Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is pit [H]
Identifier: 78224323
GI number: 78224323
Start: 3527965
End: 3528966
Strand: Reverse
Name: pit [H]
Synonym: Gmet_3131
Alternate gene names: 78224323
Gene position: 3528966-3527965 (Counterclockwise)
Preceding gene: 78224324
Following gene: 78224321
Centisome position: 88.28
GC content: 60.98
Gene sequence:
>1002_bases ATGCTTGATGCCACGTTGATCATGCTCGTCCTGGTCATCGGAGCGGCGCTGGCGTTCGACTACATCAACGGCTTCCACGA TACGGCAAATGCCATCGCCACCTGCGTCTCGACCCGGGCACTCTCCGTCAGGGCCGCCATTATCATGGCGGCGGTGCTGA ACTTCGCCGGCGCCATGATCTCCACCAAGGTGGCCGCCACCATCGGCAAGGGGATCGTCGATGCGCCCAACGTTACCCAG ATGGTGGTCCTGGCGGGGATCCTCGGCGCCATTGTCTGGGATTTGATCACCTGGTACTACGGACTCCCCGCCTCCTCCTC CCACGCCATCATCGGTGGACTCATGGGTGCGGTGATCGCCCATGCCGGCACGACGGCCCTCCACTGGAAAGGCCTCGAAA AGATCGTCCTCTCCCTGGTCCTTTCCCCCATCGTGGGAACCTTCCTCGGTTTCGCCGTCATGGTCATCATGCTCTGGTGT TTTAAAAGCACATCACCCTATTCCATTAATAAACACTTCCGGCGACTTCAGGTTCTCTCGGCGGCCTTCATGGCCTTCTC CCACGGCACCGCCGACGCCCAGAAGTCCATGGGGGTCATCACCATGGCGCTGGTGAGCTACGGAGCCCTCTCCTCCTTCG TTGTTCCCACCTGGGTGAAGATTGCCTGCGCCGTGGCCATGGGGCTCGGCACCGCCGCCGGCGGGTGGCGGATCATCAAG ACCGTCGGCAAAGACTTCGTGAAGCTTCAGCCCGTTCACGGCTTCTGTGTCGAAACCGCCTCGGCCGGGGTCATTCTGGG GGCGTCATCCATCGGGATGCCGGTCAGTACTACTCACGTCATCACGTCCGCAATTCTCGGCGTTGGTCTCTCAAAGCGCC TCACAGCGGTCAACTGGAACGTGGCCGGGAGGATAGTCGTCGCCTGGGTCCTGACCATCCCGGCATCGGCGATCATGGCC TATGTCTGCTACCAGGTTCTCAATCCTATTCTTGGGAAGTGA
Upstream 100 bases:
>100_bases ATCCAGCTCATCAAGTGGAAAGAGATCTACGAGACCCTGGAGCGGGCAACCGACAAGTGCGAGGACGCGGCCAACATTCT GGAAAGCGTGGTGGTGAAAA
Downstream 100 bases:
>100_bases GCGGAGTTGCCGCTGAACAGTGGCGGGTGACAAATCGACAGGAAACAGAAAAAGCGGGGCATCGTCCCCGCTTTTTCTAT TCCAGCTCTTCGCCGACCTC
Product: phosphate transporter
Products: Proton [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MLDATLIMLVLVIGAALAFDYINGFHDTANAIATCVSTRALSVRAAIIMAAVLNFAGAMISTKVAATIGKGIVDAPNVTQ MVVLAGILGAIVWDLITWYYGLPASSSHAIIGGLMGAVIAHAGTTALHWKGLEKIVLSLVLSPIVGTFLGFAVMVIMLWC FKSTSPYSINKHFRRLQVLSAAFMAFSHGTADAQKSMGVITMALVSYGALSSFVVPTWVKIACAVAMGLGTAAGGWRIIK TVGKDFVKLQPVHGFCVETASAGVILGASSIGMPVSTTHVITSAILGVGLSKRLTAVNWNVAGRIVVAWVLTIPASAIMA YVCYQVLNPILGK
Sequences:
>Translated_333_residues MLDATLIMLVLVIGAALAFDYINGFHDTANAIATCVSTRALSVRAAIIMAAVLNFAGAMISTKVAATIGKGIVDAPNVTQ MVVLAGILGAIVWDLITWYYGLPASSSHAIIGGLMGAVIAHAGTTALHWKGLEKIVLSLVLSPIVGTFLGFAVMVIMLWC FKSTSPYSINKHFRRLQVLSAAFMAFSHGTADAQKSMGVITMALVSYGALSSFVVPTWVKIACAVAMGLGTAAGGWRIIK TVGKDFVKLQPVHGFCVETASAGVILGASSIGMPVSTTHVITSAILGVGLSKRLTAVNWNVAGRIVVAWVLTIPASAIMA YVCYQVLNPILGK >Mature_333_residues MLDATLIMLVLVIGAALAFDYINGFHDTANAIATCVSTRALSVRAAIIMAAVLNFAGAMISTKVAATIGKGIVDAPNVTQ MVVLAGILGAIVWDLITWYYGLPASSSHAIIGGLMGAVIAHAGTTALHWKGLEKIVLSLVLSPIVGTFLGFAVMVIMLWC FKSTSPYSINKHFRRLQVLSAAFMAFSHGTADAQKSMGVITMALVSYGALSSFVVPTWVKIACAVAMGLGTAAGGWRIIK TVGKDFVKLQPVHGFCVETASAGVILGASSIGMPVSTTHVITSAILGVGLSKRLTAVNWNVAGRIVVAWVLTIPASAIMA YVCYQVLNPILGK
Specific function: Low-affinity inorganic phosphate transport [H]
COG id: COG0306
COG function: function code P; Phosphate/sulphate permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family. Pit subfamily [H]
Homologues:
Organism=Homo sapiens, GI31543630, Length=164, Percent_Identity=36.5853658536585, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI5803173, Length=163, Percent_Identity=35.5828220858896, Blast_Score=97, Evalue=2e-20, Organism=Escherichia coli, GI1789907, Length=227, Percent_Identity=34.3612334801762, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI1789360, Length=227, Percent_Identity=34.3612334801762, Blast_Score=104, Evalue=8e-24, Organism=Caenorhabditis elegans, GI71981576, Length=156, Percent_Identity=30.7692307692308, Blast_Score=85, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17539280, Length=165, Percent_Identity=29.6969696969697, Blast_Score=85, Evalue=6e-17, Organism=Caenorhabditis elegans, GI25146401, Length=156, Percent_Identity=30.7692307692308, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17536725, Length=167, Percent_Identity=28.7425149700599, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI32566716, Length=153, Percent_Identity=29.4117647058824, Blast_Score=75, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6319773, Length=151, Percent_Identity=34.4370860927152, Blast_Score=80, Evalue=4e-16, Organism=Drosophila melanogaster, GI21356511, Length=176, Percent_Identity=26.7045454545455, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001204 [H]
Pfam domain/function: PF01384 PHO4 [H]
EC number: NA
Molecular weight: Translated: 34708; Mature: 34708
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDATLIMLVLVIGAALAFDYINGFHDTANAIATCVSTRALSVRAAIIMAAVLNFAGAMI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STKVAATIGKGIVDAPNVTQMVVLAGILGAIVWDLITWYYGLPASSSHAIIGGLMGAVIA HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH HAGTTALHWKGLEKIVLSLVLSPIVGTFLGFAVMVIMLWCFKSTSPYSINKHFRRLQVLS HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH AAFMAFSHGTADAQKSMGVITMALVSYGALSSFVVPTWVKIACAVAMGLGTAAGGWRIIK HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH TVGKDFVKLQPVHGFCVETASAGVILGASSIGMPVSTTHVITSAILGVGLSKRLTAVNWN HHHHHHHEECCCCHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHEEECCC VAGRIVVAWVLTIPASAIMAYVCYQVLNPILGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLDATLIMLVLVIGAALAFDYINGFHDTANAIATCVSTRALSVRAAIIMAAVLNFAGAMI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STKVAATIGKGIVDAPNVTQMVVLAGILGAIVWDLITWYYGLPASSSHAIIGGLMGAVIA HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH HAGTTALHWKGLEKIVLSLVLSPIVGTFLGFAVMVIMLWCFKSTSPYSINKHFRRLQVLS HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH AAFMAFSHGTADAQKSMGVITMALVSYGALSSFVVPTWVKIACAVAMGLGTAAGGWRIIK HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH TVGKDFVKLQPVHGFCVETASAGVILGASSIGMPVSTTHVITSAILGVGLSKRLTAVNWN HHHHHHHEECCCCHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHEEECCC VAGRIVVAWVLTIPASAIMAYVCYQVLNPILGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; phosphate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + phosphate [Periplasm] = Proton [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]