Click here to switch to the map view.

The map label for this gene is yiiT [C]

Identifier: 78355636

GI number: 78355636

Start: 611789

End: 612211

Strand: Direct

Name: yiiT [C]

Synonym: Dde_0589

Alternate gene names: 78355636

Gene position: 611789-612211 (Clockwise)

Preceding gene: 78355634

Following gene: 78355637

Centisome position: 16.4

GC content: 55.32

Gene sequence:

>423_bases
ATGGCGTTTAAAAAAATACTGCTGGCTGTGGACGGTTCCAGCAATTCCCGTTTTGCCATGCGTCACGCCGTGGCGCTGGC
CAGATGCTCGGAAGGGCAGGTAGTGCTGATGCATTGTTTCGGCGAGGTGCCCAACCTTATCGGCGGTGCGGCCCGTACTG
AAATTGCAGCCGAAATGCATAAGAATGCTGAAGAAATGATACAGGTCTTCCGCGAAGATCTGGAACGCGAAGGCGTGAAG
TTTACCGTGCGCATCGAACACGGCAAGCCCAGCGACACCATTGTAGAAGTAGCCGATGACGAAAAGTGCGATGTAATAGT
CATGGGTTCGCGCGGGCTGAATGATTTTGAAGGTATGCTGCTGGGCAGTGTGGCCCACCGGGTACTTTCCATGTCCGGCG
TGCCGGTGCTCGTGTCGCGCTAG

Upstream 100 bases:

>100_bases
CATCATCCTTTTAGTAACAACGTTCCGGCCGCCGTGCCGGAGCGTACTGACATCACATTCAATGACACTTGCAGTGAATG
ATCATTGCGCGGAGGTTGTT

Downstream 100 bases:

>100_bases
CGGTTGCGCGTAAAATTATACAGGCGGTTCCGCTGGGGCCGCCTTTCTTTTTGTCTGCGGCATTGCCCTTCTGTGTGGCT
GGCGGTAAGAAGAATACCAG

Product: universal stress protein

Products: NA

Alternate protein names: USP MJ0531 [H]

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MAFKKILLAVDGSSNSRFAMRHAVALARCSEGQVVLMHCFGEVPNLIGGAARTEIAAEMHKNAEEMIQVFREDLEREGVK
FTVRIEHGKPSDTIVEVADDEKCDVIVMGSRGLNDFEGMLLGSVAHRVLSMSGVPVLVSR

Sequences:

>Translated_140_residues
MAFKKILLAVDGSSNSRFAMRHAVALARCSEGQVVLMHCFGEVPNLIGGAARTEIAAEMHKNAEEMIQVFREDLEREGVK
FTVRIEHGKPSDTIVEVADDEKCDVIVMGSRGLNDFEGMLLGSVAHRVLSMSGVPVLVSR
>Mature_139_residues
AFKKILLAVDGSSNSRFAMRHAVALARCSEGQVVLMHCFGEVPNLIGGAARTEIAAEMHKNAEEMIQVFREDLEREGVKF
TVRIEHGKPSDTIVEVADDEKCDVIVMGSRGLNDFEGMLLGSVAHRVLSMSGVPVLVSR

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 15270; Mature: 15139

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFKKILLAVDGSSNSRFAMRHAVALARCSEGQVVLMHCFGEVPNLIGGAARTEIAAEMH
CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCHHHHHHHHHHH
KNAEEMIQVFREDLEREGVKFTVRIEHGKPSDTIVEVADDEKCDVIVMGSRGLNDFEGML
CCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEECCCCCCCEEEECCCCCCHHHHHH
LGSVAHRVLSMSGVPVLVSR
HHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure 
AFKKILLAVDGSSNSRFAMRHAVALARCSEGQVVLMHCFGEVPNLIGGAARTEIAAEMH
CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCHHHHHHHHHHH
KNAEEMIQVFREDLEREGVKFTVRIEHGKPSDTIVEVADDEKCDVIVMGSRGLNDFEGML
CCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEECCCCCCCEEEECCCCCCHHHHHH
LGSVAHRVLSMSGVPVLVSR
HHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]