATTAG

Upstream 100 bases:

>100_bases
TGCACGCCTTTGTCGAACGCTCTGTGGCGGCTGCAGGTGAAGTGAATTCTGTGTAAGTTTTTTCGACAGGGCCTGCGTTG
TCACGGCAAGGAGCGTCACT

Downstream 100 bases:

>100_bases
AAAAAGAGTTTCTTCTGTGATGTGAAAGGATGAGAAACACTGCATGGCACCGGAAGGCCTGTGCATCAGCATGACTGTTG
CCTGTCTGCGAAGTGGTCTG

Product: alpha-beta hydrolase superfamily esterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MYANLVFKGGGVKGVAYAGALKVLERRGLLQGVRRVAGASSGAMAAAFLALGASPADMADIVLRTPFRRFMDSSGWVGGD
IRRLLTEYGWFKGDMLSRWVRSNVQALTGSSQLTFSELRALAAGEPARFRELTVVGANLTLQASELFDADATPDMPVWEA
VRISMGIPLFFRAMRARSGDLLVDGSVTWNYPVTLFDQWRYVNGGQPRPPVAADGLPAAEGGGVPGEVFNTRTLGFMVET
RDAVQARKEMRSAAGIDGFGAYLRSIIGFMTDVSCSSFLTEADWNRTVFIEALGVRTTDFAISRDMIARLVDSGEQGAEL
YFSKKQSAGTAAPCSGGCD

Sequences:

>Translated_339_residues
MYANLVFKGGGVKGVAYAGALKVLERRGLLQGVRRVAGASSGAMAAAFLALGASPADMADIVLRTPFRRFMDSSGWVGGD
IRRLLTEYGWFKGDMLSRWVRSNVQALTGSSQLTFSELRALAAGEPARFRELTVVGANLTLQASELFDADATPDMPVWEA
VRISMGIPLFFRAMRARSGDLLVDGSVTWNYPVTLFDQWRYVNGGQPRPPVAADGLPAAEGGGVPGEVFNTRTLGFMVET
RDAVQARKEMRSAAGIDGFGAYLRSIIGFMTDVSCSSFLTEADWNRTVFIEALGVRTTDFAISRDMIARLVDSGEQGAEL
YFSKKQSAGTAAPCSGGCD
>Mature_339_residues
MYANLVFKGGGVKGVAYAGALKVLERRGLLQGVRRVAGASSGAMAAAFLALGASPADMADIVLRTPFRRFMDSSGWVGGD
IRRLLTEYGWFKGDMLSRWVRSNVQALTGSSQLTFSELRALAAGEPARFRELTVVGANLTLQASELFDADATPDMPVWEA
VRISMGIPLFFRAMRARSGDLLVDGSVTWNYPVTLFDQWRYVNGGQPRPPVAADGLPAAEGGGVPGEVFNTRTLGFMVET
RDAVQARKEMRSAAGIDGFGAYLRSIIGFMTDVSCSSFLTEADWNRTVFIEALGVRTTDFAISRDMIARLVDSGEQGAEL
YFSKKQSAGTAAPCSGGCD

Specific function: Probable lipid hydrolase [H]

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 36418; Mature: 36418

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYANLVFKGGGVKGVAYAGALKVLERRGLLQGVRRVAGASSGAMAAAFLALGASPADMAD
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHH
IVLRTPFRRFMDSSGWVGGDIRRLLTEYGWFKGDMLSRWVRSNVQALTGSSQLTFSELRA
HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LAAGEPARFRELTVVGANLTLQASELFDADATPDMPVWEAVRISMGIPLFFRAMRARSGD
HHCCCCCCEEEEEEECCCEEEEHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCC
LLVDGSVTWNYPVTLFDQWRYVNGGQPRPPVAADGLPAAEGGGVPGEVFNTRTLGFMVET
EEEECCEEECCCEEEEECEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEEEEEC
RDAVQARKEMRSAAGIDGFGAYLRSIIGFMTDVSCSSFLTEADWNRTVFIEALGVRTTDF
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECCCCHHH
AISRDMIARLVDSGEQGAELYFSKKQSAGTAAPCSGGCD
HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYANLVFKGGGVKGVAYAGALKVLERRGLLQGVRRVAGASSGAMAAAFLALGASPADMAD
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHH
IVLRTPFRRFMDSSGWVGGDIRRLLTEYGWFKGDMLSRWVRSNVQALTGSSQLTFSELRA
HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LAAGEPARFRELTVVGANLTLQASELFDADATPDMPVWEAVRISMGIPLFFRAMRARSGD
HHCCCCCCEEEEEEECCCEEEEHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCC
LLVDGSVTWNYPVTLFDQWRYVNGGQPRPPVAADGLPAAEGGGVPGEVFNTRTLGFMVET
EEEECCEEECCCEEEEECEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEEEEEC
RDAVQARKEMRSAAGIDGFGAYLRSIIGFMTDVSCSSFLTEADWNRTVFIEALGVRTTDF
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECCCCHHH
AISRDMIARLVDSGEQGAELYFSKKQSAGTAAPCSGGCD
HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]