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The map label for this gene is 78224308

Identifier: 78224308

GI number: 78224308

Start: 3513711

End: 3515813

Strand: Reverse

Name: 78224308

Synonym: Gmet_3116

Alternate gene names: NA

Gene position: 3515813-3513711 (Counterclockwise)

Preceding gene: 78224309

Following gene: 78224307

Centisome position: 87.95

GC content: 65.0

Gene sequence:

>2103_bases
GTGAACAGATTACTGAAAACAGCCCTCGGCTGCGCCCTCCTGCTCCTGACCATCCTGGCGACAGCGGATCCTGGCCGGGC
CGACGACCGGAACCGTCTCCGCCGCATTGACGTCAGGCCCCGAAGCGGATTCACGCGGCTTATGCTCAAGCTCGATCGGG
AACCGGCTTATACGCTGACCCCTCTTGCGGGAAACCGGGTGCGGGTCACGCTGCGGGATACCGACGGCGCCCGATGGAAG
CGGCTCCGCTCCTACAGCGACCCCAACATTGCCGGCTGCGCCGTTGCCAGGCGTCGGGGGGATCTCCTCGTCACCGTGGG
TGTCAAAGGTGATCCCCGCGGAGTGAGGGCCATCGCCATGCCGGGAGTGGCGGCGCTCACCCTCGACGTGGGGAGCCGCC
TGGCCCCTTCCCGCACCTCTCCCTTCGCCCAGGGGCGTGATGGAATCAAGGTTGGGGTCGAGCAGCTTGTCTCGCGCTTC
GATCCTCCGGTGAAGAGCGACATCCCCTTTGTACCCACCGACCGCCGCGTCCTCCAGAAAGTGCTCACCCCCGAGGAGGT
GGATATCGTTCTCGCCGGCGAGGCTGCCCTCTACCGGGGGCAGGGGAGCGAGGCCGAAAGGATATTTGCCCCCATCGTCA
CCGTTCAATCGCCGGTGAAAGCCCTGGCCTACTACCGTCTTGGCGAGGCCCGCACCATGCTCCAGAAATACGGCGAGGCC
CTGCGGGACTTTCGGGAGGGGGAAAAGCTCCTGCCCGAGTTCCTGGCCCAGTCGCCAGGAACGGCCTTTGCCTACGCCGA
TGCCGTAGTCCGCAGCGGCGACCTGGAGGGGGGGCGCAGGATGCTGGGACGCCTCATTGCGAGCCTTGCCGACAAGAAGT
TTGCGCCGGTGCTCCTGGTGAGGCTGGCCGACATCCTTTCCCGCCAGGGGAAGGAGATGGCGGCAGAGGCCATCTACCGG
ACTGTCGCGGAAAACTTCCCGGACAACAAGGCGAAGTGGCAGGCACGGATGAAGCTTGCCGACCGCAAGTTCATGACGAT
CGAGCCGGCCACCTTCAGGGGGCTCGTGGACGAGTATCTGGAGATCAACCGGAACAGCGACTTTTCCCTCCGTGAGGAGT
CGCTCTTCAAGGCGGCGCTTCTTACCGCCCTCTTCGGCGAGGCCCCGGACGGCTTCGCCCTCGTCTCCGAGTACGAAAAG
AAGTTCTCCCGGGGCACCTACATAAGCGTCGCCCGGGGGATGCGGGAAGAGCTCATCGTGCCGATGGTCCGGGTGTTGAT
TCAGGCCAAGGATTTTCCTGCCCTCATCACGCTGGCCCAGGAGAACCGGGACTACCTGGGGAGGTGCATCGCCGATCCCG
ATTTCGTGCGCAGCCTCGTCATCGCTTTTGCCGATCAGGGACGCTTCTCGGAAGAAGCGGAGCTCTTCTCGTACCTGGCC
GGCAAGGATTGGAGCGCCCCCCAGGCACCCGAACTCTACCGTCGGATCATCGAGGCCGCGGAGCGGACCGGCGACATCCC
CTTGCTGGAAAATTCAGCCGACAACTTTCTGAGGCGCTTTCCCGATCATCCCCTGGCCCAGGGGTACCGGGAGCGGGTGG
CGGCCCTCGACTACAGCCGGGGAAATCTGCCCAAGGTAGCGGCGCGGCTCGCCCCCCTCCTGACGGGCAAGGGGCGTCCC
GATGACGTGGAAAGCTACTACATCCTTGGCAAATCCCTGGAAAGCGCGGGCAACAAAAAAGACGCGGAGCGGGCCATGAT
CCTCTTCCTGTCAGAACTCCGACAGCGGGGGGGGACGTCGGAACTGGCGCCCGACGCCCATTACGTGGCTGCCTCGGCCC
GGCTTGCGAGGGGTGACCGGAAAGGTGCCATGGAACTCCTCCGGGCCGGGAGTACCGCGGCCCCCGAGGCCCAGCGGGAC
CCGTTCCTCTACAAGATGGGGGAGATTGCCCGCCTTGAGGGGCGCAACGACGAGGCCGCCGGCCACTTCAAGGCGGTTGC
CGACAAGGGGAAAGACCCCGTCTGGCAGCAGATGGCCGCCCAGGCCCTGGCCGACATGGAGCTGAAAAAGAAACTGGCGA
CGCAGGTGAAGTTGTCAAAATAG

Upstream 100 bases:

>100_bases
GTCCCGAATCCCCCTGTTTGACGCCTCGCCGTAACGGCACGACTTTTGCCGTTCGTGATGGGGGGATTGCGCCCCGGACT
TCACTCAAGGTGTCATGACC

Downstream 100 bases:

>100_bases
TGACTAAAGAGAAGGTTTGGAATTCAGAAGTCAGGAGTCAGCAGTCAGAATGAAAGACATTGAAAATTCTGGATTCTGAA
TTCTGACTCCTGACTTCTTT

Product: tetratricopeptide TPR_4

Products: NA

Alternate protein names: TPR Domain Protein; Tetratricopeptide Domain Protein; Lipoprotein

Number of amino acids: Translated: 700; Mature: 700

Protein sequence:

>700_residues
MNRLLKTALGCALLLLTILATADPGRADDRNRLRRIDVRPRSGFTRLMLKLDREPAYTLTPLAGNRVRVTLRDTDGARWK
RLRSYSDPNIAGCAVARRRGDLLVTVGVKGDPRGVRAIAMPGVAALTLDVGSRLAPSRTSPFAQGRDGIKVGVEQLVSRF
DPPVKSDIPFVPTDRRVLQKVLTPEEVDIVLAGEAALYRGQGSEAERIFAPIVTVQSPVKALAYYRLGEARTMLQKYGEA
LRDFREGEKLLPEFLAQSPGTAFAYADAVVRSGDLEGGRRMLGRLIASLADKKFAPVLLVRLADILSRQGKEMAAEAIYR
TVAENFPDNKAKWQARMKLADRKFMTIEPATFRGLVDEYLEINRNSDFSLREESLFKAALLTALFGEAPDGFALVSEYEK
KFSRGTYISVARGMREELIVPMVRVLIQAKDFPALITLAQENRDYLGRCIADPDFVRSLVIAFADQGRFSEEAELFSYLA
GKDWSAPQAPELYRRIIEAAERTGDIPLLENSADNFLRRFPDHPLAQGYRERVAALDYSRGNLPKVAARLAPLLTGKGRP
DDVESYYILGKSLESAGNKKDAERAMILFLSELRQRGGTSELAPDAHYVAASARLARGDRKGAMELLRAGSTAAPEAQRD
PFLYKMGEIARLEGRNDEAAGHFKAVADKGKDPVWQQMAAQALADMELKKKLATQVKLSK

Sequences:

>Translated_700_residues
MNRLLKTALGCALLLLTILATADPGRADDRNRLRRIDVRPRSGFTRLMLKLDREPAYTLTPLAGNRVRVTLRDTDGARWK
RLRSYSDPNIAGCAVARRRGDLLVTVGVKGDPRGVRAIAMPGVAALTLDVGSRLAPSRTSPFAQGRDGIKVGVEQLVSRF
DPPVKSDIPFVPTDRRVLQKVLTPEEVDIVLAGEAALYRGQGSEAERIFAPIVTVQSPVKALAYYRLGEARTMLQKYGEA
LRDFREGEKLLPEFLAQSPGTAFAYADAVVRSGDLEGGRRMLGRLIASLADKKFAPVLLVRLADILSRQGKEMAAEAIYR
TVAENFPDNKAKWQARMKLADRKFMTIEPATFRGLVDEYLEINRNSDFSLREESLFKAALLTALFGEAPDGFALVSEYEK
KFSRGTYISVARGMREELIVPMVRVLIQAKDFPALITLAQENRDYLGRCIADPDFVRSLVIAFADQGRFSEEAELFSYLA
GKDWSAPQAPELYRRIIEAAERTGDIPLLENSADNFLRRFPDHPLAQGYRERVAALDYSRGNLPKVAARLAPLLTGKGRP
DDVESYYILGKSLESAGNKKDAERAMILFLSELRQRGGTSELAPDAHYVAASARLARGDRKGAMELLRAGSTAAPEAQRD
PFLYKMGEIARLEGRNDEAAGHFKAVADKGKDPVWQQMAAQALADMELKKKLATQVKLSK
>Mature_700_residues
MNRLLKTALGCALLLLTILATADPGRADDRNRLRRIDVRPRSGFTRLMLKLDREPAYTLTPLAGNRVRVTLRDTDGARWK
RLRSYSDPNIAGCAVARRRGDLLVTVGVKGDPRGVRAIAMPGVAALTLDVGSRLAPSRTSPFAQGRDGIKVGVEQLVSRF
DPPVKSDIPFVPTDRRVLQKVLTPEEVDIVLAGEAALYRGQGSEAERIFAPIVTVQSPVKALAYYRLGEARTMLQKYGEA
LRDFREGEKLLPEFLAQSPGTAFAYADAVVRSGDLEGGRRMLGRLIASLADKKFAPVLLVRLADILSRQGKEMAAEAIYR
TVAENFPDNKAKWQARMKLADRKFMTIEPATFRGLVDEYLEINRNSDFSLREESLFKAALLTALFGEAPDGFALVSEYEK
KFSRGTYISVARGMREELIVPMVRVLIQAKDFPALITLAQENRDYLGRCIADPDFVRSLVIAFADQGRFSEEAELFSYLA
GKDWSAPQAPELYRRIIEAAERTGDIPLLENSADNFLRRFPDHPLAQGYRERVAALDYSRGNLPKVAARLAPLLTGKGRP
DDVESYYILGKSLESAGNKKDAERAMILFLSELRQRGGTSELAPDAHYVAASARLARGDRKGAMELLRAGSTAAPEAQRD
PFLYKMGEIARLEGRNDEAAGHFKAVADKGKDPVWQQMAAQALADMELKKKLATQVKLSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77458; Mature: 77458

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLLKTALGCALLLLTILATADPGRADDRNRLRRIDVRPRSGFTRLMLKLDREPAYTLT
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEECCCCCCCHHHHHHHCCCCCCEEEE
PLAGNRVRVTLRDTDGARWKRLRSYSDPNIAGCAVARRRGDLLVTVGVKGDPRGVRAIAM
CCCCCEEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCEEEEC
PGVAALTLDVGSRLAPSRTSPFAQGRDGIKVGVEQLVSRFDPPVKSDIPFVPTDRRVLQK
CCCEEEEEHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
VLTPEEVDIVLAGEAALYRGQGSEAERIFAPIVTVQSPVKALAYYRLGEARTMLQKYGEA
HCCCCCEEEEEECCHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRDFREGEKLLPEFLAQSPGTAFAYADAVVRSGDLEGGRRMLGRLIASLADKKFAPVLLV
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
RLADILSRQGKEMAAEAIYRTVAENFPDNKAKWQARMKLADRKFMTIEPATFRGLVDEYL
HHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHH
EINRNSDFSLREESLFKAALLTALFGEAPDGFALVSEYEKKFSRGTYISVARGMREELIV
HCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHCCHHHHHH
PMVRVLIQAKDFPALITLAQENRDYLGRCIADPDFVRSLVIAFADQGRFSEEAELFSYLA
HHHHHHHHCCCCCCEEEEHHCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH
GKDWSAPQAPELYRRIIEAAERTGDIPLLENSADNFLRRFPDHPLAQGYRERVAALDYSR
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCC
GNLPKVAARLAPLLTGKGRPDDVESYYILGKSLESAGNKKDAERAMILFLSELRQRGGTS
CCCHHHHHHHHHHHCCCCCCCCCCHHHEEHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
ELAPDAHYVAASARLARGDRKGAMELLRAGSTAAPEAQRDPFLYKMGEIARLEGRNDEAA
CCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCCC
GHFKAVADKGKDPVWQQMAAQALADMELKKKLATQVKLSK
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNRLLKTALGCALLLLTILATADPGRADDRNRLRRIDVRPRSGFTRLMLKLDREPAYTLT
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEECCCCCCCHHHHHHHCCCCCCEEEE
PLAGNRVRVTLRDTDGARWKRLRSYSDPNIAGCAVARRRGDLLVTVGVKGDPRGVRAIAM
CCCCCEEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCEEEEC
PGVAALTLDVGSRLAPSRTSPFAQGRDGIKVGVEQLVSRFDPPVKSDIPFVPTDRRVLQK
CCCEEEEEHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
VLTPEEVDIVLAGEAALYRGQGSEAERIFAPIVTVQSPVKALAYYRLGEARTMLQKYGEA
HCCCCCEEEEEECCHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRDFREGEKLLPEFLAQSPGTAFAYADAVVRSGDLEGGRRMLGRLIASLADKKFAPVLLV
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
RLADILSRQGKEMAAEAIYRTVAENFPDNKAKWQARMKLADRKFMTIEPATFRGLVDEYL
HHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHH
EINRNSDFSLREESLFKAALLTALFGEAPDGFALVSEYEKKFSRGTYISVARGMREELIV
HCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHCCHHHHHH
PMVRVLIQAKDFPALITLAQENRDYLGRCIADPDFVRSLVIAFADQGRFSEEAELFSYLA
HHHHHHHHCCCCCCEEEEHHCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH
GKDWSAPQAPELYRRIIEAAERTGDIPLLENSADNFLRRFPDHPLAQGYRERVAALDYSR
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCC
GNLPKVAARLAPLLTGKGRPDDVESYYILGKSLESAGNKKDAERAMILFLSELRQRGGTS
CCCHHHHHHHHHHHCCCCCCCCCCHHHEEHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
ELAPDAHYVAASARLARGDRKGAMELLRAGSTAAPEAQRDPFLYKMGEIARLEGRNDEAA
CCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCCC
GHFKAVADKGKDPVWQQMAAQALADMELKKKLATQVKLSK
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA