Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222667
Identifier: 78222667
GI number: 78222667
Start: 1624761
End: 1625570
Strand: Direct
Name: 78222667
Synonym: Gmet_1455
Alternate gene names: NA
Gene position: 1624761-1625570 (Clockwise)
Preceding gene: 78222660
Following gene: 78222668
Centisome position: 40.65
GC content: 64.07
Gene sequence:
>810_bases ATGTATAGATATGCACGTAAGTATGCTTTTACTGTCGTTGCCGTGGGTCTGGTCGCAGGTTGCGCCGCTCCGGAGAGGGG CGGATTGATCAAGGCCGGCGACCCGGTGCGGGTTACTTATACCTGCTTCGACGGTACCGGTGCCCTGGCGGCAACCAATG TCCGGGAAGCGGCGGGAAACAACGGAGTCAAAAAGGGGCCGCTTTTTCTTCCTTCCCGTGATTATTCACCCCTGCAACTC ACGGCAGGAACCAGGCCCGAGGCGAAGGACAGGGGTGTTGACGACGAACTGGCAGCCGGCCTGGCCGGGGCGGTGGTGGG CAAGGGAGTCGGCGAGGTGGCAAGCGTTGAACTGGCCGGCGGCCCCCTGGAAGGACTGTCCGGCGGAGACCGTTACCTGA AGATGGCCACGGTCCGCAAAAGAGCCAAGGAGCTGCGGCTGGGGAGGGAGGAATATCTCACCAGGACCGGCCGCGAGCCG GAGAAAGGGCGCAGGTTCGTGCTCGATCCGGCCCTGCCGGGGATAGTCGAAGAGGTTACCGACAAAGAGGTGGTCATCCG TTTCCCCCTCCCCGACGGGGGCGTGGTGCAGACCCCCTTCGGACCGGGCACTGTGCGGGACGGGGGCGACCAGTGGGAGA TCGTCATCGATGCCGCCGTGGGGCGGATCGTGCGAAGCGGCCCATTGGCGGGAAGGATCAGCGACGTGAACGAGCGGTTC TTTACCATCGACTACGGCTATCCCTTTGGCGGTGAGTCGCTGCGGTGCGACGTGAAGGCGGAGAGGTCGGAGCAGGTGGG GAAACGCTGA
Upstream 100 bases:
>100_bases AAAAAATCATCATGTCCGAAGCGAATCTGTAACAAACAGCTGATAGGGTGCGTCGGTCCGTGAGGGTGCCGATGGATGAG CTGAAAGGCGAGGTAGTCAT
Downstream 100 bases:
>100_bases GAGACAAGGGAGCGGCCACGATGAACAGAACAGCCACGTCAAAAATAGTTGCCATGATGCTTGTTGTCGCGGTGGCCATC CCGGCCCTGGCGGCTGAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MYRYARKYAFTVVAVGLVAGCAAPERGGLIKAGDPVRVTYTCFDGTGALAATNVREAAGNNGVKKGPLFLPSRDYSPLQL TAGTRPEAKDRGVDDELAAGLAGAVVGKGVGEVASVELAGGPLEGLSGGDRYLKMATVRKRAKELRLGREEYLTRTGREP EKGRRFVLDPALPGIVEEVTDKEVVIRFPLPDGGVVQTPFGPGTVRDGGDQWEIVIDAAVGRIVRSGPLAGRISDVNERF FTIDYGYPFGGESLRCDVKAERSEQVGKR
Sequences:
>Translated_269_residues MYRYARKYAFTVVAVGLVAGCAAPERGGLIKAGDPVRVTYTCFDGTGALAATNVREAAGNNGVKKGPLFLPSRDYSPLQL TAGTRPEAKDRGVDDELAAGLAGAVVGKGVGEVASVELAGGPLEGLSGGDRYLKMATVRKRAKELRLGREEYLTRTGREP EKGRRFVLDPALPGIVEEVTDKEVVIRFPLPDGGVVQTPFGPGTVRDGGDQWEIVIDAAVGRIVRSGPLAGRISDVNERF FTIDYGYPFGGESLRCDVKAERSEQVGKR >Mature_269_residues MYRYARKYAFTVVAVGLVAGCAAPERGGLIKAGDPVRVTYTCFDGTGALAATNVREAAGNNGVKKGPLFLPSRDYSPLQL TAGTRPEAKDRGVDDELAAGLAGAVVGKGVGEVASVELAGGPLEGLSGGDRYLKMATVRKRAKELRLGREEYLTRTGREP EKGRRFVLDPALPGIVEEVTDKEVVIRFPLPDGGVVQTPFGPGTVRDGGDQWEIVIDAAVGRIVRSGPLAGRISDVNERF FTIDYGYPFGGESLRCDVKAERSEQVGKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28656; Mature: 28656
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRYARKYAFTVVAVGLVAGCAAPERGGLIKAGDPVRVTYTCFDGTGALAATNVREAAGN CCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEEEECCCCCEEECCHHHHHCC NGVKKGPLFLPSRDYSPLQLTAGTRPEAKDRGVDDELAAGLAGAVVGKGVGEVASVELAG CCCCCCCEECCCCCCCCEEEECCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEECC GPLEGLSGGDRYLKMATVRKRAKELRLGREEYLTRTGREPEKGRRFVLDPALPGIVEEVT CCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEECCCCCHHHHHCC DKEVVIRFPLPDGGVVQTPFGPGTVRDGGDQWEIVIDAAVGRIVRSGPLAGRISDVNERF CCEEEEEEECCCCCEEECCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCCCCCCCEE FTIDYGYPFGGESLRCDVKAERSEQVGKR EEEECCCCCCCCCEEEEEECHHHHCCCCC >Mature Secondary Structure MYRYARKYAFTVVAVGLVAGCAAPERGGLIKAGDPVRVTYTCFDGTGALAATNVREAAGN CCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEEEECCCCCEEECCHHHHHCC NGVKKGPLFLPSRDYSPLQLTAGTRPEAKDRGVDDELAAGLAGAVVGKGVGEVASVELAG CCCCCCCEECCCCCCCCEEEECCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEECC GPLEGLSGGDRYLKMATVRKRAKELRLGREEYLTRTGREPEKGRRFVLDPALPGIVEEVT CCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEECCCCCHHHHHCC DKEVVIRFPLPDGGVVQTPFGPGTVRDGGDQWEIVIDAAVGRIVRSGPLAGRISDVNERF CCEEEEEEECCCCCEEECCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCCCCCCCEE FTIDYGYPFGGESLRCDVKAERSEQVGKR EEEECCCCCCCCCEEEEEECHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA