Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
---|---|
Accession | NC_007517 |
Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78222578
Identifier: 78222578
GI number: 78222578
Start: 1529556
End: 1530506
Strand: Direct
Name: 78222578
Synonym: Gmet_1366
Alternate gene names: NA
Gene position: 1529556-1530506 (Clockwise)
Preceding gene: 78222577
Following gene: 78222579
Centisome position: 38.26
GC content: 54.68
Gene sequence:
>951_bases ATGTTCCTCCTTCCCAAGGGAAACCCACTGTATGAGAACATAGCCGCTGCTAAGGTCAAGCTTCCTGATATGTTCGAGAA GCTCAAGGCAGGCGGGTTCACGGGCTACCTGAACTTTACGTTTCCCTCGGCAACGGCGATTCTCTTCTTTGAAGCCGGCA AGCTGATCAGTGCCGTGCATGAACAGGATGGGCGTAAGCTCACGGGGTTCGAAGCGATTGCTGGCGTCTGCACCCTTATT TTTGCTGGCGGTGGAAGTCTTAGTGTCTACAGGCTTTCCAAGGATCTGACCATGTGTTTGCACGCGATGATCCATGGGGA TGTCCTCTACGCGGGGCAGGAACTGAAGCTGATCGACATTAAGGGGCTCCTGGAGAAGATGAAAGCCCAGAGGCTCAATG GTTGTCTCAGGCTCTACACCGAGAGCCGCACAGCCCTTATTTTTTACAAGGAGGGGGCGCCTCTCGGTTTCTTTCATGAC GGCTCCACAGATATAGAAACATCGGCAACCGAGTCCCAGAAGATTGCAGGGCTACCGGGGGCAAAGATAGATGTGCTCTC CACGAAAAGCGCCGATGAGTTGATGCACTATGACCTTCTTGAGATGGTCAACGTGTCGAAGCTTTGGGAATCGACCAGCA GCAGATTCGCCTCTGAGCGCGACAAGATCCGCAATGAAGCTGCTGTTGTCGACCGGTACCAGGAAGAGGAAAAGCTTCGG GAACTTGAGGATGATCTGAAAGAAGTTGCCATGGCGTACGTGGGGAGGATGGGGGCTGCCCTCGTGGAGAAGGAACTGAA TGACCGGGGGGGACGGCGGGCACTCCAGGATAGTGCGCTTGTCGGCGCGTTTCTGGCCGGGGTGGAAAAGGGGGCAAAGC TGCTCACCAGCATGTCCAAGACTAAGGAGATGCTGGACACCATGAAGGAAGAGATTGCCCGGCGGATTTAA
Upstream 100 bases:
>100_bases AGTATGAGTGCTTAATCGGCCTGGATTACCTCTACTTAGGCTTTGACTCCCGCACACAAATCGATTACTTTGTGAAAAAC CTCTGACCAAGGAGACCGGG
Downstream 100 bases:
>100_bases CAGGCTGTAGATGATTTTTTCCGAGTAGTTGGGGGGACAATGGCGGACATCACCACGGTTGACCTTGTACAAATAACATT CTGGTTCCTGGCGGGATGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MFLLPKGNPLYENIAAAKVKLPDMFEKLKAGGFTGYLNFTFPSATAILFFEAGKLISAVHEQDGRKLTGFEAIAGVCTLI FAGGGSLSVYRLSKDLTMCLHAMIHGDVLYAGQELKLIDIKGLLEKMKAQRLNGCLRLYTESRTALIFYKEGAPLGFFHD GSTDIETSATESQKIAGLPGAKIDVLSTKSADELMHYDLLEMVNVSKLWESTSSRFASERDKIRNEAAVVDRYQEEEKLR ELEDDLKEVAMAYVGRMGAALVEKELNDRGGRRALQDSALVGAFLAGVEKGAKLLTSMSKTKEMLDTMKEEIARRI
Sequences:
>Translated_316_residues MFLLPKGNPLYENIAAAKVKLPDMFEKLKAGGFTGYLNFTFPSATAILFFEAGKLISAVHEQDGRKLTGFEAIAGVCTLI FAGGGSLSVYRLSKDLTMCLHAMIHGDVLYAGQELKLIDIKGLLEKMKAQRLNGCLRLYTESRTALIFYKEGAPLGFFHD GSTDIETSATESQKIAGLPGAKIDVLSTKSADELMHYDLLEMVNVSKLWESTSSRFASERDKIRNEAAVVDRYQEEEKLR ELEDDLKEVAMAYVGRMGAALVEKELNDRGGRRALQDSALVGAFLAGVEKGAKLLTSMSKTKEMLDTMKEEIARRI >Mature_316_residues MFLLPKGNPLYENIAAAKVKLPDMFEKLKAGGFTGYLNFTFPSATAILFFEAGKLISAVHEQDGRKLTGFEAIAGVCTLI FAGGGSLSVYRLSKDLTMCLHAMIHGDVLYAGQELKLIDIKGLLEKMKAQRLNGCLRLYTESRTALIFYKEGAPLGFFHD GSTDIETSATESQKIAGLPGAKIDVLSTKSADELMHYDLLEMVNVSKLWESTSSRFASERDKIRNEAAVVDRYQEEEKLR ELEDDLKEVAMAYVGRMGAALVEKELNDRGGRRALQDSALVGAFLAGVEKGAKLLTSMSKTKEMLDTMKEEIARRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34839; Mature: 34839
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLLPKGNPLYENIAAAKVKLPDMFEKLKAGGFTGYLNFTFPSATAILFFEAGKLISAVH CEECCCCCCHHHHHHHHHCCCHHHHHHHHCCCEEEEEEEECCCCEEEEEEHHHHHHHHHH EQDGRKLTGFEAIAGVCTLIFAGGGSLSVYRLSKDLTMCLHAMIHGDVLYAGQELKLIDI HHCCCEEHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCEECCCCEEEEEH KGLLEKMKAQRLNGCLRLYTESRTALIFYKEGAPLGFFHDGSTDIETSATESQKIAGLPG HHHHHHHHHHHHHHHHHEEECCCEEEEEEECCCCEEEECCCCCCCCCCCCCCHHHCCCCC AKIDVLSTKSADELMHYDLLEMVNVSKLWESTSSRFASERDKIRNEAAVVDRYQEEEKLR CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELEDDLKEVAMAYVGRMGAALVEKELNDRGGRRALQDSALVGAFLAGVEKGAKLLTSMSK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TKEMLDTMKEEIARRI HHHHHHHHHHHHHHCC >Mature Secondary Structure MFLLPKGNPLYENIAAAKVKLPDMFEKLKAGGFTGYLNFTFPSATAILFFEAGKLISAVH CEECCCCCCHHHHHHHHHCCCHHHHHHHHCCCEEEEEEEECCCCEEEEEEHHHHHHHHHH EQDGRKLTGFEAIAGVCTLIFAGGGSLSVYRLSKDLTMCLHAMIHGDVLYAGQELKLIDI HHCCCEEHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCEECCCCEEEEEH KGLLEKMKAQRLNGCLRLYTESRTALIFYKEGAPLGFFHDGSTDIETSATESQKIAGLPG HHHHHHHHHHHHHHHHHEEECCCEEEEEEECCCCEEEECCCCCCCCCCCCCCHHHCCCCC AKIDVLSTKSADELMHYDLLEMVNVSKLWESTSSRFASERDKIRNEAAVVDRYQEEEKLR CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELEDDLKEVAMAYVGRMGAALVEKELNDRGGRRALQDSALVGAFLAGVEKGAKLLTSMSK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TKEMLDTMKEEIARRI HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA