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The map label for this gene is accB [H]

Identifier: 78188338

GI number: 78188338

Start: 413017

End: 413490

Strand: Reverse

Name: accB [H]

Synonym: Cag_0360

Alternate gene names: 78188338

Gene position: 413490-413017 (Counterclockwise)

Preceding gene: 78188339

Following gene: 78188337

Centisome position: 16.08

GC content: 45.36

Gene sequence:

>474_bases
ATGAACCTCAGCGACATTAAAGAGCTTATTGACGTAGTCAATAACTCCGATCTTCAAGAAGCTATTATTGAAGAGGGTAA
TTTTAAATTGATTCTTCGCCGACCTGCTCCCGTTGTGGTGCAGCAAGCAGCTCCTGCGGCAATTGCCCCAACTGCCATGC
CTGCTCCAACCTATGCAGCCCCCGCACCGCAAGCAACGGCACCAGCCGCCAAACCAGCCCCAACGATTGACACTTCGTTA
ATTGAATGCCGTTCACCAATTGTTGGCACTTTTTATCATGCCTCATCCCCCGATACACCACCATTTGTAAGTATTAACGA
TACCATTAAAAAAGGTGATGTGCTTTGCATTATTGAGGCAATGAAGCTGATGAATGAAATTGAAGCTGAAGTTTCTGGCA
CCATTGTTGAAATCCTTGTGGAAAATGGACAAGCGGTTGAATACGATCAGCCATTGTTCCGCATTAAACCATAA

Upstream 100 bases:

>100_bases
CACTCGCACTGGTGAGTATATTGAACGAGTAAAAAAGTAAACCCTTGTTTCGCTGCACTATCTTAGCCTGATGCTGTTTT
AAACTTAAGCTTACAATACC

Downstream 100 bases:

>100_bases
TTTTACTTTTTACAGCCTTGTTCAAAAAAATACTTGTTGCTAATCGTGGCGAAATTGCATTGCGTGTTATGCAAACCTGC
CGCGAAATGGGAATCAGCAC

Product: Acetyl-CoA biotin carboxyl carrier

Products: Malonyl-CoA; malonyl-CoA; phosphate; ADP [C]

Alternate protein names: BCCP [H]

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MNLSDIKELIDVVNNSDLQEAIIEEGNFKLILRRPAPVVVQQAAPAAIAPTAMPAPTYAAPAPQATAPAAKPAPTIDTSL
IECRSPIVGTFYHASSPDTPPFVSINDTIKKGDVLCIIEAMKLMNEIEAEVSGTIVEILVENGQAVEYDQPLFRIKP

Sequences:

>Translated_157_residues
MNLSDIKELIDVVNNSDLQEAIIEEGNFKLILRRPAPVVVQQAAPAAIAPTAMPAPTYAAPAPQATAPAAKPAPTIDTSL
IECRSPIVGTFYHASSPDTPPFVSINDTIKKGDVLCIIEAMKLMNEIEAEVSGTIVEILVENGQAVEYDQPLFRIKP
>Mature_157_residues
MNLSDIKELIDVVNNSDLQEAIIEEGNFKLILRRPAPVVVQQAAPAAIAPTAMPAPTYAAPAPQATAPAAKPAPTIDTSL
IECRSPIVGTFYHASSPDTPPFVSINDTIKKGDVLCIIEAMKLMNEIEAEVSGTIVEILVENGQAVEYDQPLFRIKP

Specific function: This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA [H]

COG id: COG0511

COG function: function code I; Biotin carboxyl carrier protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 biotinyl-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789653, Length=160, Percent_Identity=41.875, Blast_Score=115, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001249
- InterPro:   IPR001882
- InterPro:   IPR000089
- InterPro:   IPR011053 [H]

Pfam domain/function: PF00364 Biotin_lipoyl [H]

EC number: NA

Molecular weight: Translated: 16805; Mature: 16805

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: PS50937 HTH_MERR_2 ; PS50968 BIOTINYL_LIPOYL ; PS00188 BIOTIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSDIKELIDVVNNSDLQEAIIEEGNFKLILRRPAPVVVQQAAPAAIAPTAMPAPTYAA
CCHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEECCCCEEEECCCCCEECCCCCCCCCCCC
PAPQATAPAAKPAPTIDTSLIECRSPIVGTFYHASSPDTPPFVSINDTIKKGDVLCIIEA
CCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCCEEHHHHH
MKLMNEIEAEVSGTIVEILVENGQAVEYDQPLFRIKP
HHHHHHHHHHHCCCEEEEEECCCCEEECCCCEEEECC
>Mature Secondary Structure
MNLSDIKELIDVVNNSDLQEAIIEEGNFKLILRRPAPVVVQQAAPAAIAPTAMPAPTYAA
CCHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEECCCCEEEECCCCCEECCCCCCCCCCCC
PAPQATAPAAKPAPTIDTSLIECRSPIVGTFYHASSPDTPPFVSINDTIKKGDVLCIIEA
CCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCCEEHHHHH
MKLMNEIEAEVSGTIVEILVENGQAVEYDQPLFRIKP
HHHHHHHHHHHCCCEEEEEECCCCEEECCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acetyl-CoA; HCO3-; Proton; acetyl-CoA; ATP [C]

Specific reaction: acetyl-CoA = malonyl-CoA HCO3- + Proton + acetyl-CoA + ATP = malonyl-CoA + phosphate + ADP [C]

General reaction: Ligases; Forming Carbon-Carbon Bonds; acetyl-CoA carboxylase Reaction [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8102363; 11759840 [H]