Click here to switch to the map view.

The map label for this gene is 78224321

Identifier: 78224321

GI number: 78224321

Start: 3525824

End: 3527164

Strand: Reverse

Name: 78224321

Synonym: Gmet_3129

Alternate gene names: NA

Gene position: 3527164-3525824 (Counterclockwise)

Preceding gene: 78224323

Following gene: 78224320

Centisome position: 88.24

GC content: 65.7

Gene sequence:

>1341_bases
GTGAAGTATTTTTCCGCCGCTTTATTGTTACTGGTTCTTACCCCGTCGTTCCTGCTGGCTGCCGAACCCTCGGTGGCCCT
TAACGAGGCCCTGATCCTGGCTCTGAAACAGAACCACCTGGTGAGCGGCGCCGCTTACGAGAAAGAGGCGGCGGTGGAGG
GGGCGGCTGCGAGCCGCAGCCGGTACCTGCCCCGGATCGTGGCGGAAGAGGCGTTCAGCGCTTCGGACCTTCCCACCCGC
GTTTTCATGATGAAACTGGACCAGGGGCGTTTTGCATCGAGCGACTTCGAACTCGGCAATCTGAACACTCCCTCTTCCTA
CCATGACTTCCGCACGGCGCTTACCCTGGAACAGCCCCTCTTCGACCTGGGGATCGGCTACGGTCGGGAGATGGCAGAGC
GGGAGGCGGAGCGGATGGGGTACCGGTTCGAGGGGCGCCGTGAAGATGTGGGGTTCGCAGTTTATGGAGCCTATCTGGGA
GTGCAGCGGGCAAAGGCTGTCCTGGCTGCCGCCGAGAAGGACGTGGAAGAGGCCCGGGAGCACCTGCGGGTGGCCACGGT
CCGCGGCCATGAGGGAACCGGGCTCAAGTCCGACGAATTGCGGGCAAGAACCTTCCTTTCCGAGGCGGAGGAGCGGACCA
TCACCGCCCTCAACGACCTGAAGCTGGCCAAAATGCGCCTGGCCCTCGCCGTGGGAGGCGGACCCGGGGAATCCCTCGAT
ATCCGCGGGGATGTGACGGGTGAGGCGTTCCGCTTGAACGAGGATGAGATCGTGCGCCAGGCCGTTGCCAACCGCCGGGA
CCTGAAGGGGGCCGAAAAGGGGGTGGAGCGGGCCGCGGCCGCCGTGGGGCTCGCCCGTAGCGCCTGGTTCCCCACGCTTT
ACGCCGCTGCGTCCGTGCAGATGAACGACAGGGATGTTCCCTTCGGTCGCGATAACGACGGGTGGAGCGCCGGGGTGAAC
CTGCGCTGGGAGGTCTTTGACGGCATGGGAAGGATGCACGGGGCGGCCAAGGCACGGGCCGAGCGGGACGCTGCCGCCCA
GTACCTGGAGCAGTTCCGCAAGGAAGTGGACCTCCAGGTGCGGGAGAGCATTCTGCGCCGGGCCGAGGCGGGAAAACGGC
TGGAGGTGGCGCGCCATGCGCTTCTGGCGGCCGAGGAGGGATCCCGGCTCGTGAACAAGCGCTTCGCCAACGGCCTCGCC
ACCATGGTGGAGCTTCTGGATGCCCAGTCGGCCCTCAGCCGGGCGAGGACCGGACTCGTGGAGCGAGAGGCCGACCACCT
GCTGGCAACGGCCCGGATATATTACACCGCCGGCATATTCCTGAAGGAGATGGCACCATGA

Upstream 100 bases:

>100_bases
ACTTTTACGGTTGACACAATCGAGTGCAATACATATATATAAATTCATATATTTTACGTTCTGCTAGATTTGGCCGACAT
CAAGGAGAAAGGGACGTTCC

Downstream 100 bases:

>100_bases
GGATGCGGACAATCACCGTCCTTCTCCTTTTCGCCGCTGCCGTACTGACGTTTTACGGCTGCGGCGGGGGGAAGGAAGGA
GCGGAGAAGAGAGAAAAACC

Product: Outer membrane efflux protein

Products: NA

Alternate protein names: Outer Membrane Efflux Family Protein; LipD Protein; Outer Membrane Protein; RND Family Efflux Pump Outer Membrane Protein; Type I Secretion Outer Membrane Protein; Outer Membrane Protein CyaE

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MKYFSAALLLLVLTPSFLLAAEPSVALNEALILALKQNHLVSGAAYEKEAAVEGAAASRSRYLPRIVAEEAFSASDLPTR
VFMMKLDQGRFASSDFELGNLNTPSSYHDFRTALTLEQPLFDLGIGYGREMAEREAERMGYRFEGRREDVGFAVYGAYLG
VQRAKAVLAAAEKDVEEAREHLRVATVRGHEGTGLKSDELRARTFLSEAEERTITALNDLKLAKMRLALAVGGGPGESLD
IRGDVTGEAFRLNEDEIVRQAVANRRDLKGAEKGVERAAAAVGLARSAWFPTLYAAASVQMNDRDVPFGRDNDGWSAGVN
LRWEVFDGMGRMHGAAKARAERDAAAQYLEQFRKEVDLQVRESILRRAEAGKRLEVARHALLAAEEGSRLVNKRFANGLA
TMVELLDAQSALSRARTGLVEREADHLLATARIYYTAGIFLKEMAP

Sequences:

>Translated_446_residues
MKYFSAALLLLVLTPSFLLAAEPSVALNEALILALKQNHLVSGAAYEKEAAVEGAAASRSRYLPRIVAEEAFSASDLPTR
VFMMKLDQGRFASSDFELGNLNTPSSYHDFRTALTLEQPLFDLGIGYGREMAEREAERMGYRFEGRREDVGFAVYGAYLG
VQRAKAVLAAAEKDVEEAREHLRVATVRGHEGTGLKSDELRARTFLSEAEERTITALNDLKLAKMRLALAVGGGPGESLD
IRGDVTGEAFRLNEDEIVRQAVANRRDLKGAEKGVERAAAAVGLARSAWFPTLYAAASVQMNDRDVPFGRDNDGWSAGVN
LRWEVFDGMGRMHGAAKARAERDAAAQYLEQFRKEVDLQVRESILRRAEAGKRLEVARHALLAAEEGSRLVNKRFANGLA
TMVELLDAQSALSRARTGLVEREADHLLATARIYYTAGIFLKEMAP
>Mature_446_residues
MKYFSAALLLLVLTPSFLLAAEPSVALNEALILALKQNHLVSGAAYEKEAAVEGAAASRSRYLPRIVAEEAFSASDLPTR
VFMMKLDQGRFASSDFELGNLNTPSSYHDFRTALTLEQPLFDLGIGYGREMAEREAERMGYRFEGRREDVGFAVYGAYLG
VQRAKAVLAAAEKDVEEAREHLRVATVRGHEGTGLKSDELRARTFLSEAEERTITALNDLKLAKMRLALAVGGGPGESLD
IRGDVTGEAFRLNEDEIVRQAVANRRDLKGAEKGVERAAAAVGLARSAWFPTLYAAASVQMNDRDVPFGRDNDGWSAGVN
LRWEVFDGMGRMHGAAKARAERDAAAQYLEQFRKEVDLQVRESILRRAEAGKRLEVARHALLAAEEGSRLVNKRFANGLA
TMVELLDAQSALSRARTGLVEREADHLLATARIYYTAGIFLKEMAP

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48982; Mature: 48982

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYFSAALLLLVLTPSFLLAAEPSVALNEALILALKQNHLVSGAAYEKEAAVEGAAASRS
CCHHHHHHHHHHHCCHHHEECCCCHHHHHHHHEEECCCCEECCCCHHHHHHHCCHHHHHH
RYLPRIVAEEAFSASDLPTRVFMMKLDQGRFASSDFELGNLNTPSSYHDFRTALTLEQPL
HCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCH
FDLGIGYGREMAEREAERMGYRFEGRREDVGFAVYGAYLGVQRAKAVLAAAEKDVEEARE
HHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLRVATVRGHEGTGLKSDELRARTFLSEAEERTITALNDLKLAKMRLALAVGGGPGESLD
HHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCEE
IRGDVTGEAFRLNEDEIVRQAVANRRDLKGAEKGVERAAAAVGLARSAWFPTLYAAASVQ
ECCCCCCCEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
MNDRDVPFGRDNDGWSAGVNLRWEVFDGMGRMHGAAKARAERDAAAQYLEQFRKEVDLQV
ECCCCCCCCCCCCCCCCCCEEEEEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
RESILRRAEAGKRLEVARHALLAAEEGSRLVNKRFANGLATMVELLDAQSALSRARTGLV
HHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EREADHLLATARIYYTAGIFLKEMAP
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKYFSAALLLLVLTPSFLLAAEPSVALNEALILALKQNHLVSGAAYEKEAAVEGAAASRS
CCHHHHHHHHHHHCCHHHEECCCCHHHHHHHHEEECCCCEECCCCHHHHHHHCCHHHHHH
RYLPRIVAEEAFSASDLPTRVFMMKLDQGRFASSDFELGNLNTPSSYHDFRTALTLEQPL
HCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCH
FDLGIGYGREMAEREAERMGYRFEGRREDVGFAVYGAYLGVQRAKAVLAAAEKDVEEARE
HHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLRVATVRGHEGTGLKSDELRARTFLSEAEERTITALNDLKLAKMRLALAVGGGPGESLD
HHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCEE
IRGDVTGEAFRLNEDEIVRQAVANRRDLKGAEKGVERAAAAVGLARSAWFPTLYAAASVQ
ECCCCCCCEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
MNDRDVPFGRDNDGWSAGVNLRWEVFDGMGRMHGAAKARAERDAAAQYLEQFRKEVDLQV
ECCCCCCCCCCCCCCCCCCEEEEEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
RESILRRAEAGKRLEVARHALLAAEEGSRLVNKRFANGLATMVELLDAQSALSRARTGLV
HHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EREADHLLATARIYYTAGIFLKEMAP
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA