Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222579
Identifier: 78222579
GI number: 78222579
Start: 1530546
End: 1531283
Strand: Direct
Name: 78222579
Synonym: Gmet_1367
Alternate gene names: NA
Gene position: 1530546-1531283 (Clockwise)
Preceding gene: 78222578
Following gene: 78222580
Centisome position: 38.29
GC content: 53.39
Gene sequence:
>738_bases ATGGCGGACATCACCACGGTTGACCTTGTACAAATAACATTCTGGTTCCTGGCGGGATGTATCAGTTTTTACTTCAGTAT CGGTAATGCCCGGGTCTGGACCAGTATTTCGCTGGGATTCTTCCTCATTTTCCTGAGCCAGCTCTATGTGGTGGAGAAGG CCCTCGATATGCCGTGGACCGCCTATACCCAGCTTGAGGCCATCCACTACATTATCGGCACCATCTCTATCATGGTCATG ACCCACGGGTTTCAAGAGTATTACATCTTCAGCCGTACCCTGGAGATCGGCGGGACCAAGACGGCGGTTTATCTGACGGT TCTCGGCGTTGTCGCCGCGTCGGTGGTCTTCGTATTCATCAATCCGGAGCCTCAGTACACGGTGCTTCGCAACATCAGCG TGATTGAGAATGCCACGTGGGTCTTCCTCTCCCTGGTCAATCTCGATATGGTCCGAAAGATCTATGCCCAGATCCGGGAC TCGGTCATTGCCAAGGGATTCATCGGTTTTGGCATTGTCTTTATCGCCATCTTCCTCTGGAAGGGGGCTGAGCTCTATCT CCAGGTCTATAACTGGGATGCGGACTGGAAGCTCATCATGCAGAACCTTGGGGGCGTCGTGCCTGATCTGTATTCGGGGC GTCGCGACTTCTCGCTCTTGGTCCACGACTATGCCGGTCTCCTTTCCGGGGTCTCGGTGGGGGGGACATTCATTTACCTG TTGAAGTTGTTGCGTTAA
Upstream 100 bases:
>100_bases CATGTCCAAGACTAAGGAGATGCTGGACACCATGAAGGAAGAGATTGCCCGGCGGATTTAACAGGCTGTAGATGATTTTT TCCGAGTAGTTGGGGGGACA
Downstream 100 bases:
>100_bases CGCAGCACGTGGATCTATTTTCCGAGAAAAGGGCTGCGAGGCCCTTTTCTTGTTTGCGGGACAGTGAGCACTGTTCCGTC GATGCTCGGGGGCTACGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MADITTVDLVQITFWFLAGCISFYFSIGNARVWTSISLGFFLIFLSQLYVVEKALDMPWTAYTQLEAIHYIIGTISIMVM THGFQEYYIFSRTLEIGGTKTAVYLTVLGVVAASVVFVFINPEPQYTVLRNISVIENATWVFLSLVNLDMVRKIYAQIRD SVIAKGFIGFGIVFIAIFLWKGAELYLQVYNWDADWKLIMQNLGGVVPDLYSGRRDFSLLVHDYAGLLSGVSVGGTFIYL LKLLR
Sequences:
>Translated_245_residues MADITTVDLVQITFWFLAGCISFYFSIGNARVWTSISLGFFLIFLSQLYVVEKALDMPWTAYTQLEAIHYIIGTISIMVM THGFQEYYIFSRTLEIGGTKTAVYLTVLGVVAASVVFVFINPEPQYTVLRNISVIENATWVFLSLVNLDMVRKIYAQIRD SVIAKGFIGFGIVFIAIFLWKGAELYLQVYNWDADWKLIMQNLGGVVPDLYSGRRDFSLLVHDYAGLLSGVSVGGTFIYL LKLLR >Mature_244_residues ADITTVDLVQITFWFLAGCISFYFSIGNARVWTSISLGFFLIFLSQLYVVEKALDMPWTAYTQLEAIHYIIGTISIMVMT HGFQEYYIFSRTLEIGGTKTAVYLTVLGVVAASVVFVFINPEPQYTVLRNISVIENATWVFLSLVNLDMVRKIYAQIRDS VIAKGFIGFGIVFIAIFLWKGAELYLQVYNWDADWKLIMQNLGGVVPDLYSGRRDFSLLVHDYAGLLSGVSVGGTFIYLL KLLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27703; Mature: 27572
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADITTVDLVQITFWFLAGCISFYFSIGNARVWTSISLGFFLIFLSQLYVVEKALDMPWT CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCH AYTQLEAIHYIIGTISIMVMTHGFQEYYIFSRTLEIGGTKTAVYLTVLGVVAASVVFVFI HHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHEEEEE NPEPQYTVLRNISVIENATWVFLSLVNLDMVRKIYAQIRDSVIAKGFIGFGIVFIAIFLW CCCCCEEHHHCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGAELYLQVYNWDADWKLIMQNLGGVVPDLYSGRRDFSLLVHDYAGLLSGVSVGGTFIYL CCCEEEEEEECCCCHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHH LKLLR HHHHC >Mature Secondary Structure ADITTVDLVQITFWFLAGCISFYFSIGNARVWTSISLGFFLIFLSQLYVVEKALDMPWT CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCH AYTQLEAIHYIIGTISIMVMTHGFQEYYIFSRTLEIGGTKTAVYLTVLGVVAASVVFVFI HHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHEEEEE NPEPQYTVLRNISVIENATWVFLSLVNLDMVRKIYAQIRDSVIAKGFIGFGIVFIAIFLW CCCCCEEHHHCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGAELYLQVYNWDADWKLIMQNLGGVVPDLYSGRRDFSLLVHDYAGLLSGVSVGGTFIYL CCCEEEEEEECCCCHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHH LKLLR HHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA