Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222484
Identifier: 78222484
GI number: 78222484
Start: 1430844
End: 1432361
Strand: Direct
Name: 78222484
Synonym: Gmet_1270
Alternate gene names: NA
Gene position: 1430844-1432361 (Clockwise)
Preceding gene: 78222483
Following gene: 78222485
Centisome position: 35.79
GC content: 56.13
Gene sequence:
>1518_bases ATGCGTCTTCGCATCCTGTTTATCCTCTGTGTTCTCGCGATGTTCCTGGCTGCGCCCCTTGAAGCGTCGGCAGGGGATGA GGCGGAGCAGGGAACGATAGTGACCCTCTGGCCGTTCTTCGACTATCGGGAGAGTCCCGGCAACGGCTTCAGTAATCTTT CGATCCTGGGTCCCCTGATCAAGGTCCAGCAGCAGGGGGGAGAAAGGACAACTGCGGTCCGTCCCTTTGTCTACCGCACC GTCGATGAACGGGAGCATAGCGCAACAACGAGCTATCTCTATCCGCTCGCCTCGTCGCGGGAAGCTCCGGAAGTGTCGAC CTTTCAGGTGTTGCAGCTCTTACAGGTTAATACGTTCCGCAAGGATGAGCCGGACAAGGTGAAGAGCGATTCCATGCTCT TTCCGTTCTATATTCGCGGCAAATCGGAAACCTATGGACCGTATACCTCGGTATTTCCGTTTTACGGAACGCTTTATGAG CGATTCTGGCGGGACGAGATCCACTTCACCCTCTTCCCGCTTTACAGTCGCACGGTCAAGAAGGATACCACGACGCGAAA CTACCTCTATCCGTTTTTCTCGACCACCTCAGGGGTGGGGGAGAACGGCTTCCAATTTTGGCCCCTATACGGCAGCGCCG CCAAGGAAGGGAGCTACGAACGTCGCTTCATCCTCTGGCCCTTCTACTTCCATGAGCGGAAGGGGCTCGACACGGACAAC CCAACGGAGCGGCTCACCGTTTTCCCTCTTTATTCGGCTACCGAATCCCCCCGGCTCTCTTCCCGTACCTATCTCTGGCC TTTTATGGGTTGGACCAGCGACCGGGAGGCGAAGCAGGAGGAGCGACGCTACCTTTGGCCCCTGATCATGACCGCCACGG GCGAAAAGCGAGACGTAAAGCGCTATCTTCCCTTCTATGCCGAGGAACGGAGCAAGGAAACCCTCAAACGGTGGTATCTC TGGCCCCTCTATCGGCACGACGAGCTTGCGTCGGACACCTATTGCCGTGATCGCGACCGTATTCTTTTTTTCCTGTATTC GGACTTGCGGGAGCAATGGCCCGTTGACCACGCAGAACGGCGACGGACAACATTCTGGCCTCTCTTTGTCTTCACTCGGG GCACTCATGGAGTGAAGCAGTTCAGCTTTCCGGCACTTATGGAGCCCATTTTGCCTCAGGAAGGGATCGAGCAGAGTTGG GCTCCCCTCTGGCGGGTCTATATCCAGCGATGGAGCGATTCCGGTGATTCCACTGTATCGTTTCTCTGGAACCTTTACTG GCACGAGCGGAGGGGAAATGATCTGGCTTATGAATTGTTTCCGTTAGTTTCATACCGCTCGGAAGGCACACGGGCCGACG TTTCCGTGCTGAAGGGACTCATTCGGTTACGACAAAATAAAGGGGTGAAGACCCTGAGCCTTTTCTGGCTTCCCTTCGGC ATAACCTGGGATGCGAGTGGAGAGGCTGCGGCTGGACAGGAGAGCACTATGACGAACAGTGCGAGGCTTGAACCGTGA
Upstream 100 bases:
>100_bases TATGAACGGGCGCTAGAGGGGATTTTTTGTTGACTCACCCCGGTTCATGAGGGTATGTAAGCAGTCTGTACATTTTTTTG ACACGGTGGAATTACCCTCC
Downstream 100 bases:
>100_bases CAGGCATGTTCGAGCGCGTAGGGAAACGGGTGATTGCGTTTAACGAAATCGTGGGAGAGATGGTCATGCTCCTCTGCCAG ACCGTCTGGTTTTTTCGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 505; Mature: 505
Protein sequence:
>505_residues MRLRILFILCVLAMFLAAPLEASAGDEAEQGTIVTLWPFFDYRESPGNGFSNLSILGPLIKVQQQGGERTTAVRPFVYRT VDEREHSATTSYLYPLASSREAPEVSTFQVLQLLQVNTFRKDEPDKVKSDSMLFPFYIRGKSETYGPYTSVFPFYGTLYE RFWRDEIHFTLFPLYSRTVKKDTTTRNYLYPFFSTTSGVGENGFQFWPLYGSAAKEGSYERRFILWPFYFHERKGLDTDN PTERLTVFPLYSATESPRLSSRTYLWPFMGWTSDREAKQEERRYLWPLIMTATGEKRDVKRYLPFYAEERSKETLKRWYL WPLYRHDELASDTYCRDRDRILFFLYSDLREQWPVDHAERRRTTFWPLFVFTRGTHGVKQFSFPALMEPILPQEGIEQSW APLWRVYIQRWSDSGDSTVSFLWNLYWHERRGNDLAYELFPLVSYRSEGTRADVSVLKGLIRLRQNKGVKTLSLFWLPFG ITWDASGEAAAGQESTMTNSARLEP
Sequences:
>Translated_505_residues MRLRILFILCVLAMFLAAPLEASAGDEAEQGTIVTLWPFFDYRESPGNGFSNLSILGPLIKVQQQGGERTTAVRPFVYRT VDEREHSATTSYLYPLASSREAPEVSTFQVLQLLQVNTFRKDEPDKVKSDSMLFPFYIRGKSETYGPYTSVFPFYGTLYE RFWRDEIHFTLFPLYSRTVKKDTTTRNYLYPFFSTTSGVGENGFQFWPLYGSAAKEGSYERRFILWPFYFHERKGLDTDN PTERLTVFPLYSATESPRLSSRTYLWPFMGWTSDREAKQEERRYLWPLIMTATGEKRDVKRYLPFYAEERSKETLKRWYL WPLYRHDELASDTYCRDRDRILFFLYSDLREQWPVDHAERRRTTFWPLFVFTRGTHGVKQFSFPALMEPILPQEGIEQSW APLWRVYIQRWSDSGDSTVSFLWNLYWHERRGNDLAYELFPLVSYRSEGTRADVSVLKGLIRLRQNKGVKTLSLFWLPFG ITWDASGEAAAGQESTMTNSARLEP >Mature_505_residues MRLRILFILCVLAMFLAAPLEASAGDEAEQGTIVTLWPFFDYRESPGNGFSNLSILGPLIKVQQQGGERTTAVRPFVYRT VDEREHSATTSYLYPLASSREAPEVSTFQVLQLLQVNTFRKDEPDKVKSDSMLFPFYIRGKSETYGPYTSVFPFYGTLYE RFWRDEIHFTLFPLYSRTVKKDTTTRNYLYPFFSTTSGVGENGFQFWPLYGSAAKEGSYERRFILWPFYFHERKGLDTDN PTERLTVFPLYSATESPRLSSRTYLWPFMGWTSDREAKQEERRYLWPLIMTATGEKRDVKRYLPFYAEERSKETLKRWYL WPLYRHDELASDTYCRDRDRILFFLYSDLREQWPVDHAERRRTTFWPLFVFTRGTHGVKQFSFPALMEPILPQEGIEQSW APLWRVYIQRWSDSGDSTVSFLWNLYWHERRGNDLAYELFPLVSYRSEGTRADVSVLKGLIRLRQNKGVKTLSLFWLPFG ITWDASGEAAAGQESTMTNSARLEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59400; Mature: 59400
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRILFILCVLAMFLAAPLEASAGDEAEQGTIVTLWPFFDYRESPGNGFSNLSILGPLI CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHH KVQQQGGERTTAVRPFVYRTVDEREHSATTSYLYPLASSREAPEVSTFQVLQLLQVNTFR HHHHCCCCCCEEECCHHEECHHHHHHCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHCCC KDEPDKVKSDSMLFPFYIRGKSETYGPYTSVFPFYGTLYERFWRDEIHFTLFPLYSRTVK CCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHH KDTTTRNYLYPFFSTTSGVGENGFQFWPLYGSAAKEGSYERRFILWPFYFHERKGLDTDN CCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCC PTERLTVFPLYSATESPRLSSRTYLWPFMGWTSDREAKQEERRYLWPLIMTATGEKRDVK CCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHEECEEEEECCCCHHHHH RYLPFYAEERSKETLKRWYLWPLYRHDELASDTYCRDRDRILFFLYSDLREQWPVDHAER HHCCHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCEEEEEEHHHHHHCCCCHHHC RRTTFWPLFVFTRGTHGVKQFSFPALMEPILPQEGIEQSWAPLWRVYIQRWSDSGDSTVS CCCEEEEEEEEECCCCCCHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHH FLWNLYWHERRGNDLAYELFPLVSYRSEGTRADVSVLKGLIRLRQNKGVKTLSLFWLPFG HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEE ITWDASGEAAAGQESTMTNSARLEP EEECCCCCCCCCCCHHCCCCCCCCC >Mature Secondary Structure MRLRILFILCVLAMFLAAPLEASAGDEAEQGTIVTLWPFFDYRESPGNGFSNLSILGPLI CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHH KVQQQGGERTTAVRPFVYRTVDEREHSATTSYLYPLASSREAPEVSTFQVLQLLQVNTFR HHHHCCCCCCEEECCHHEECHHHHHHCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHCCC KDEPDKVKSDSMLFPFYIRGKSETYGPYTSVFPFYGTLYERFWRDEIHFTLFPLYSRTVK CCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHH KDTTTRNYLYPFFSTTSGVGENGFQFWPLYGSAAKEGSYERRFILWPFYFHERKGLDTDN CCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCC PTERLTVFPLYSATESPRLSSRTYLWPFMGWTSDREAKQEERRYLWPLIMTATGEKRDVK CCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHEECEEEEECCCCHHHHH RYLPFYAEERSKETLKRWYLWPLYRHDELASDTYCRDRDRILFFLYSDLREQWPVDHAER HHCCHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCEEEEEEHHHHHHCCCCHHHC RRTTFWPLFVFTRGTHGVKQFSFPALMEPILPQEGIEQSWAPLWRVYIQRWSDSGDSTVS CCCEEEEEEEEECCCCCCHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHH FLWNLYWHERRGNDLAYELFPLVSYRSEGTRADVSVLKGLIRLRQNKGVKTLSLFWLPFG HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEE ITWDASGEAAAGQESTMTNSARLEP EEECCCCCCCCCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA