| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066715
Identifier: 78066715
GI number: 78066715
Start: 2299262
End: 2300482
Strand: Reverse
Name: 78066715
Synonym: Bcep18194_A5246
Alternate gene names: NA
Gene position: 2300482-2299262 (Counterclockwise)
Preceding gene: 78066716
Following gene: 78066713
Centisome position: 62.27
GC content: 69.12
Gene sequence:
>1221_bases ATGAACCGACGTGATTTTCTGACGCTGACGGGCGCTGCGGCCGCGGCCGGCGTGTCGATGTGGCAGGCGCCTGCGATGGC GGCTTCCGTGGCGCAGGCGGGGCGCCAACCGGCGCCCGGGTATGCGAACGTGCTGATCCTCGTCGAGTTGAAGGGCGGCA ACGATGGCCTCAACACGGTGGTGCCGTATGCGGACCCGCTGTATTACCAGTTCCGGCGCAGCATCGGCATCAAGCGCGAG CAGGTGCTGCAACTCGACGCACACACGGGGCTGCATCCGTCGCTTGCGCCGCTGATGCCGCTGTGGCGCGACGGGCAGGT CGCGGTCGTGCAGGGCGTCGGCTATCCGCAGCCGAACCTGTCGCACTTTCGCTCGATCGAGATCTGGGATACCGCGTCGC GCTCGGATCAATACCTGCACGAAGGCTGGCTCACGCGCACGTTCGCGCAAGCACCCGTACCGCCCGGTTTCGCGGCCGAC GGCGTCGTGCTCGGCAGCGCCGAGATGGGGCCGCTGTCGAACGGTGCGCGTGCGATCGCGCTCGTCAATCCCGCGCAGTT CATCCGTGCGGCCCGGCTTGCCGAGCCGTCGTCGCTGCGCGAACAGAACCCTGCGCTCGCCCACATCATCGACGTCGAGA ACGACATCGTGAAGGCGGCCGACCGGCTGCGCCCGCGCGGCGGGATGCGTGAATTCCGGACAGCCTTTCCGGCCGGCGCG TTCGGCACGTCGGTCAAGACCGCGATGCAGGTGCTGGCCGCATGCGAAGCGTCCGGGCCCGGCGCGCAGGATGGTGTCGC GGTGCTGCGTCTGACGCTCAACGGCTTCGATACGCACCAGAACCAGCCGGGGCAGCAGGCTGCACTGCTCAAGCAGTTCG CGGAAGGGATGAGCGCGATGCGCGGCGCGTTGATCGAGCTCGGCCGCTGGAACCAGACGCTCGTGATGACGTATGCGGAA TTCGGGCGGCGCGTGCGCGAGAACCAGAGCAACGGCACCGATCACGGCACGGCCGCGCCGCATTTCGTGATGGGCGGCCG CGTGGCCGGCGGGCTGTACGGTGCGCCGCCGGCGCTTGGGCGGCTCGACGGCAACGGCAATCTGCCGGTCGCGGTCGATT TCCGCCAGCTCTACGCGACCGTGCTCGGGCCGTGGTGGGGGCTCGACGCGACCCGCGTGCTGCAGCAGCGCTTCGATACG CTGCCGTTGTTGAAGGCGTGA
Upstream 100 bases:
>100_bases CTGCTGATGGATCCGGCCTATCAACTGAAATGATTCGAACGACGATGAAGCGGGGAGCCGGTGCGGCAAAGGTGCCGGAC GGCGAACCAAAGGATGCGCG
Downstream 100 bases:
>100_bases GGAGCGAGGATCAGCGGCGGCGCGCGGTGCGCCACGCGATCCACAGCTTGCGGATCGGCGTCAGCGCGATGCGCTGATGC AGCACCTGGTAGCCGTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MNRRDFLTLTGAAAAAGVSMWQAPAMAASVAQAGRQPAPGYANVLILVELKGGNDGLNTVVPYADPLYYQFRRSIGIKRE QVLQLDAHTGLHPSLAPLMPLWRDGQVAVVQGVGYPQPNLSHFRSIEIWDTASRSDQYLHEGWLTRTFAQAPVPPGFAAD GVVLGSAEMGPLSNGARAIALVNPAQFIRAARLAEPSSLREQNPALAHIIDVENDIVKAADRLRPRGGMREFRTAFPAGA FGTSVKTAMQVLAACEASGPGAQDGVAVLRLTLNGFDTHQNQPGQQAALLKQFAEGMSAMRGALIELGRWNQTLVMTYAE FGRRVRENQSNGTDHGTAAPHFVMGGRVAGGLYGAPPALGRLDGNGNLPVAVDFRQLYATVLGPWWGLDATRVLQQRFDT LPLLKA
Sequences:
>Translated_406_residues MNRRDFLTLTGAAAAAGVSMWQAPAMAASVAQAGRQPAPGYANVLILVELKGGNDGLNTVVPYADPLYYQFRRSIGIKRE QVLQLDAHTGLHPSLAPLMPLWRDGQVAVVQGVGYPQPNLSHFRSIEIWDTASRSDQYLHEGWLTRTFAQAPVPPGFAAD GVVLGSAEMGPLSNGARAIALVNPAQFIRAARLAEPSSLREQNPALAHIIDVENDIVKAADRLRPRGGMREFRTAFPAGA FGTSVKTAMQVLAACEASGPGAQDGVAVLRLTLNGFDTHQNQPGQQAALLKQFAEGMSAMRGALIELGRWNQTLVMTYAE FGRRVRENQSNGTDHGTAAPHFVMGGRVAGGLYGAPPALGRLDGNGNLPVAVDFRQLYATVLGPWWGLDATRVLQQRFDT LPLLKA >Mature_406_residues MNRRDFLTLTGAAAAAGVSMWQAPAMAASVAQAGRQPAPGYANVLILVELKGGNDGLNTVVPYADPLYYQFRRSIGIKRE QVLQLDAHTGLHPSLAPLMPLWRDGQVAVVQGVGYPQPNLSHFRSIEIWDTASRSDQYLHEGWLTRTFAQAPVPPGFAAD GVVLGSAEMGPLSNGARAIALVNPAQFIRAARLAEPSSLREQNPALAHIIDVENDIVKAADRLRPRGGMREFRTAFPAGA FGTSVKTAMQVLAACEASGPGAQDGVAVLRLTLNGFDTHQNQPGQQAALLKQFAEGMSAMRGALIELGRWNQTLVMTYAE FGRRVRENQSNGTDHGTAAPHFVMGGRVAGGLYGAPPALGRLDGNGNLPVAVDFRQLYATVLGPWWGLDATRVLQQRFDT LPLLKA
Specific function: Unknown
COG id: COG4102
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43502; Mature: 43502
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRRDFLTLTGAAAAAGVSMWQAPAMAASVAQAGRQPAPGYANVLILVELKGGNDGLNTV CCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCC VPYADPLYYQFRRSIGIKREQVLQLDAHTGLHPSLAPLMPLWRDGQVAVVQGVGYPQPNL CCCCCHHHHHHHHHHCCCHHHHEEECCCCCCCCCHHHHCCCCCCCCEEEEECCCCCCCCH SHFRSIEIWDTASRSDQYLHEGWLTRTFAQAPVPPGFAADGVVLGSAEMGPLSNGARAIA HHHCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCEEEE LVNPAQFIRAARLAEPSSLREQNPALAHIIDVENDIVKAADRLRPRGGMREFRTAFPAGA EECHHHHHHHHHCCCCHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCHHHHHHHCCCCC FGTSVKTAMQVLAACEASGPGAQDGVAVLRLTLNGFDTHQNQPGQQAALLKQFAEGMSAM CCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH RGALIELGRWNQTLVMTYAEFGRRVRENQSNGTDHGTAAPHFVMGGRVAGGLYGAPPALG HHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCEEECCCCCCCCCCC RLDGNGNLPVAVDFRQLYATVLGPWWGLDATRVLQQRFDTLPLLKA EECCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNRRDFLTLTGAAAAAGVSMWQAPAMAASVAQAGRQPAPGYANVLILVELKGGNDGLNTV CCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCC VPYADPLYYQFRRSIGIKREQVLQLDAHTGLHPSLAPLMPLWRDGQVAVVQGVGYPQPNL CCCCCHHHHHHHHHHCCCHHHHEEECCCCCCCCCHHHHCCCCCCCCEEEEECCCCCCCCH SHFRSIEIWDTASRSDQYLHEGWLTRTFAQAPVPPGFAADGVVLGSAEMGPLSNGARAIA HHHCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCEEEE LVNPAQFIRAARLAEPSSLREQNPALAHIIDVENDIVKAADRLRPRGGMREFRTAFPAGA EECHHHHHHHHHCCCCHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCHHHHHHHCCCCC FGTSVKTAMQVLAACEASGPGAQDGVAVLRLTLNGFDTHQNQPGQQAALLKQFAEGMSAM CCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH RGALIELGRWNQTLVMTYAEFGRRVRENQSNGTDHGTAAPHFVMGGRVAGGLYGAPPALG HHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCEEECCCCCCCCCCC RLDGNGNLPVAVDFRQLYATVLGPWWGLDATRVLQQRFDTLPLLKA EECCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA