Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is flgB [C]
Identifier: 78224307
GI number: 78224307
Start: 3513137
End: 3513559
Strand: Reverse
Name: flgB [C]
Synonym: Gmet_3115
Alternate gene names: 78224307
Gene position: 3513559-3513137 (Counterclockwise)
Preceding gene: 78224308
Following gene: 78224306
Centisome position: 87.9
GC content: 54.85
Gene sequence:
>423_bases ATGCCGATTGACAAAATATTTGGAACCACGGTGGATCTTCTGGCCAAGAGCATCGATCTCCGCTCCCGGAGCCACACCAT GATTTCCGCCAACCTGGCCAACGTCGAGACCCCCAACTATACCCCCACGGCCCTTTCCTTCGAAAATGAGCTCAAGGGTG CCCTCAAGGGGAAAAAGGTGGGAACCCCGGCCATCACCCATCCGAAGCACATCCCGCTCAAGGGGCAGAGCAACTCCATC CAGCAGGTTCAGGGGACGGTGATTGATACCTCCTCCCTCTCCCCCGGCAAGGACTATAACGGGGTAGACCTGGAAACGGA GATGTCCCGCATGGCGGAAAACCAGATCATGTACAACGCCTCGATCCAGATCCTCTCCAAGCAGTTCAACGAAATCAAAT CCGCTATCAGGGAGAATAAATAA
Upstream 100 bases:
>100_bases GAAAGACATTGAAAATTCTGGATTCTGAATTCTGACTCCTGACTTCTTTCTCTGGTACGCCTTTTGCTGAACAGGTTGCG TAGGAACAAGGAGGACCCCA
Downstream 100 bases:
>100_bases TGGATTTCTTCAGCGCCATGCAGATCAGCTCTTCCGCTCTCTCTGCCGAGCGGACGCGGATGAACCTCATCTCCTCCAAC ATCGCCAACGCCAACTCCAC
Product: flagellar basal-body rod protein FlgB
Products: NA
Alternate protein names: Flagellar Basal Body Rod Protein FlgB; Flagellar Basal-Body Rod Protein; Flagellar Basal Body Protein; Flagellar Basal-Body Rod Protein Flgb
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MPIDKIFGTTVDLLAKSIDLRSRSHTMISANLANVETPNYTPTALSFENELKGALKGKKVGTPAITHPKHIPLKGQSNSI QQVQGTVIDTSSLSPGKDYNGVDLETEMSRMAENQIMYNASIQILSKQFNEIKSAIRENK
Sequences:
>Translated_140_residues MPIDKIFGTTVDLLAKSIDLRSRSHTMISANLANVETPNYTPTALSFENELKGALKGKKVGTPAITHPKHIPLKGQSNSI QQVQGTVIDTSSLSPGKDYNGVDLETEMSRMAENQIMYNASIQILSKQFNEIKSAIRENK >Mature_139_residues PIDKIFGTTVDLLAKSIDLRSRSHTMISANLANVETPNYTPTALSFENELKGALKGKKVGTPAITHPKHIPLKGQSNSIQ QVQGTVIDTSSLSPGKDYNGVDLETEMSRMAENQIMYNASIQILSKQFNEIKSAIRENK
Specific function: Unknown
COG id: COG1815
COG function: function code N; Flagellar basal body protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787313, Length=118, Percent_Identity=28.8135593220339, Blast_Score=60, Evalue=6e-11,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15359; Mature: 15228
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIDKIFGTTVDLLAKSIDLRSRSHTMISANLANVETPNYTPTALSFENELKGALKGKKV CCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEECHHHHHHHHHCCCCC GTPAITHPKHIPLKGQSNSIQQVQGTVIDTSSLSPGKDYNGVDLETEMSRMAENQIMYNA CCCCCCCCCCCCCCCCCCCHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHEEEHH SIQILSKQFNEIKSAIRENK HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PIDKIFGTTVDLLAKSIDLRSRSHTMISANLANVETPNYTPTALSFENELKGALKGKKV CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEECHHHHHHHHHCCCCC GTPAITHPKHIPLKGQSNSIQQVQGTVIDTSSLSPGKDYNGVDLETEMSRMAENQIMYNA CCCCCCCCCCCCCCCCCCCHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHEEEHH SIQILSKQFNEIKSAIRENK HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA