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The map label for this gene is yrbE [C]

Identifier: 78222485

GI number: 78222485

Start: 1432367

End: 1433134

Strand: Direct

Name: yrbE [C]

Synonym: Gmet_1271

Alternate gene names: 78222485

Gene position: 1432367-1433134 (Clockwise)

Preceding gene: 78222484

Following gene: 78222486

Centisome position: 35.83

GC content: 56.9

Gene sequence:

>768_bases
ATGTTCGAGCGCGTAGGGAAACGGGTGATTGCGTTTAACGAAATCGTGGGAGAGATGGTCATGCTCCTCTGCCAGACCGT
CTGGTTTTTTCGTGAGGCGCCGCGCAACATCCTGAGCATCTTTACCCAGATGTCGATCATCGGTTACGAAACGCTGCCGA
TGGCTTCAGTCATGGCATTCTTCGTGGGGATGGTCCTGGCGCTCCAGACCGGGGCCGAGCTTCAGAAGTATGGTACCCAG
AACATCATCGGCGGCATTGTGGGGCTCTCCATGGTTCGGGAACTGGGGCCGGTCATGACGAGCTTTTTGGTGGCCGGGCG
GGCCGGATCAGCCATGGCGGCCGAGATCGGGGTCATGAAGGTCTATGAGGAAATCGACGCCCTCAAGACCCTCGATATCA
ACCCCGTGCGCTACCTTGCCATGCCACGGCTTATCGCCTGTCTCATCTGTGTTCCGGCGCTGGTCATCTACGCCGATTTC
GTGGGGATTCTGGGGGGGGCGCTCCTGAGTCACCTGCATCCGAAGATTTTTATTTCCTATTCAACCTATTACGACAGCCT
CAATACGGCGCTCAAATTGAAGGAGATCGGTGCCGGGCTTCTCAAGGCCACGGTGTTTGGCTGTATCATCGGGGTGGTGT
CGTGTTACACCGGTTTCAAGACTACCGGAGGGGCCCGGGGAATCGCCCAGTCCACCACCAGGGCTGTGGTCCTCTCATTT
ATGCTGATTCTGGCGGCTGATTATTTTCTGACGAGGCTTCTGCTCTGA

Upstream 100 bases:

>100_bases
TCTGGCTTCCCTTCGGCATAACCTGGGATGCGAGTGGAGAGGCTGCGGCTGGACAGGAGAGCACTATGACGAACAGTGCG
AGGCTTGAACCGTGACAGGC

Downstream 100 bases:

>100_bases
ACAGTCGATTTCAATCGGGGAATTTCATGGTTTGCGAAAATGGTGTGCAATGCGGCCGCCCAGGCCGGTGCGGAGGGGGC
GCGAGGTATTATGTCTATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MFERVGKRVIAFNEIVGEMVMLLCQTVWFFREAPRNILSIFTQMSIIGYETLPMASVMAFFVGMVLALQTGAELQKYGTQ
NIIGGIVGLSMVRELGPVMTSFLVAGRAGSAMAAEIGVMKVYEEIDALKTLDINPVRYLAMPRLIACLICVPALVIYADF
VGILGGALLSHLHPKIFISYSTYYDSLNTALKLKEIGAGLLKATVFGCIIGVVSCYTGFKTTGGARGIAQSTTRAVVLSF
MLILAADYFLTRLLL

Sequences:

>Translated_255_residues
MFERVGKRVIAFNEIVGEMVMLLCQTVWFFREAPRNILSIFTQMSIIGYETLPMASVMAFFVGMVLALQTGAELQKYGTQ
NIIGGIVGLSMVRELGPVMTSFLVAGRAGSAMAAEIGVMKVYEEIDALKTLDINPVRYLAMPRLIACLICVPALVIYADF
VGILGGALLSHLHPKIFISYSTYYDSLNTALKLKEIGAGLLKATVFGCIIGVVSCYTGFKTTGGARGIAQSTTRAVVLSF
MLILAADYFLTRLLL
>Mature_255_residues
MFERVGKRVIAFNEIVGEMVMLLCQTVWFFREAPRNILSIFTQMSIIGYETLPMASVMAFFVGMVLALQTGAELQKYGTQ
NIIGGIVGLSMVRELGPVMTSFLVAGRAGSAMAAEIGVMKVYEEIDALKTLDINPVRYLAMPRLIACLICVPALVIYADF
VGILGGALLSHLHPKIFISYSTYYDSLNTALKLKEIGAGLLKATVFGCIIGVVSCYTGFKTTGGARGIAQSTTRAVVLSF
MLILAADYFLTRLLL

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=254, Percent_Identity=31.8897637795276, Blast_Score=122, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 27679; Mature: 27679

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHC
>Mature Secondary Structure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HHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA