Click here to switch to the map view.

The map label for this gene is 78067217

Identifier: 78067217

GI number: 78067217

Start: 2854318

End: 2854815

Strand: Direct

Name: 78067217

Synonym: Bcep18194_A5748

Alternate gene names: NA

Gene position: 2854318-2854815 (Clockwise)

Preceding gene: 78067216

Following gene: 78067218

Centisome position: 77.27

GC content: 63.65

Gene sequence:

>498_bases
ATGACTTTCCCGCCGCAAAAATGCTCCCTATTAATCCGTTTACCATGGAACAATAAGGAACATTTTGAGCACCACTGGCC
GAACATGCTCCATACCATCGAAGAGTCCGCCGCCCGCCTGCGTCTCCACCCGAAGACCGTCCTGCGCTTCATCCGCGAGG
GCAAGCTGCCCGCAACGCGGGTCGGCCGTGCATACCGCATCCTCGACGCCGACCTCGCCGCGTTCGCGCAAACGAAGCCG
GCCGCGCCCATGCCGCGTGCGGTGCGCGTCACCAGCATCGTCGACATTCCGGACGCATCGCAGTCGCTGCACCAGTACCT
GTCGCGGTCGCTGCATGCGATGGCATCCGGCCGCACGTCGTATGTCGACCCGGTGCGAATCGACGTCACGTTCGATCCCG
CCGGCAGCCTGGTCAAGATCATCGTTGCCGCAACGCCGGCCGACACGGCCGCGCTGATGTCGTCGGTCGAGGCACTGTTG
CAGCAAAGCGGGACATGA

Upstream 100 bases:

>100_bases
CCCGAAACGCCCCGCTGGCCGGAACCGCTCCGGCCGGCGGGGCGTTTCTGCTTCCGCGCACGCACCGCCTGAGCGATACG
GGTTCGGTATCCCGCAAACG

Downstream 100 bases:

>100_bases
GCGCGATCGTCAGGTCGCCCCGCCACGCCCGCGCGATTCGCTCGGCTTACGAGGCTGCGCTGTCGCACTGGCCGGCTGGA
CATCGGCGCATCACCGTGCA

Product: excisionase/Xis, DNA-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MTFPPQKCSLLIRLPWNNKEHFEHHWPNMLHTIEESAARLRLHPKTVLRFIREGKLPATRVGRAYRILDADLAAFAQTKP
AAPMPRAVRVTSIVDIPDASQSLHQYLSRSLHAMASGRTSYVDPVRIDVTFDPAGSLVKIIVAATPADTAALMSSVEALL
QQSGT

Sequences:

>Translated_165_residues
MTFPPQKCSLLIRLPWNNKEHFEHHWPNMLHTIEESAARLRLHPKTVLRFIREGKLPATRVGRAYRILDADLAAFAQTKP
AAPMPRAVRVTSIVDIPDASQSLHQYLSRSLHAMASGRTSYVDPVRIDVTFDPAGSLVKIIVAATPADTAALMSSVEALL
QQSGT
>Mature_164_residues
TFPPQKCSLLIRLPWNNKEHFEHHWPNMLHTIEESAARLRLHPKTVLRFIREGKLPATRVGRAYRILDADLAAFAQTKPA
APMPRAVRVTSIVDIPDASQSLHQYLSRSLHAMASGRTSYVDPVRIDVTFDPAGSLVKIIVAATPADTAALMSSVEALLQ
QSGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18258; Mature: 18127

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFPPQKCSLLIRLPWNNKEHFEHHWPNMLHTIEESAARLRLHPKTVLRFIREGKLPATR
CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHCCCCCHHH
VGRAYRILDADLAAFAQTKPAAPMPRAVRVTSIVDIPDASQSLHQYLSRSLHAMASGRTS
HCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCC
YVDPVRIDVTFDPAGSLVKIIVAATPADTAALMSSVEALLQQSGT
CCCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TFPPQKCSLLIRLPWNNKEHFEHHWPNMLHTIEESAARLRLHPKTVLRFIREGKLPATR
CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHCCCCCHHH
VGRAYRILDADLAAFAQTKPAAPMPRAVRVTSIVDIPDASQSLHQYLSRSLHAMASGRTS
HCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCC
YVDPVRIDVTFDPAGSLVKIIVAATPADTAALMSSVEALLQQSGT
CCCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA