Click here to switch to the map view.

The map label for this gene is 78188425

Identifier: 78188425

GI number: 78188425

Start: 524280

End: 525518

Strand: Reverse

Name: 78188425

Synonym: Cag_0447

Alternate gene names: NA

Gene position: 525518-524280 (Counterclockwise)

Preceding gene: 78188426

Following gene: 78188420

Centisome position: 20.43

GC content: 49.15

Gene sequence:

>1239_bases
ATGCGCTACCTTTTTGTTCACCAAAATTTTCCCGGGCAGTTCAAATTTCTTGCCCCAACATTAGCCGCTAATAAGAGCAA
CAAAGTGGTAGCGCTTTGCATGAAGCCGCAAGCGCCTACCATATGGCAAGGCGTTGAGGTTCGTAGCTATAGCGCCAATC
GAGGCACAACAAAAGGGGTGCATCCGTGGGTGAGCGATTTTGAAACCAAAACCATTCGGGCGGAAGCCTGCTTTATGGCA
GCGCAACAGCTTAAAGCTGAAGGCTTTACGCCCGACGTTATTATTGCGCATCCCGGCTGGGGCGAAAGCATGTTTTTAAA
AGAGGTATGGCCTCATGCAAAGCTTGGCATCTATTGCGAATTTTACTACCACCCCGAAGGTGCTGATGTTGGCTTTGATC
CTGAATTTCCACCGAAAAGTGAGAGCGACCGTTGCCGCTTGCGGTTAAAAAACCTCAACAACATTGTACACTTTCAAATT
GCCGATGCGGGACTTTCACCAACTCATTGGCAGGCAAGTACTTTTCCCGAACCATTTCGCTCCCGCATTACCGTTGCCCA
CGATGGCATTGATACCACGCTGCTCTCTTCAAACGTAGCAGTGCGCTTAACGCTCAATAATAGCCTGACACTCACTCGTA
AGGATGAAGTTATCACCTTTGTAAATCGCAACTTAGAGCCATATCGAGGCTACCACGTTTTTATGCGAGCACTGCCCGAA
CTGCTGCAACAGCGCCCAAATGCACGGGTGCTTCTTGTGGGGGGCGACAAGGTCAGTTACGGCGCTAAGCCTGAGGGAGA
AGAAAGCTGGAAGGAGCACTTTATTGCCGAAGTGCGTCCACGCATCAGCGATGCCGATTGGGCACGAGTTCACTTTCTTG
GAACTATTCCCTACAACATTTTTGTTCAGTTGCTCCAACTCTCCACCGTACACATTTATCTCACCTATCCCTTTGTGCTT
TCATGGAGTTTGCTTGAAGCCATGAGCATTGGGTGCGCCATTGTTGCCAGCAACACCAAGCCGCTGCTTGAAGCCATTCA
CCACAATGAAACAGGGCAACTTGTTGATTTTTTTGATGAAAAAGGATTGGTTGAGAACATTTGCGAGTTGCTTGATAACA
CCAATGAACGCGCACGGCTTGGCGCTAATGCCCGACGCTTTGCGCAAGCCACCTACGACTTACGCACCATCTGTTTACCG
CAACAGCTTGCATGGGTTGAGAGCTTGAGCAAAAAATAG

Upstream 100 bases:

>100_bases
GCCGCATTTTCTCTCTCCCTATGCACCCATATTTGAAGGATGAGGAGATTGAGCAAATTTGCACCGTTCTTTTGCAAACA
AAGTAAGCTGATAAGAGAAG

Downstream 100 bases:

>100_bases
GAGAGTTTGAAGACTCTCCTAAAAACAAAGCGGTTGAGAGCATTCAGCAATGTTGTGTTGCGCTCCACATACCCCACACA
AGCATTAGTGTTGGTGATAC

Product: hypothetical protein

Products: NA

Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase Family Protein; Glycosyl Transferase; Glycosyl Transferase Group 1 Protein

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MRYLFVHQNFPGQFKFLAPTLAANKSNKVVALCMKPQAPTIWQGVEVRSYSANRGTTKGVHPWVSDFETKTIRAEACFMA
AQQLKAEGFTPDVIIAHPGWGESMFLKEVWPHAKLGIYCEFYYHPEGADVGFDPEFPPKSESDRCRLRLKNLNNIVHFQI
ADAGLSPTHWQASTFPEPFRSRITVAHDGIDTTLLSSNVAVRLTLNNSLTLTRKDEVITFVNRNLEPYRGYHVFMRALPE
LLQQRPNARVLLVGGDKVSYGAKPEGEESWKEHFIAEVRPRISDADWARVHFLGTIPYNIFVQLLQLSTVHIYLTYPFVL
SWSLLEAMSIGCAIVASNTKPLLEAIHHNETGQLVDFFDEKGLVENICELLDNTNERARLGANARRFAQATYDLRTICLP
QQLAWVESLSKK

Sequences:

>Translated_412_residues
MRYLFVHQNFPGQFKFLAPTLAANKSNKVVALCMKPQAPTIWQGVEVRSYSANRGTTKGVHPWVSDFETKTIRAEACFMA
AQQLKAEGFTPDVIIAHPGWGESMFLKEVWPHAKLGIYCEFYYHPEGADVGFDPEFPPKSESDRCRLRLKNLNNIVHFQI
ADAGLSPTHWQASTFPEPFRSRITVAHDGIDTTLLSSNVAVRLTLNNSLTLTRKDEVITFVNRNLEPYRGYHVFMRALPE
LLQQRPNARVLLVGGDKVSYGAKPEGEESWKEHFIAEVRPRISDADWARVHFLGTIPYNIFVQLLQLSTVHIYLTYPFVL
SWSLLEAMSIGCAIVASNTKPLLEAIHHNETGQLVDFFDEKGLVENICELLDNTNERARLGANARRFAQATYDLRTICLP
QQLAWVESLSKK
>Mature_412_residues
MRYLFVHQNFPGQFKFLAPTLAANKSNKVVALCMKPQAPTIWQGVEVRSYSANRGTTKGVHPWVSDFETKTIRAEACFMA
AQQLKAEGFTPDVIIAHPGWGESMFLKEVWPHAKLGIYCEFYYHPEGADVGFDPEFPPKSESDRCRLRLKNLNNIVHFQI
ADAGLSPTHWQASTFPEPFRSRITVAHDGIDTTLLSSNVAVRLTLNNSLTLTRKDEVITFVNRNLEPYRGYHVFMRALPE
LLQQRPNARVLLVGGDKVSYGAKPEGEESWKEHFIAEVRPRISDADWARVHFLGTIPYNIFVQLLQLSTVHIYLTYPFVL
SWSLLEAMSIGCAIVASNTKPLLEAIHHNETGQLVDFFDEKGLVENICELLDNTNERARLGANARRFAQATYDLRTICLP
QQLAWVESLSKK

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46704; Mature: 46704

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYLFVHQNFPGQFKFLAPTLAANKSNKVVALCMKPQAPTIWQGVEVRSYSANRGTTKGV
CEEEEEECCCCCCEEEECCEECCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCC
HPWVSDFETKTIRAEACFMAAQQLKAEGFTPDVIIAHPGWGESMFLKEVWPHAKLGIYCE
CHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHCCCCCEEEEEE
FYYHPEGADVGFDPEFPPKSESDRCRLRLKNLNNIVHFQIADAGLSPTHWQASTFPEPFR
EEECCCCCCCCCCCCCCCCCCCCHHHEEECCCCCEEEEEEECCCCCCCCCCCCCCCCHHH
SRITVAHDGIDTTLLSSNVAVRLTLNNSLTLTRKDEVITFVNRNLEPYRGYHVFMRALPE
CCEEEEECCCCEEEECCCEEEEEEECCCEEEEECCCEEEEECCCCCCCCHHHHHHHHHHH
LLQQRPNARVLLVGGDKVSYGAKPEGEESWKEHFIAEVRPRISDADWARVHFLGTIPYNI
HHHHCCCCEEEEECCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCHHH
FVQLLQLSTVHIYLTYPFVLSWSLLEAMSIGCAIVASNTKPLLEAIHHNETGQLVDFFDE
HHHHHHHCEEEEEEEEHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHCCCCCCHHHHHCC
KGLVENICELLDNTNERARLGANARRFAQATYDLRTICLPQQLAWVESLSKK
CCHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHEEECHHHHHHHHHHHCC
>Mature Secondary Structure
MRYLFVHQNFPGQFKFLAPTLAANKSNKVVALCMKPQAPTIWQGVEVRSYSANRGTTKGV
CEEEEEECCCCCCEEEECCEECCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCC
HPWVSDFETKTIRAEACFMAAQQLKAEGFTPDVIIAHPGWGESMFLKEVWPHAKLGIYCE
CHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHCCCCCEEEEEE
FYYHPEGADVGFDPEFPPKSESDRCRLRLKNLNNIVHFQIADAGLSPTHWQASTFPEPFR
EEECCCCCCCCCCCCCCCCCCCCHHHEEECCCCCEEEEEEECCCCCCCCCCCCCCCCHHH
SRITVAHDGIDTTLLSSNVAVRLTLNNSLTLTRKDEVITFVNRNLEPYRGYHVFMRALPE
CCEEEEECCCCEEEECCCEEEEEEECCCEEEEECCCEEEEECCCCCCCCHHHHHHHHHHH
LLQQRPNARVLLVGGDKVSYGAKPEGEESWKEHFIAEVRPRISDADWARVHFLGTIPYNI
HHHHCCCCEEEEECCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCHHH
FVQLLQLSTVHIYLTYPFVLSWSLLEAMSIGCAIVASNTKPLLEAIHHNETGQLVDFFDE
HHHHHHHCEEEEEEEEHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHCCCCCCHHHHHCC
KGLVENICELLDNTNERARLGANARRFAQATYDLRTICLPQQLAWVESLSKK
CCHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHEEECHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA