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The map label for this gene is rpfG [H]

Identifier: 78222577

GI number: 78222577

Start: 1528304

End: 1529470

Strand: Direct

Name: rpfG [H]

Synonym: Gmet_1365

Alternate gene names: 78222577

Gene position: 1528304-1529470 (Clockwise)

Preceding gene: 78222576

Following gene: 78222578

Centisome position: 38.23

GC content: 51.5

Gene sequence:

>1167_bases
ATGACCTTGGAGCTTTGCAACACATCGCTACAGCAGACACAGGAACTCTTGCGGTTGGTAAACGCTACTCTCCGGAACCT
CTCGAACCGTAAGTTTACCGACAAGGAACTTCATGTTGAAGCTCTTGGCCGAGTTCTGGGCGGGAGCGGCAGGCGTGGCC
CTCTTAGTATCTTTATTCTTCTGAATGGCAAGGCAGGAGCTAGCCGCGGCAGAGTCTTCCATCTCAGTGCCGGGGAGATC
GTGGAGGGCTCTGAAGAGATTCTTATTGATCCTGCATCGGTCTATGCTCCGGAACGCCTTACGGATGAAGTTATCATCTC
CAATTGGTGTGATACCTGTGAAACGGTTGAGGAGTATCAAGCCTATTTTCATCCAACGGTAAAGGAGTACATGGGTAAGC
TCTTAACAAATTTCATCTGCTGTCACATAGGAGGTGACGCAGGTGGAGCGCTCCTGGCCTTTAACTATCCCGGTGAGGCT
ACGGAGTACGATGCAATGGTTCTTCAGAGTCTTGCCGTGGTTATCGGGTCGTTGACCACGTTATCCAACAGTGTCAGGGA
GACGGAGAAGGCTTTTATCTATACCATTGAATCCCTAGCACGGGCGTGCGAAGCTGCGGAGGAGGGTACTGGCGAACATA
TTGTCCGTGTCAACCGCTATGCAGGGGCTTTGGCTGCCAATATGGGGCTGCCGGTTGATCTTGTGGAAGTGATTTCCTAC
TCGGCGCAGATGCATGATGTGGGCAAAATCCGGGTACCGAATGAAATACTTCTTAAGCCAGCCCCCCTTAACGAAGACGA
ATTGCGTATCATGCGTCTACACCCCGCCTATGGTGAGAAGATCCTTGGTGATTCACCCCGACTGCAGATTGCCCGTGAGA
TTGCCATATCACACCACGAGAACTGGGACGGCAGTGGATATCCCCATGGTTTGCGCGGGGAGGATATTCCACTCTCCGGG
CGAATTGTGAAATTGGCTGATGTCTACGATGCCTTGCGCTCAAGGAGAAGCTACAAAGAGCCCTTAAGTCACGAGGAGGC
GCTTTCCGTCTTTACGGTTGGAGACAGGCGCATCGATCCGGGGCGCCATTTCGATCCTGCAGTTATGGCGACTTTCTTTG
CCATTGAACATATTTTTGCCCGAATTTATAAGAGTATGAGTGCTTAA

Upstream 100 bases:

>100_bases
CTTCTGTCGTTTTGGGGCTGGATCATTGCGGGAGGCGGTTTTATAGAGTATAACCAACAATGTATGGCAGGCAGTTGAAT
CTCTCCTGTGAGATTTTTTC

Downstream 100 bases:

>100_bases
TCGGCCTGGATTACCTCTACTTAGGCTTTGACTCCCGCACACAAATCGATTACTTTGTGAAAAACCTCTGACCAAGGAGA
CCGGGATGTTCCTCCTTCCC

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MTLELCNTSLQQTQELLRLVNATLRNLSNRKFTDKELHVEALGRVLGGSGRRGPLSIFILLNGKAGASRGRVFHLSAGEI
VEGSEEILIDPASVYAPERLTDEVIISNWCDTCETVEEYQAYFHPTVKEYMGKLLTNFICCHIGGDAGGALLAFNYPGEA
TEYDAMVLQSLAVVIGSLTTLSNSVRETEKAFIYTIESLARACEAAEEGTGEHIVRVNRYAGALAANMGLPVDLVEVISY
SAQMHDVGKIRVPNEILLKPAPLNEDELRIMRLHPAYGEKILGDSPRLQIAREIAISHHENWDGSGYPHGLRGEDIPLSG
RIVKLADVYDALRSRRSYKEPLSHEEALSVFTVGDRRIDPGRHFDPAVMATFFAIEHIFARIYKSMSA

Sequences:

>Translated_388_residues
MTLELCNTSLQQTQELLRLVNATLRNLSNRKFTDKELHVEALGRVLGGSGRRGPLSIFILLNGKAGASRGRVFHLSAGEI
VEGSEEILIDPASVYAPERLTDEVIISNWCDTCETVEEYQAYFHPTVKEYMGKLLTNFICCHIGGDAGGALLAFNYPGEA
TEYDAMVLQSLAVVIGSLTTLSNSVRETEKAFIYTIESLARACEAAEEGTGEHIVRVNRYAGALAANMGLPVDLVEVISY
SAQMHDVGKIRVPNEILLKPAPLNEDELRIMRLHPAYGEKILGDSPRLQIAREIAISHHENWDGSGYPHGLRGEDIPLSG
RIVKLADVYDALRSRRSYKEPLSHEEALSVFTVGDRRIDPGRHFDPAVMATFFAIEHIFARIYKSMSA
>Mature_387_residues
TLELCNTSLQQTQELLRLVNATLRNLSNRKFTDKELHVEALGRVLGGSGRRGPLSIFILLNGKAGASRGRVFHLSAGEIV
EGSEEILIDPASVYAPERLTDEVIISNWCDTCETVEEYQAYFHPTVKEYMGKLLTNFICCHIGGDAGGALLAFNYPGEAT
EYDAMVLQSLAVVIGSLTTLSNSVRETEKAFIYTIESLARACEAAEEGTGEHIVRVNRYAGALAANMGLPVDLVEVISYS
AQMHDVGKIRVPNEILLKPAPLNEDELRIMRLHPAYGEKILGDSPRLQIAREIAISHHENWDGSGYPHGLRGEDIPLSGR
IVKLADVYDALRSRRSYKEPLSHEEALSVFTVGDRRIDPGRHFDPAVMATFFAIEHIFARIYKSMSA

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG3437

COG function: function code KT; Response regulator containing a CheY-like receiver domain and an HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 42869; Mature: 42738

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLELCNTSLQQTQELLRLVNATLRNLSNRKFTDKELHVEALGRVLGGSGRRGPLSIFIL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEE
LNGKAGASRGRVFHLSAGEIVEGSEEILIDPASVYAPERLTDEVIISNWCDTCETVEEYQ
EECCCCCCCCEEEEEECCCCCCCCCCEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AYFHPTVKEYMGKLLTNFICCHIGGDAGGALLAFNYPGEATEYDAMVLQSLAVVIGSLTT
HHHCHHHHHHHHHHHHHHEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
LSNSVRETEKAFIYTIESLARACEAAEEGTGEHIVRVNRYAGALAANMGLPVDLVEVISY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHH
SAQMHDVGKIRVPNEILLKPAPLNEDELRIMRLHPAYGEKILGDSPRLQIAREIAISHHE
HHHHHCCCCEECCHHHEECCCCCCCCCEEEEEECCCCCCHHCCCCCHHHHHHHHHHHCCC
NWDGSGYPHGLRGEDIPLSGRIVKLADVYDALRSRRSYKEPLSHEEALSVFTVGDRRIDP
CCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHEEEEEECCCCCCC
GRHFDPAVMATFFAIEHIFARIYKSMSA
CCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLELCNTSLQQTQELLRLVNATLRNLSNRKFTDKELHVEALGRVLGGSGRRGPLSIFIL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEE
LNGKAGASRGRVFHLSAGEIVEGSEEILIDPASVYAPERLTDEVIISNWCDTCETVEEYQ
EECCCCCCCCEEEEEECCCCCCCCCCEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AYFHPTVKEYMGKLLTNFICCHIGGDAGGALLAFNYPGEATEYDAMVLQSLAVVIGSLTT
HHHCHHHHHHHHHHHHHHEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
LSNSVRETEKAFIYTIESLARACEAAEEGTGEHIVRVNRYAGALAANMGLPVDLVEVISY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHH
SAQMHDVGKIRVPNEILLKPAPLNEDELRIMRLHPAYGEKILGDSPRLQIAREIAISHHE
HHHHHCCCCEECCHHHEECCCCCCCCCEEEEEECCCCCCHHCCCCCHHHHHHHHHHHCCC
NWDGSGYPHGLRGEDIPLSGRIVKLADVYDALRSRRSYKEPLSHEEALSVFTVGDRRIDP
CCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHEEEEEECCCCCCC
GRHFDPAVMATFFAIEHIFARIYKSMSA
CCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]