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The map label for this gene is efp

Identifier: 78188339

GI number: 78188339

Start: 413551

End: 414117

Strand: Reverse

Name: efp

Synonym: Cag_0361

Alternate gene names: 78188339

Gene position: 414117-413551 (Counterclockwise)

Preceding gene: 78188343

Following gene: 78188338

Centisome position: 16.1

GC content: 41.62

Gene sequence:

>567_bases
ATGCCATCTATTAGCACTGTTTCAAAAGGTTCGATTATTCGTTTTAAAGGAGAACCTCATAGCATCGAAAGCCTTATTCA
CCGTACACCTGGTAATCTTCGTGCTTTTTATCAGGCAAACATGAAAAACCTGAAAACGGGTCGCAACGTTGAGTACCGTT
TTAGCTCATCTGAAACGGTTGACGTTATTGTTACGGAGCGTAAACAGTATCAATACCTTTACCGCGATGGCAGCGATTTT
GTTATGATGGATAATAACACCTTTGAGCAAATCAATGTACCTGAAGTTGCATTGGGCGAAGGGGCTAATTTTATGAAGGA
TAACATCAACGTAACCATTGTTTTCTCCGACGATGGTTCTATTCTTCAAGTTGAACTGCCTACCTTTGTTGAAGTTGAGG
TTACCGATACCAATCCTGCCTCAAAAGATGATCGCGCTACCAGTGGCACCAAACCCGCTATTGTGGAAACTGGTGCAGAG
GTCAACGTTCCCATGTTTATTCAAATTGGTAGTGTTATTCGTGTGGACACTCGCACTGGTGAGTATATTGAACGAGTAAA
AAAGTAA

Upstream 100 bases:

>100_bases
GAGCATTGGAGCACTGCGTCCCCATACTCCCTCGCCTTGTAAGGGTAGGCAGGCAACAACCGCTTTACCAACAACCGTTT
CATTTTATTTTTGAAATCTT

Downstream 100 bases:

>100_bases
ACCCTTGTTTCGCTGCACTATCTTAGCCTGATGCTGTTTTAAACTTAAGCTTACAATACCATGAACCTCAGCGACATTAA
AGAGCTTATTGACGTAGTCA

Product: elongation factor P

Products: NA

Alternate protein names: EF-P

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MPSISTVSKGSIIRFKGEPHSIESLIHRTPGNLRAFYQANMKNLKTGRNVEYRFSSSETVDVIVTERKQYQYLYRDGSDF
VMMDNNTFEQINVPEVALGEGANFMKDNINVTIVFSDDGSILQVELPTFVEVEVTDTNPASKDDRATSGTKPAIVETGAE
VNVPMFIQIGSVIRVDTRTGEYIERVKK

Sequences:

>Translated_188_residues
MPSISTVSKGSIIRFKGEPHSIESLIHRTPGNLRAFYQANMKNLKTGRNVEYRFSSSETVDVIVTERKQYQYLYRDGSDF
VMMDNNTFEQINVPEVALGEGANFMKDNINVTIVFSDDGSILQVELPTFVEVEVTDTNPASKDDRATSGTKPAIVETGAE
VNVPMFIQIGSVIRVDTRTGEYIERVKK
>Mature_187_residues
PSISTVSKGSIIRFKGEPHSIESLIHRTPGNLRAFYQANMKNLKTGRNVEYRFSSSETVDVIVTERKQYQYLYRDGSDFV
MMDNNTFEQINVPEVALGEGANFMKDNINVTIVFSDDGSILQVELPTFVEVEVTDTNPASKDDRATSGTKPAIVETGAEV
NVPMFIQIGSVIRVDTRTGEYIERVKK

Specific function: Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing t

COG id: COG0231

COG function: function code J; Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the elongation factor P family

Homologues:

Organism=Escherichia coli, GI1790590, Length=178, Percent_Identity=39.8876404494382, Blast_Score=138, Evalue=3e-34,
Organism=Escherichia coli, GI87082061, Length=189, Percent_Identity=26.984126984127, Blast_Score=86, Evalue=1e-18,

Paralogues:

None

Copy number: 1600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): EFP_CHLCH (Q3ATP1)

Other databases:

- EMBL:   CP000108
- RefSeq:   YP_378677.1
- ProteinModelPortal:   Q3ATP1
- SMR:   Q3ATP1
- STRING:   Q3ATP1
- GeneID:   3748006
- GenomeReviews:   CP000108_GR
- KEGG:   cch:Cag_0361
- eggNOG:   COG0231
- HOGENOM:   HBG303311
- OMA:   MISSNDF
- ProtClustDB:   PRK00529
- BioCyc:   CCHL340177:CAG_0361-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00141
- InterPro:   IPR015365
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR020599
- InterPro:   IPR013185
- InterPro:   IPR001059
- InterPro:   IPR013852
- InterPro:   IPR011768
- InterPro:   IPR014722
- InterPro:   IPR008991
- Gene3D:   G3DSA:2.40.50.140
- Gene3D:   G3DSA:2.30.30.30
- PIRSF:   PIRSF005901
- SMART:   SM00841
- TIGRFAMs:   TIGR00038

Pfam domain/function: PF01132 EFP; PF08207 EFP_N; PF09285 Elong-fact-P_C; SSF50249 Nucleic_acid_OB; SSF50104 Transl_SH3_like

EC number: NA

Molecular weight: Translated: 21049; Mature: 20918

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS01275 EFP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSISTVSKGSIIRFKGEPHSIESLIHRTPGNLRAFYQANMKNLKTGRNVEYRFSSSETV
CCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCEEEEEECCHHHCCCCCCEEEEECCCCEE
DVIVTERKQYQYLYRDGSDFVMMDNNTFEQINVPEVALGEGANFMKDNINVTIVFSDDGS
EEEEECCCCEEEEEECCCCEEEECCCCEEECCCCEEEECCCCCEEECCCEEEEEECCCCC
ILQVELPTFVEVEVTDTNPASKDDRATSGTKPAIVETGAEVNVPMFIQIGSVIRVDTRTG
EEEEECCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCEEEEECCCC
EYIERVKK
HHHHHHCC
>Mature Secondary Structure 
PSISTVSKGSIIRFKGEPHSIESLIHRTPGNLRAFYQANMKNLKTGRNVEYRFSSSETV
CCCCCCCCCCEEEEECCCHHHHHHHHCCCCCEEEEEECCHHHCCCCCCEEEEECCCCEE
DVIVTERKQYQYLYRDGSDFVMMDNNTFEQINVPEVALGEGANFMKDNINVTIVFSDDGS
EEEEECCCCEEEEEECCCCEEEECCCCEEECCCCEEEECCCCCEEECCCEEEEEECCCCC
ILQVELPTFVEVEVTDTNPASKDDRATSGTKPAIVETGAEVNVPMFIQIGSVIRVDTRTG
EEEEECCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCEEEEECCCC
EYIERVKK
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA