Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222660
Identifier: 78222660
GI number: 78222660
Start: 1618473
End: 1619456
Strand: Direct
Name: 78222660
Synonym: Gmet_1448
Alternate gene names: NA
Gene position: 1618473-1619456 (Clockwise)
Preceding gene: 78222659
Following gene: 78222667
Centisome position: 40.49
GC content: 62.09
Gene sequence:
>984_bases GTGGAACTCGCCGCAGGTCATGACGGGGGCACGATCCGGGCCATCAGGTTCGCGGTCGTTGCCCTCGTCCTGTTTCTGGC TGAATTCCTGGCCCCGGAGGCCGTCTTCGAGCCCCTCAACCGCACCACCGCCATCATGACGGCGGAACTCTTGGGGCTCA TGGGGCGCCATGCCCAGGCAGCAGGCACCCTGGTACGGCTCGACGGCTTCTCTGCCCGGGTCGTGACGGAATGCTCCGTC ATCAACCCCGCCATCCTTTTTGCCTCCTTCGTCCTTGGTTCCGGCGCCTCTCCCCGCGCTAAGGCTGCCGGCATCCTGGC CGGTATTCCCATCCTCAACTCAATCAATGTCCTTCGCATTGCCGCTGTCATTGCCACGGGCGCGGCGGTTCCAGCCCTCT TCGAGGCGGTTCACGTCTACGTCGGTCAGATACTCATGGTGGGCGTGGTGTTATTCGGGGCGATTCTCTGGAGCCGGTGG GCCTCCGCCGATGGGGTTGCAACCTTTCCGTTTGTTCCCGGGGTACTGGCGTGGTCGGTGGTTCTCTTCGTTCCGTGGCT CTTCATGAACCGTTGGTACGTTGCCGTGGGCGATATACCGCTCAGGTTTTTGTTTGAAATGGCCGGAAGGCCCGTGGAGC TTCCCGTCGAGCGTCCTCTCTACTACCAGACCTTCAACAGCGTCCTTTTCGCGTCACTGGTCCTGGCGACAGGCTCCATC CCGATCCGGCGAAAAGCCGTATTCCTTGCAGGGGGGCTGGCTCTGCTGGCCGTGGGGCATCAGCTCTTCCGCGTCTGTAA CATCCTCTTGTCCGCTTTCGGCATCCGGGAGGCCTACCTTGCCTCCGTGGCCATTCATGAAATCCTCGGATATCTCCTGC CGTTTCTGCTGTGGTTCATCCTGTGCCATGGGGTATCAAGACCGTCTGCGCACCGCCAGGGCTCCGCCGAGAAAGACCGC CGAGAGGCCGATACCCCAAGGTGA
Upstream 100 bases:
>100_bases CCCATGTCCGAAGTCACCCGGGCGATCAGGATGCTCCCCCGGGAGAAGGTGCTGGGGGTGGTGCTGAACCGCCGGCGCAG GGGCGACGCGTAGCAAAGAC
Downstream 100 bases:
>100_bases CATCGCCGGCACGAAATTCGAGTCCGGCAACCCCATTGACGAAAAAAGATCGAGCCGCGGGAAGACCCCGCCGGTGCGCT GGTCGGTCACCGGTTTTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MELAAGHDGGTIRAIRFAVVALVLFLAEFLAPEAVFEPLNRTTAIMTAELLGLMGRHAQAAGTLVRLDGFSARVVTECSV INPAILFASFVLGSGASPRAKAAGILAGIPILNSINVLRIAAVIATGAAVPALFEAVHVYVGQILMVGVVLFGAILWSRW ASADGVATFPFVPGVLAWSVVLFVPWLFMNRWYVAVGDIPLRFLFEMAGRPVELPVERPLYYQTFNSVLFASLVLATGSI PIRRKAVFLAGGLALLAVGHQLFRVCNILLSAFGIREAYLASVAIHEILGYLLPFLLWFILCHGVSRPSAHRQGSAEKDR READTPR
Sequences:
>Translated_327_residues MELAAGHDGGTIRAIRFAVVALVLFLAEFLAPEAVFEPLNRTTAIMTAELLGLMGRHAQAAGTLVRLDGFSARVVTECSV INPAILFASFVLGSGASPRAKAAGILAGIPILNSINVLRIAAVIATGAAVPALFEAVHVYVGQILMVGVVLFGAILWSRW ASADGVATFPFVPGVLAWSVVLFVPWLFMNRWYVAVGDIPLRFLFEMAGRPVELPVERPLYYQTFNSVLFASLVLATGSI PIRRKAVFLAGGLALLAVGHQLFRVCNILLSAFGIREAYLASVAIHEILGYLLPFLLWFILCHGVSRPSAHRQGSAEKDR READTPR >Mature_327_residues MELAAGHDGGTIRAIRFAVVALVLFLAEFLAPEAVFEPLNRTTAIMTAELLGLMGRHAQAAGTLVRLDGFSARVVTECSV INPAILFASFVLGSGASPRAKAAGILAGIPILNSINVLRIAAVIATGAAVPALFEAVHVYVGQILMVGVVLFGAILWSRW ASADGVATFPFVPGVLAWSVVLFVPWLFMNRWYVAVGDIPLRFLFEMAGRPVELPVERPLYYQTFNSVLFASLVLATGSI PIRRKAVFLAGGLALLAVGHQLFRVCNILLSAFGIREAYLASVAIHEILGYLLPFLLWFILCHGVSRPSAHRQGSAEKDR READTPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35188; Mature: 35188
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELAAGHDGGTIRAIRFAVVALVLFLAEFLAPEAVFEPLNRTTAIMTAELLGLMGRHAQA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH AGTLVRLDGFSARVVTECSVINPAILFASFVLGSGASPRAKAAGILAGIPILNSINVLRI HCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHCCHHHHHH AAVIATGAAVPALFEAVHVYVGQILMVGVVLFGAILWSRWASADGVATFPFVPGVLAWSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHH VLFVPWLFMNRWYVAVGDIPLRFLFEMAGRPVELPVERPLYYQTFNSVLFASLVLATGSI HHHHHHHHHCCCEEEECCHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCC PIRRKAVFLAGGLALLAVGHQLFRVCNILLSAFGIREAYLASVAIHEILGYLLPFLLWFI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCHGVSRPSAHRQGSAEKDRREADTPR HHCCCCCCCHHCCCCCHHHHHCCCCCC >Mature Secondary Structure MELAAGHDGGTIRAIRFAVVALVLFLAEFLAPEAVFEPLNRTTAIMTAELLGLMGRHAQA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH AGTLVRLDGFSARVVTECSVINPAILFASFVLGSGASPRAKAAGILAGIPILNSINVLRI HCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHCCHHHHHH AAVIATGAAVPALFEAVHVYVGQILMVGVVLFGAILWSRWASADGVATFPFVPGVLAWSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHH VLFVPWLFMNRWYVAVGDIPLRFLFEMAGRPVELPVERPLYYQTFNSVLFASLVLATGSI HHHHHHHHHCCCEEEECCHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCC PIRRKAVFLAGGLALLAVGHQLFRVCNILLSAFGIREAYLASVAIHEILGYLLPFLLWFI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCHGVSRPSAHRQGSAEKDRREADTPR HHCCCCCCCHHCCCCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA