| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is ttuB [H]
Identifier: 78067216
GI number: 78067216
Start: 2852872
End: 2854176
Strand: Direct
Name: ttuB [H]
Synonym: Bcep18194_A5747
Alternate gene names: 78067216
Gene position: 2852872-2854176 (Clockwise)
Preceding gene: 78067215
Following gene: 78067217
Centisome position: 77.23
GC content: 65.21
Gene sequence:
>1305_bases ATGGCAACATCGACGCAGTCGCTGCCGGGCTCGTCCGGCGCATTCGAGGAAGCAACCTACCGCAAGGTGTCGTGGCGGCT CGTGCCGCTCCTGCTGCTGTGCTACGTGGTCGCGTATCTCGACCGCGTGAACGTCGGGTTCGCGAAGCTGCAGATGGCGA GCGACCTGAACCTCAGCGACACCGTCTACGGGCTCGGCGCCGGGATCTTCTTCTTCGGCTACTTCCTCTTCGAAGTGCCG AGCAACATCATCCTGCACAAGGTCGGCGCGCGCGTGTGGATCGCACGCATCATGGCGACGTGGGGCGTGATCTCGATCCT GACGATGTTCGTCACGACGCCCACGATGTTCTACGTGATGCGCTTCCTGCTCGGCGTCGCTGAAGCGGGCTTCTTCCCCG GCGTGATCCTCTACCTCACCTACTGGTATCCCGCGCACCGGCGCGGCCGGATGACGACGTTCTTCATGACGGCCGTCGCG CTGTCCGGCGTGATCGGCGGGCCGCTCTCGGGCTTCATCCTGAAAGCGTTCGACGGCATCAGCGGGTGGCACGGCTGGCA ATGGCTGTTCCTGCTCGAGGGGATCCCGTCGGTGCTGGTCGGCGTGGTCGTGTTCCTCAAGCTGGACGAGCGGATCGAGA AGGCGAACTGGCTGACCGACGACGAAAAGGCACTGCTCACGCGCAACGTCGATGCTGAAGAAGCCACCAAGGAAGACCTG CCGCTCGGCGCCGTGATGTCGAGCCCGCGCGTGTGGCTGATGGCGCTGATCTACTTCTCGTTCGTGATGGGGCTCTACGG CGTCGGCTTCTGGCTGCCGACGATCATCAAGGCCACCGGCGTGACCGACACGTTCACGATCGGCCTGCTGTCCGCGATTC CGTATGCGGCCGCAGTGGTCGCGATGATCCTGATCGCACGCAGCGCGGACCGGCACCGCGAACGCCGCTGGCACGTCGCG ATTCCGGCCGCAATCGGTGCGCTCGGGCTCGTCCTGTCGGTGATCTGGGCGCACCAGACCGCGCTTGCGATGCTCGGCCT CACGCTCGCGACGATCGGCATCCTGACGACGCTGCCGCTGTTCTGGAGCCTGCCGACCGCGTTCCTTGGCGGCACGGCGG CCGCGGCCGGCATCGCGATGATCAACTCGATCGGCAACCTCGCCGGCTTCCTCAGCCCGTACATGATGGGCTGGCTCAAG CAGGCAACGGGCGCCAACGATTCCGGCATGTACATGCTCGCCGGGTTTCTCGTGCTCGGCGGGCTGTTGGCATTGTCAGT GCCGAAGCGACTGGTCGACAAGTAA
Upstream 100 bases:
>100_bases ATGGGACCCAAGTAACCGCTAAAGCGCTAACTTTGATCGACCGCGAAGCATGGGACCCAAGTAACCGCTAAAGCGCTAAC TTTGATCGACAGGAGACAAC
Downstream 100 bases:
>100_bases CCCTGAACGCATGACGTCCTCCGGCCGATAACCGACCGACACCCGAAACGCCCCGCTGGCCGGAACCGCTCCGGCCGGCG GGGCGTTTCTGCTTCCGCGC
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 433
Protein sequence:
>434_residues MATSTQSLPGSSGAFEEATYRKVSWRLVPLLLLCYVVAYLDRVNVGFAKLQMASDLNLSDTVYGLGAGIFFFGYFLFEVP SNIILHKVGARVWIARIMATWGVISILTMFVTTPTMFYVMRFLLGVAEAGFFPGVILYLTYWYPAHRRGRMTTFFMTAVA LSGVIGGPLSGFILKAFDGISGWHGWQWLFLLEGIPSVLVGVVVFLKLDERIEKANWLTDDEKALLTRNVDAEEATKEDL PLGAVMSSPRVWLMALIYFSFVMGLYGVGFWLPTIIKATGVTDTFTIGLLSAIPYAAAVVAMILIARSADRHRERRWHVA IPAAIGALGLVLSVIWAHQTALAMLGLTLATIGILTTLPLFWSLPTAFLGGTAAAAGIAMINSIGNLAGFLSPYMMGWLK QATGANDSGMYMLAGFLVLGGLLALSVPKRLVDK
Sequences:
>Translated_434_residues MATSTQSLPGSSGAFEEATYRKVSWRLVPLLLLCYVVAYLDRVNVGFAKLQMASDLNLSDTVYGLGAGIFFFGYFLFEVP SNIILHKVGARVWIARIMATWGVISILTMFVTTPTMFYVMRFLLGVAEAGFFPGVILYLTYWYPAHRRGRMTTFFMTAVA LSGVIGGPLSGFILKAFDGISGWHGWQWLFLLEGIPSVLVGVVVFLKLDERIEKANWLTDDEKALLTRNVDAEEATKEDL PLGAVMSSPRVWLMALIYFSFVMGLYGVGFWLPTIIKATGVTDTFTIGLLSAIPYAAAVVAMILIARSADRHRERRWHVA IPAAIGALGLVLSVIWAHQTALAMLGLTLATIGILTTLPLFWSLPTAFLGGTAAAAGIAMINSIGNLAGFLSPYMMGWLK QATGANDSGMYMLAGFLVLGGLLALSVPKRLVDK >Mature_433_residues ATSTQSLPGSSGAFEEATYRKVSWRLVPLLLLCYVVAYLDRVNVGFAKLQMASDLNLSDTVYGLGAGIFFFGYFLFEVPS NIILHKVGARVWIARIMATWGVISILTMFVTTPTMFYVMRFLLGVAEAGFFPGVILYLTYWYPAHRRGRMTTFFMTAVAL SGVIGGPLSGFILKAFDGISGWHGWQWLFLLEGIPSVLVGVVVFLKLDERIEKANWLTDDEKALLTRNVDAEEATKEDLP LGAVMSSPRVWLMALIYFSFVMGLYGVGFWLPTIIKATGVTDTFTIGLLSAIPYAAAVVAMILIARSADRHRERRWHVAI PAAIGALGLVLSVIWAHQTALAMLGLTLATIGILTTLPLFWSLPTAFLGGTAAAAGIAMINSIGNLAGFLSPYMMGWLKQ ATGANDSGMYMLAGFLVLGGLLALSVPKRLVDK
Specific function: Component of the tartrate utilization system and may allow entry of tartrate and tartrate dehydrogenase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Homo sapiens, GI6912666, Length=260, Percent_Identity=24.2307692307692, Blast_Score=73, Evalue=4e-13, Organism=Escherichia coli, GI87082071, Length=413, Percent_Identity=37.2881355932203, Blast_Score=263, Evalue=1e-71, Organism=Escherichia coli, GI2367379, Length=304, Percent_Identity=25.3289473684211, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1789152, Length=439, Percent_Identity=20.9567198177677, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1789515, Length=421, Percent_Identity=23.0403800475059, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI87082320, Length=410, Percent_Identity=21.4634146341463, Blast_Score=67, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6321698, Length=326, Percent_Identity=25.4601226993865, Blast_Score=97, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6322025, Length=340, Percent_Identity=25, Blast_Score=85, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6319876, Length=321, Percent_Identity=23.3644859813084, Blast_Score=77, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6324410, Length=162, Percent_Identity=26.5432098765432, Blast_Score=75, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6319250, Length=213, Percent_Identity=23.4741784037559, Blast_Score=67, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6322612, Length=227, Percent_Identity=24.6696035242291, Blast_Score=67, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6323032, Length=391, Percent_Identity=23.5294117647059, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI24584153, Length=355, Percent_Identity=22.5352112676056, Blast_Score=83, Evalue=4e-16, Organism=Drosophila melanogaster, GI24654215, Length=346, Percent_Identity=24.2774566473988, Blast_Score=69, Evalue=8e-12, Organism=Drosophila melanogaster, GI19922400, Length=343, Percent_Identity=24.4897959183673, Blast_Score=69, Evalue=8e-12, Organism=Drosophila melanogaster, GI20130135, Length=433, Percent_Identity=23.094688221709, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24655271, Length=433, Percent_Identity=23.094688221709, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI28573708, Length=271, Percent_Identity=25.0922509225092, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI28573707, Length=271, Percent_Identity=25.0922509225092, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI24648416, Length=310, Percent_Identity=22.5806451612903, Blast_Score=66, Evalue=5e-11, Organism=Drosophila melanogaster, GI21356189, Length=310, Percent_Identity=22.5806451612903, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004744 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47222; Mature: 47090
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSTQSLPGSSGAFEEATYRKVSWRLVPLLLLCYVVAYLDRVNVGFAKLQMASDLNLSD CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCH TVYGLGAGIFFFGYFLFEVPSNIILHKVGARVWIARIMATWGVISILTMFVTTPTMFYVM HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFLLGVAEAGFFPGVILYLTYWYPAHRRGRMTTFFMTAVALSGVIGGPLSGFILKAFDGI HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC SGWHGWQWLFLLEGIPSVLVGVVVFLKLDERIEKANWLTDDEKALLTRNVDAEEATKEDL CCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHCC PLGAVMSSPRVWLMALIYFSFVMGLYGVGFWLPTIIKATGVTDTFTIGLLSAIPYAAAVV CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH AMILIARSADRHRERRWHVAIPAAIGALGLVLSVIWAHQTALAMLGLTLATIGILTTLPL HHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FWSLPTAFLGGTAAAAGIAMINSIGNLAGFLSPYMMGWLKQATGANDSGMYMLAGFLVLG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH GLLALSVPKRLVDK HHHHHHHHHHHHCC >Mature Secondary Structure ATSTQSLPGSSGAFEEATYRKVSWRLVPLLLLCYVVAYLDRVNVGFAKLQMASDLNLSD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCH TVYGLGAGIFFFGYFLFEVPSNIILHKVGARVWIARIMATWGVISILTMFVTTPTMFYVM HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFLLGVAEAGFFPGVILYLTYWYPAHRRGRMTTFFMTAVALSGVIGGPLSGFILKAFDGI HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC SGWHGWQWLFLLEGIPSVLVGVVVFLKLDERIEKANWLTDDEKALLTRNVDAEEATKEDL CCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHCC PLGAVMSSPRVWLMALIYFSFVMGLYGVGFWLPTIIKATGVTDTFTIGLLSAIPYAAAVV CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH AMILIARSADRHRERRWHVAIPAAIGALGLVLSVIWAHQTALAMLGLTLATIGILTTLPL HHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FWSLPTAFLGGTAAAAGIAMINSIGNLAGFLSPYMMGWLKQATGANDSGMYMLAGFLVLG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH GLLALSVPKRLVDK HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7592429 [H]