Click here to switch to the map view.

The map label for this gene is 78188419

Identifier: 78188419

GI number: 78188419

Start: 516708

End: 517238

Strand: Reverse

Name: 78188419

Synonym: Cag_0441

Alternate gene names: NA

Gene position: 517238-516708 (Counterclockwise)

Preceding gene: 78188420

Following gene: 78188418

Centisome position: 20.11

GC content: 45.76

Gene sequence:

>531_bases
ATGAGTGCTTCTTTAAAATCGTGGGCAACGCCTTTAGCCGTTGGGACTTTTGCCATTATTGCCGTAACGGGCATCTTGCT
TTTTTTTGATATTGAAATTGGCTTTGTGGAGCCTGTACACAAATGGGCAAGCTGGGCGTTTGTTGCAGGCGTATTGCTTC
ATGTAGTATCAAACAGGAAAGCCTTGACCCATTATTTTTCCAGCAAACCTGCGCTTGCTATTATTGGCACCGCAATGGTT
GTGCTGGTAGCAACGCTTTTGCCATTTGGTGAAAAAGAGGAGCACGAAAATCCTGCAAAAATGGCAGCCTATGCGCTGAG
CAGCTCATCGCTTGAAACCGTTGCTCTTGTGGTAAAAAGCACGCCCGATGTGTTGAGTACGCAACTTGCAGCCAAAGGGC
TTGTGGTTTCCTCACCTACCGCTACTATTGAGCAAATAGCGAAGAGCAATGGTAAAGAGCCAAAAGAGGTTTTAGCCAAT
ATTCTCTCCCTTTCAAAAGGTAAAGCGGAACATGATGGTGATGACGACTAA

Upstream 100 bases:

>100_bases
GTTTTAATGAAGATTTAAGTTTGGCTTTACTCTTGTTTAAAGAAAAGAGAACTACCTTAACTTTCGTTGAACTGCCAATC
TTTAAACAAAACAAATTACT

Downstream 100 bases:

>100_bases
TCATTGTTGATAGTTCGCACGCTCGCACCACTTTTTGCATAATGAAAAGAGTGGTGCAACTGCGCTTCTCCTACTTCCAT
CAAAAATCCATCATTAACCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MSASLKSWATPLAVGTFAIIAVTGILLFFDIEIGFVEPVHKWASWAFVAGVLLHVVSNRKALTHYFSSKPALAIIGTAMV
VLVATLLPFGEKEEHENPAKMAAYALSSSSLETVALVVKSTPDVLSTQLAAKGLVVSSPTATIEQIAKSNGKEPKEVLAN
ILSLSKGKAEHDGDDD

Sequences:

>Translated_176_residues
MSASLKSWATPLAVGTFAIIAVTGILLFFDIEIGFVEPVHKWASWAFVAGVLLHVVSNRKALTHYFSSKPALAIIGTAMV
VLVATLLPFGEKEEHENPAKMAAYALSSSSLETVALVVKSTPDVLSTQLAAKGLVVSSPTATIEQIAKSNGKEPKEVLAN
ILSLSKGKAEHDGDDD
>Mature_175_residues
SASLKSWATPLAVGTFAIIAVTGILLFFDIEIGFVEPVHKWASWAFVAGVLLHVVSNRKALTHYFSSKPALAIIGTAMVV
LVATLLPFGEKEEHENPAKMAAYALSSSSLETVALVVKSTPDVLSTQLAAKGLVVSSPTATIEQIAKSNGKEPKEVLANI
LSLSKGKAEHDGDDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18571; Mature: 18439

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASLKSWATPLAVGTFAIIAVTGILLFFDIEIGFVEPVHKWASWAFVAGVLLHVVSNRK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCH
ALTHYFSSKPALAIIGTAMVVLVATLLPFGEKEEHENPAKMAAYALSSSSLETVALVVKS
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHC
TPDVLSTQLAAKGLVVSSPTATIEQIAKSNGKEPKEVLANILSLSKGKAEHDGDDD
CCHHHHHHHHHCCCEEECCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SASLKSWATPLAVGTFAIIAVTGILLFFDIEIGFVEPVHKWASWAFVAGVLLHVVSNRK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCH
ALTHYFSSKPALAIIGTAMVVLVATLLPFGEKEEHENPAKMAAYALSSSSLETVALVVKS
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHC
TPDVLSTQLAAKGLVVSSPTATIEQIAKSNGKEPKEVLANILSLSKGKAEHDGDDD
CCHHHHHHHHHCCCEEECCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA