Definition Burkholderia sp. 383 chromosome 1, complete genome.
Accession NC_007510
Length 3,694,126

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The map label for this gene is 78066716

Identifier: 78066716

GI number: 78066716

Start: 2300550

End: 2302052

Strand: Reverse

Name: 78066716

Synonym: Bcep18194_A5247

Alternate gene names: NA

Gene position: 2302052-2300550 (Counterclockwise)

Preceding gene: 78066717

Following gene: 78066715

Centisome position: 62.32

GC content: 67.8

Gene sequence:

>1503_bases
ATGAAAGCGAACGTTGCCGCACCGGCGCCGTCGCCCGCGATGCAGTCGCCGCTCGATGCCGACGATGCATTGTTTTTCCT
GAGTCGTACCGGTTTTTCTCCCGCGCCCGCCGATGTTGCGCGCGTCGTCGGCATGACGCGCGCGCAGGTCGTGGCCGACA
CGCTCGGCAACGTTCGCCGCGACCCCGTCACGACGTGGCCCGACTGGATCGCCGAGTTGCCGCCGACGCGCGCGCAGCGC
CAGGCGCTGACCCCCGACATGCGGCGCGACGAGCAGCGCGAGCGCAACGTTCGTTACGATGCGCTGCGCGCGGCGTGGGT
CAACGAGATGATCGTGACGCCGTCGCCGCTCACCGAACGCATGACGCTGTTCTGGCACGGGCACTTCACGTCGGGGCAGG
ACAAGGTGCCTTACCCGCAGACGATGGCGGCACAGAACGCACTGTTTCGCCGCGAGGCGCTCGGCAATTTCGGCGTGCTG
CTGCACGCGGTCGCGAAGGACCCGGCGATGCTGCAGTACCTCGACGGCGCGAGCAATCGCAAGGGGCGCCCGAACGAAAA
TTTCGCGCGCGAGGTGATGGAGCTGTTCACGCTCGGCGAAGGGCATTACACGCAATACGACGTGACCGAAGCCGCACGCG
CGATGACGGGCTGGACCGTCGATCCCGATACTTATCGCTTCCAGGTGCGGCCGGATCTGCACGATGCGGGCGACAAGACG
ATCCTCGGCGAAACGGGGCCGTTCGACGGCGACGGCTTTCTCGACATCCTGCTGAAGCGGCCCGGCACCGCGCGCTTCAT
CGCCGCCAAGCTGTGGCGCGAGTTCGTGTCGGATACGCCCGATCCGGGCGCGCTCGATGCGGTGGCCGAACGGTTTCGGT
CGAGCGGCTACGACATTCGCGCGGCGCTCGCCGCGCTGTGGTCGACCGACGCCTTCTGGGATCCACGCAACCGCGGCGTG
CTCGTCAAGTCGCCGGCGGAATTCGTCGTCGGGTCGGTGCGGCTGTTCGACGTGTCATACGGCGATCCGCAGATGCTCGC
GAACACCGTGCGCACGCTCGGGCAGAACCTGTTCTACCCGCCGAACGTGAAGGGCTGGCCCGGTGGCGCGCTGTGGATCA
ACAGCACCACGCTGCTCGCGCGCAAGCAGTTCGTCGAGCAACTGTTTCGCGCGACGGAGACAGCCGGCATGCACCCGCCG
GCGCATGCGATGTCGCCGGCGCCGAATGTCCGCGCGCATGCGATGCCGGTGGTCGATACGGCGTCCGCCGCCGGCATGCG
CAGCACGCCCGCCAAGCCCGCGCGCGCCGGCCTGCGTTTCGACCTCGAACGCTGGCTTGCCCAATATCGCGCACGGCCGC
AGGCGATCGCGGGCTTGTCGACCGAGCTTCAGTTGCAGCACGCGGTGCTGCAACTGTCGCCGGTCGCGGCGATCGACACG
GATTCGACCGGCAGCGCGTATCTCGAGGCGCTGCTGATGGATCCGGCCTATCAACTGAAATGA

Upstream 100 bases:

>100_bases
GCGCGGAAAAGATTCGTAGCAATTTTTCCGTCAACTTTCGCCTGCCGATTGCCGTTGTACCGGCATCCGCACCGCCGGTG
CGTTCCGGGAGTCCATGACG

Downstream 100 bases:

>100_bases
TTCGAACGACGATGAAGCGGGGAGCCGGTGCGGCAAAGGTGCCGGACGGCGAACCAAAGGATGCGCGATGAACCGACGTG
ATTTTCTGACGCTGACGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 500; Mature: 500

Protein sequence:

>500_residues
MKANVAAPAPSPAMQSPLDADDALFFLSRTGFSPAPADVARVVGMTRAQVVADTLGNVRRDPVTTWPDWIAELPPTRAQR
QALTPDMRRDEQRERNVRYDALRAAWVNEMIVTPSPLTERMTLFWHGHFTSGQDKVPYPQTMAAQNALFRREALGNFGVL
LHAVAKDPAMLQYLDGASNRKGRPNENFAREVMELFTLGEGHYTQYDVTEAARAMTGWTVDPDTYRFQVRPDLHDAGDKT
ILGETGPFDGDGFLDILLKRPGTARFIAAKLWREFVSDTPDPGALDAVAERFRSSGYDIRAALAALWSTDAFWDPRNRGV
LVKSPAEFVVGSVRLFDVSYGDPQMLANTVRTLGQNLFYPPNVKGWPGGALWINSTTLLARKQFVEQLFRATETAGMHPP
AHAMSPAPNVRAHAMPVVDTASAAGMRSTPAKPARAGLRFDLERWLAQYRARPQAIAGLSTELQLQHAVLQLSPVAAIDT
DSTGSAYLEALLMDPAYQLK

Sequences:

>Translated_500_residues
MKANVAAPAPSPAMQSPLDADDALFFLSRTGFSPAPADVARVVGMTRAQVVADTLGNVRRDPVTTWPDWIAELPPTRAQR
QALTPDMRRDEQRERNVRYDALRAAWVNEMIVTPSPLTERMTLFWHGHFTSGQDKVPYPQTMAAQNALFRREALGNFGVL
LHAVAKDPAMLQYLDGASNRKGRPNENFAREVMELFTLGEGHYTQYDVTEAARAMTGWTVDPDTYRFQVRPDLHDAGDKT
ILGETGPFDGDGFLDILLKRPGTARFIAAKLWREFVSDTPDPGALDAVAERFRSSGYDIRAALAALWSTDAFWDPRNRGV
LVKSPAEFVVGSVRLFDVSYGDPQMLANTVRTLGQNLFYPPNVKGWPGGALWINSTTLLARKQFVEQLFRATETAGMHPP
AHAMSPAPNVRAHAMPVVDTASAAGMRSTPAKPARAGLRFDLERWLAQYRARPQAIAGLSTELQLQHAVLQLSPVAAIDT
DSTGSAYLEALLMDPAYQLK
>Mature_500_residues
MKANVAAPAPSPAMQSPLDADDALFFLSRTGFSPAPADVARVVGMTRAQVVADTLGNVRRDPVTTWPDWIAELPPTRAQR
QALTPDMRRDEQRERNVRYDALRAAWVNEMIVTPSPLTERMTLFWHGHFTSGQDKVPYPQTMAAQNALFRREALGNFGVL
LHAVAKDPAMLQYLDGASNRKGRPNENFAREVMELFTLGEGHYTQYDVTEAARAMTGWTVDPDTYRFQVRPDLHDAGDKT
ILGETGPFDGDGFLDILLKRPGTARFIAAKLWREFVSDTPDPGALDAVAERFRSSGYDIRAALAALWSTDAFWDPRNRGV
LVKSPAEFVVGSVRLFDVSYGDPQMLANTVRTLGQNLFYPPNVKGWPGGALWINSTTLLARKQFVEQLFRATETAGMHPP
AHAMSPAPNVRAHAMPVVDTASAAGMRSTPAKPARAGLRFDLERWLAQYRARPQAIAGLSTELQLQHAVLQLSPVAAIDT
DSTGSAYLEALLMDPAYQLK

Specific function: Unknown

COG id: COG5267

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55129; Mature: 55129

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: PS00116 DNA_POLYMERASE_B

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKANVAAPAPSPAMQSPLDADDALFFLSRTGFSPAPADVARVVGMTRAQVVADTLGNVRR
CCCCCCCCCCCCHHCCCCCCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
DPVTTWPDWIAELPPTRAQRQALTPDMRRDEQRERNVRYDALRAAWVNEMIVTPSPLTER
CCCCCCHHHHHHCCCCHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCEEECCCCCCCC
MTLFWHGHFTSGQDKVPYPQTMAAQNALFRREALGNFGVLLHAVAKDPAMLQYLDGASNR
EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCCCCC
KGRPNENFAREVMELFTLGEGHYTQYDVTEAARAMTGWTVDPDTYRFQVRPDLHDAGDKT
CCCCCHHHHHHHHHHHHCCCCCCCEECHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCE
ILGETGPFDGDGFLDILLKRPGTARFIAAKLWREFVSDTPDPGALDAVAERFRSSGYDIR
EECCCCCCCCCCHHHHEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHH
AALAALWSTDAFWDPRNRGVLVKSPAEFVVGSVRLFDVSYGDPQMLANTVRTLGQNLFYP
HHHHHHHCCCCCCCCCCCCEEEECCHHHHEEEEEEEEECCCCHHHHHHHHHHHHHCCCCC
PNVKGWPGGALWINSTTLLARKQFVEQLFRATETAGMHPPAHAMSPAPNVRAHAMPVVDT
CCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCEEC
ASAAGMRSTPAKPARAGLRFDLERWLAQYRARPQAIAGLSTELQLQHAVLQLSPVAAIDT
CCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHCCCCEEECC
DSTGSAYLEALLMDPAYQLK
CCCHHHHHHHHHHCCHHCCC
>Mature Secondary Structure
MKANVAAPAPSPAMQSPLDADDALFFLSRTGFSPAPADVARVVGMTRAQVVADTLGNVRR
CCCCCCCCCCCCHHCCCCCCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
DPVTTWPDWIAELPPTRAQRQALTPDMRRDEQRERNVRYDALRAAWVNEMIVTPSPLTER
CCCCCCHHHHHHCCCCHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCEEECCCCCCCC
MTLFWHGHFTSGQDKVPYPQTMAAQNALFRREALGNFGVLLHAVAKDPAMLQYLDGASNR
EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCCCCC
KGRPNENFAREVMELFTLGEGHYTQYDVTEAARAMTGWTVDPDTYRFQVRPDLHDAGDKT
CCCCCHHHHHHHHHHHHCCCCCCCEECHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCE
ILGETGPFDGDGFLDILLKRPGTARFIAAKLWREFVSDTPDPGALDAVAERFRSSGYDIR
EECCCCCCCCCCHHHHEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHH
AALAALWSTDAFWDPRNRGVLVKSPAEFVVGSVRLFDVSYGDPQMLANTVRTLGQNLFYP
HHHHHHHCCCCCCCCCCCCEEEECCHHHHEEEEEEEEECCCCHHHHHHHHHHHHHCCCCC
PNVKGWPGGALWINSTTLLARKQFVEQLFRATETAGMHPPAHAMSPAPNVRAHAMPVVDT
CCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCEEC
ASAAGMRSTPAKPARAGLRFDLERWLAQYRARPQAIAGLSTELQLQHAVLQLSPVAAIDT
CCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHCCCCEEECC
DSTGSAYLEALLMDPAYQLK
CCCHHHHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA