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The map label for this gene is yjhC [C]

Identifier: 78188265

GI number: 78188265

Start: 309943

End: 311076

Strand: Reverse

Name: yjhC [C]

Synonym: Cag_0284

Alternate gene names: 78188265

Gene position: 311076-309943 (Counterclockwise)

Preceding gene: 78188266

Following gene: 78188264

Centisome position: 12.09

GC content: 49.47

Gene sequence:

>1134_bases
ATGAGCAGCAACATAAAGATTGGTTTTATTGGAAGTGGATGGTCGCGCATTGCCCAAGCACCAGCATTTTCGTTAATGGA
TAATGTAAGCATGGCAGCCGTTGCCAGCCCAACTGCCGATCATCGGCAGAAATTCATGAAGATGTTTGACGTAGAACATG
GCTTTGCTGATTGGCGCGATTTATTGCAGTGCGACCTTGATTTTGTTTGCGTTACCACTCCCCCGTTTCTCCATAAAGAG
ATGGTAGAAGGTGTTTTACGCAGCGGCAAAGGTGTGCTGTGCGAAAAACCATTTGCCCTGAGCGTTGCCGATGCAACCGA
AATGGCTGACGTGGCAACCCGCACTCCGCTTTTAGCATTGGTTGACCATCAACTTCGCTTTCATCCCGCTGTACGCCACA
TGAAGCAGATGATTGATGGCGGCGAAATTGGCAAAGTTTTTGAAGTTCGCGCGGTGGTAAATCTTGCCAGCCGCAATAAA
ACAGACCTACCGTGGTCGTGGTGGAGCGATGCCACTCGTGGTGGCGGCGCACTTGGCGCTATTGGCTCCCATTTAATTGA
TTTAAACCGCTACCTTGTGGGCGAAATTGCTGAAGTATCCTGCAACCTCGGCACCAGCATTGCACACCGCCCCGACGGCA
ACGGCAACCTGTTGCCCGTTACCTCCGATGACCATTTTGCTATGATGATGAAGTTTGGACGCTCTTCGGTAGCACTTGGC
AGCTCATCACTTATGCACGTTACCACCGTTGGTGCTTACACATGGTTTTCGTTTGAAGTAGTGGGAAGCTTAAAAACCAT
TCGCCTTGATGGCGGTGGACGGCTGTGGGAAGTCTATAACGACAATGCACAACGTGGGCGCAGCTTAATTGACATGCCTC
GCTGGAAGCAAATTGAGCCAATACTACCTTGGGATGAATTAGTGTTGCAAGAAAAAATCAAACAATCCTCCTTAGCCGTA
CACGGCATTTTTGCGGTAGGCTTTGCCTTTCTTGCACACCGCATAGTAAAAGCGCTACAATGCGGCGAAAAAGCTATTCT
GGATGCCGCCACCTTTGCTGATGGCTTAATGATTCAACGAGTACTGCACGCAGGCACCGAGTCGCATCAGCAACGCAACT
GGGTAAAAATTTAA

Upstream 100 bases:

>100_bases
ATAATGGTGATTGAGAGCAGTCAGCCTTTGCTCTAAATATTACACAAACAAGTAAGGGCGACCGCAATAGTCGCCCTTTT
TTTATGGCAAAAATAGCACT

Downstream 100 bases:

>100_bases
GCAGATGGCGTGGGTATATCTTCTACTTGCAGGGTGCCTTGAATGCGCATGGGCAATTGGCTTAAAATATAGTGCAGGCT
TTACAAAGCCGCTCCCCTCA

Product: Gfo/Idh/MocA family oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MSSNIKIGFIGSGWSRIAQAPAFSLMDNVSMAAVASPTADHRQKFMKMFDVEHGFADWRDLLQCDLDFVCVTTPPFLHKE
MVEGVLRSGKGVLCEKPFALSVADATEMADVATRTPLLALVDHQLRFHPAVRHMKQMIDGGEIGKVFEVRAVVNLASRNK
TDLPWSWWSDATRGGGALGAIGSHLIDLNRYLVGEIAEVSCNLGTSIAHRPDGNGNLLPVTSDDHFAMMMKFGRSSVALG
SSSLMHVTTVGAYTWFSFEVVGSLKTIRLDGGGRLWEVYNDNAQRGRSLIDMPRWKQIEPILPWDELVLQEKIKQSSLAV
HGIFAVGFAFLAHRIVKALQCGEKAILDAATFADGLMIQRVLHAGTESHQQRNWVKI

Sequences:

>Translated_377_residues
MSSNIKIGFIGSGWSRIAQAPAFSLMDNVSMAAVASPTADHRQKFMKMFDVEHGFADWRDLLQCDLDFVCVTTPPFLHKE
MVEGVLRSGKGVLCEKPFALSVADATEMADVATRTPLLALVDHQLRFHPAVRHMKQMIDGGEIGKVFEVRAVVNLASRNK
TDLPWSWWSDATRGGGALGAIGSHLIDLNRYLVGEIAEVSCNLGTSIAHRPDGNGNLLPVTSDDHFAMMMKFGRSSVALG
SSSLMHVTTVGAYTWFSFEVVGSLKTIRLDGGGRLWEVYNDNAQRGRSLIDMPRWKQIEPILPWDELVLQEKIKQSSLAV
HGIFAVGFAFLAHRIVKALQCGEKAILDAATFADGLMIQRVLHAGTESHQQRNWVKI
>Mature_376_residues
SSNIKIGFIGSGWSRIAQAPAFSLMDNVSMAAVASPTADHRQKFMKMFDVEHGFADWRDLLQCDLDFVCVTTPPFLHKEM
VEGVLRSGKGVLCEKPFALSVADATEMADVATRTPLLALVDHQLRFHPAVRHMKQMIDGGEIGKVFEVRAVVNLASRNKT
DLPWSWWSDATRGGGALGAIGSHLIDLNRYLVGEIAEVSCNLGTSIAHRPDGNGNLLPVTSDDHFAMMMKFGRSSVALGS
SSLMHVTTVGAYTWFSFEVVGSLKTIRLDGGGRLWEVYNDNAQRGRSLIDMPRWKQIEPILPWDELVLQEKIKQSSLAVH
GIFAVGFAFLAHRIVKALQCGEKAILDAATFADGLMIQRVLHAGTESHQQRNWVKI

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI226371727, Length=380, Percent_Identity=26.8421052631579, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI9506675, Length=338, Percent_Identity=26.6272189349112, Blast_Score=81, Evalue=1e-15,
Organism=Escherichia coli, GI87082405, Length=236, Percent_Identity=26.6949152542373, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1787574, Length=209, Percent_Identity=26.7942583732057, Blast_Score=67, Evalue=2e-12,
Organism=Drosophila melanogaster, GI19920536, Length=321, Percent_Identity=28.6604361370716, Blast_Score=95, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 41541; Mature: 41410

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNIKIGFIGSGWSRIAQAPAFSLMDNVSMAAVASPTADHRQKFMKMFDVEHGFADWRD
CCCCEEEEEECCCHHHHHHCCHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHH
LLQCDLDFVCVTTPPFLHKEMVEGVLRSGKGVLCEKPFALSVADATEMADVATRTPLLAL
HHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCEECCCCEEEECCHHHHHHHHHHCHHHHH
VDHQLRFHPAVRHMKQMIDGGEIGKVFEVRAVVNLASRNKTDLPWSWWSDATRGGGALGA
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCHHHH
IGSHLIDLNRYLVGEIAEVSCNLGTSIAHRPDGNGNLLPVTSDDHFAMMMKFGRSSVALG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCEECC
SSSLMHVTTVGAYTWFSFEVVGSLKTIRLDGGGRLWEVYNDNAQRGRSLIDMPRWKQIEP
CCCEEEEEEECHHHEEHEEEECCEEEEEECCCCEEEEEECCCHHHCCHHHCCCCCCCCCC
ILPWDELVLQEKIKQSSLAVHGIFAVGFAFLAHRIVKALQCGEKAILDAATFADGLMIQR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VLHAGTESHQQRNWVKI
HHHCCCHHHHCCCCCCC
>Mature Secondary Structure 
SSNIKIGFIGSGWSRIAQAPAFSLMDNVSMAAVASPTADHRQKFMKMFDVEHGFADWRD
CCCEEEEEECCCHHHHHHCCHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHH
LLQCDLDFVCVTTPPFLHKEMVEGVLRSGKGVLCEKPFALSVADATEMADVATRTPLLAL
HHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCEECCCCEEEECCHHHHHHHHHHCHHHHH
VDHQLRFHPAVRHMKQMIDGGEIGKVFEVRAVVNLASRNKTDLPWSWWSDATRGGGALGA
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCHHHH
IGSHLIDLNRYLVGEIAEVSCNLGTSIAHRPDGNGNLLPVTSDDHFAMMMKFGRSSVALG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCEECC
SSSLMHVTTVGAYTWFSFEVVGSLKTIRLDGGGRLWEVYNDNAQRGRSLIDMPRWKQIEP
CCCEEEEEEECHHHEEHEEEECCEEEEEECCCCEEEEEECCCHHHCCHHHCCCCCCCCCC
ILPWDELVLQEKIKQSSLAVHGIFAVGFAFLAHRIVKALQCGEKAILDAATFADGLMIQR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VLHAGTESHQQRNWVKI
HHHCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]