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The map label for this gene is 78224722

Identifier: 78224722

GI number: 78224722

Start: 3972394

End: 3973149

Strand: Direct

Name: 78224722

Synonym: Gmet_3539

Alternate gene names: NA

Gene position: 3972394-3973149 (Clockwise)

Preceding gene: 78224721

Following gene: 78224723

Centisome position: 99.37

GC content: 66.14

Gene sequence:

>756_bases
ATGAGCCGTACCCGCCAACCGAGAGATACCGGGCTGGGGTGGGGGGTTGCCGCTTCCTGCGTCGTCCACGCCTCCGTCGC
CGCCTTTGTCCTCCTCCACCACTTCTCTTCCCCCGCCCCCCTAGAGGCGCCCGTCTACTACGTGGATGTCGTGAACCTGC
CGGTGGCCGCTCCCCAAGCCGGGAGTCCCGTAACCGGAGGGAGCCCGCCCCCAGCGGCGCCGTCTCCCCCACCGAAGCCC
GCGGAGATGGCCCTTCCCCAGAAACGCACCCCGACAAAGGCGGCCACGCCGAAGAAGAGTTCCTCAAAGGAGAGTGATGC
CGGCAAGGCCTTCGAGGAGCGGATGGACAAACTCCAGCGGGCCATCGACGAACGGCGCCAAGAAGCGGCCCTCGACTCCC
TGCGGCGCAAGACCGCAGGAAGCGGCCGCCAGCCGGAGCGGGTGGGAACCCCCGGCGGCACCGGGAAAGAGGCCGGAAGC
GACTACGCCAGCTATATCCAGTCCCGGCTCACGGACGCCTTCCAGTCCACCATCGCCCACCAGAGCAAGGCACCGGAAGT
GGTGGTAAAACTCACCATCGACGCCGGCGGGCACATCGCGCGGAAGCGGATCGAGCGTTCGAGCGGCGACAAAATTTTCG
AGGAATCGGTCTACAAGGCCATCGCCCGGGCCGAAAAGACCTTTGTCCCGCCCCCCGGCGGCGGCGAATTCGACTACGGT
TTCATCTTCAGACCACAGGGAGTGGGAAAAAAATGA

Upstream 100 bases:

>100_bases
ACCGGGATGTCCCCTACGGAGATGTGGTGCGAACCATGGCTGAAATCAAGGGGGCCGGCATCGAGCGCCTCGGCATGGTG
ACGGAGCCAGCCCCGACAAA

Downstream 100 bases:

>100_bases
CACGACGTCTCTTCATTCTCATCACCATCATGCTCTGCCTGATCCCCGCACTCCTCCATTCCCAGGAAGGGTATCGGGAA
GTGACGGCTGCGGGAACCCA

Product: TonB-like

Products: NA

Alternate protein names: NB-Like; NB-Dependent Receptor; NB-Like Periplasmic Protein

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MSRTRQPRDTGLGWGVAASCVVHASVAAFVLLHHFSSPAPLEAPVYYVDVVNLPVAAPQAGSPVTGGSPPPAAPSPPPKP
AEMALPQKRTPTKAATPKKSSSKESDAGKAFEERMDKLQRAIDERRQEAALDSLRRKTAGSGRQPERVGTPGGTGKEAGS
DYASYIQSRLTDAFQSTIAHQSKAPEVVVKLTIDAGGHIARKRIERSSGDKIFEESVYKAIARAEKTFVPPPGGGEFDYG
FIFRPQGVGKK

Sequences:

>Translated_251_residues
MSRTRQPRDTGLGWGVAASCVVHASVAAFVLLHHFSSPAPLEAPVYYVDVVNLPVAAPQAGSPVTGGSPPPAAPSPPPKP
AEMALPQKRTPTKAATPKKSSSKESDAGKAFEERMDKLQRAIDERRQEAALDSLRRKTAGSGRQPERVGTPGGTGKEAGS
DYASYIQSRLTDAFQSTIAHQSKAPEVVVKLTIDAGGHIARKRIERSSGDKIFEESVYKAIARAEKTFVPPPGGGEFDYG
FIFRPQGVGKK
>Mature_250_residues
SRTRQPRDTGLGWGVAASCVVHASVAAFVLLHHFSSPAPLEAPVYYVDVVNLPVAAPQAGSPVTGGSPPPAAPSPPPKPA
EMALPQKRTPTKAATPKKSSSKESDAGKAFEERMDKLQRAIDERRQEAALDSLRRKTAGSGRQPERVGTPGGTGKEAGSD
YASYIQSRLTDAFQSTIAHQSKAPEVVVKLTIDAGGHIARKRIERSSGDKIFEESVYKAIARAEKTFVPPPGGGEFDYGF
IFRPQGVGKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26699; Mature: 26568

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTRQPRDTGLGWGVAASCVVHASVAAFVLLHHFSSPAPLEAPVYYVDVVNLPVAAPQA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCC
GSPVTGGSPPPAAPSPPPKPAEMALPQKRTPTKAATPKKSSSKESDAGKAFEERMDKLQR
CCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
AIDERRQEAALDSLRRKTAGSGRQPERVGTPGGTGKEAGSDYASYIQSRLTDAFQSTIAH
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QSKAPEVVVKLTIDAGGHIARKRIERSSGDKIFEESVYKAIARAEKTFVPPPGGGEFDYG
HCCCCEEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
FIFRPQGVGKK
EEECCCCCCCC
>Mature Secondary Structure 
SRTRQPRDTGLGWGVAASCVVHASVAAFVLLHHFSSPAPLEAPVYYVDVVNLPVAAPQA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCC
GSPVTGGSPPPAAPSPPPKPAEMALPQKRTPTKAATPKKSSSKESDAGKAFEERMDKLQR
CCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
AIDERRQEAALDSLRRKTAGSGRQPERVGTPGGTGKEAGSDYASYIQSRLTDAFQSTIAH
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QSKAPEVVVKLTIDAGGHIARKRIERSSGDKIFEESVYKAIARAEKTFVPPPGGGEFDYG
HCCCCEEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
FIFRPQGVGKK
EEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA