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The map label for this gene is flgC [H]

Identifier: 78224306

GI number: 78224306

Start: 3512694

End: 3513137

Strand: Reverse

Name: flgC [H]

Synonym: Gmet_3114

Alternate gene names: 78224306

Gene position: 3513137-3512694 (Counterclockwise)

Preceding gene: 78224307

Following gene: 78224305

Centisome position: 87.89

GC content: 65.77

Gene sequence:

>444_bases
ATGGATTTCTTCAGCGCCATGCAGATCAGCTCTTCCGCTCTCTCTGCCGAGCGGACGCGGATGAACCTCATCTCCTCCAA
CATCGCCAACGCCAACTCCACCCGCACCGCCGAGGGCGGTCCCTACAAGCGCAAGGACGCCGTCTTTGCCGCGACCCCGG
CTGCCGAAAAGTTCCAGGCGGCCATGGAGCGGATGCGGCGCGGCACAAGCCCCGCAGGGGTCCAGGTGACCCAGGTCATC
GAAGACCAGAACCCGCCCCGGCTCCAGTACGACCCCACCCATCCGGACGCCAATGCCCAGGGGTACGTGGCGCTCCCCAA
CGTGAACGTGGTGGAGGAAATGGCCGACATGATCGCCGCCACCCGGGCCTACGAGGCCAATGTCACGGCGGTGCAGGCCG
CCAAGGGTATGGCCCTCAAGACCCTGGAACTCGGGTCACGCTAA

Upstream 100 bases:

>100_bases
TGTCCCGCATGGCGGAAAACCAGATCATGTACAACGCCTCGATCCAGATCCTCTCCAAGCAGTTCAACGAAATCAAATCC
GCTATCAGGGAGAATAAATA

Downstream 100 bases:

>100_bases
TCGGTTTCATTTTTTTGACGTAAAAAAAAGGGTGCGACGCAGGCACCCTATGGAAGTTTATCGGCCGCACGTAGTGAAAC
GCTAGAGTTTTTCAGGAGGG

Product: flagellar basal-body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MDFFSAMQISSSALSAERTRMNLISSNIANANSTRTAEGGPYKRKDAVFAATPAAEKFQAAMERMRRGTSPAGVQVTQVI
EDQNPPRLQYDPTHPDANAQGYVALPNVNVVEEMADMIAATRAYEANVTAVQAAKGMALKTLELGSR

Sequences:

>Translated_147_residues
MDFFSAMQISSSALSAERTRMNLISSNIANANSTRTAEGGPYKRKDAVFAATPAAEKFQAAMERMRRGTSPAGVQVTQVI
EDQNPPRLQYDPTHPDANAQGYVALPNVNVVEEMADMIAATRAYEANVTAVQAAKGMALKTLELGSR
>Mature_147_residues
MDFFSAMQISSSALSAERTRMNLISSNIANANSTRTAEGGPYKRKDAVFAATPAAEKFQAAMERMRRGTSPAGVQVTQVI
EDQNPPRLQYDPTHPDANAQGYVALPNVNVVEEMADMIAATRAYEANVTAVQAAKGMALKTLELGSR

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=145, Percent_Identity=41.3793103448276, Blast_Score=113, Evalue=7e-27,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 15809; Mature: 15809

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFFSAMQISSSALSAERTRMNLISSNIANANSTRTAEGGPYKRKDAVFAATPAAEKFQA
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHH
AMERMRRGTSPAGVQVTQVIEDQNPPRLQYDPTHPDANAQGYVALPNVNVVEEMADMIAA
HHHHHHCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHH
TRAYEANVTAVQAAKGMALKTLELGSR
HHHCCCCCHHHHHHCCCEEEEECCCCC
>Mature Secondary Structure
MDFFSAMQISSSALSAERTRMNLISSNIANANSTRTAEGGPYKRKDAVFAATPAAEKFQA
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHH
AMERMRRGTSPAGVQVTQVIEDQNPPRLQYDPTHPDANAQGYVALPNVNVVEEMADMIAA
HHHHHHCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHH
TRAYEANVTAVQAAKGMALKTLELGSR
HHHCCCCCHHHHHHCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1905667; 9384377 [H]