| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066716
Identifier: 78066716
GI number: 78066716
Start: 2300550
End: 2302052
Strand: Reverse
Name: 78066716
Synonym: Bcep18194_A5247
Alternate gene names: NA
Gene position: 2302052-2300550 (Counterclockwise)
Preceding gene: 78066717
Following gene: 78066715
Centisome position: 62.32
GC content: 67.8
Gene sequence:
>1503_bases ATGAAAGCGAACGTTGCCGCACCGGCGCCGTCGCCCGCGATGCAGTCGCCGCTCGATGCCGACGATGCATTGTTTTTCCT GAGTCGTACCGGTTTTTCTCCCGCGCCCGCCGATGTTGCGCGCGTCGTCGGCATGACGCGCGCGCAGGTCGTGGCCGACA CGCTCGGCAACGTTCGCCGCGACCCCGTCACGACGTGGCCCGACTGGATCGCCGAGTTGCCGCCGACGCGCGCGCAGCGC CAGGCGCTGACCCCCGACATGCGGCGCGACGAGCAGCGCGAGCGCAACGTTCGTTACGATGCGCTGCGCGCGGCGTGGGT CAACGAGATGATCGTGACGCCGTCGCCGCTCACCGAACGCATGACGCTGTTCTGGCACGGGCACTTCACGTCGGGGCAGG ACAAGGTGCCTTACCCGCAGACGATGGCGGCACAGAACGCACTGTTTCGCCGCGAGGCGCTCGGCAATTTCGGCGTGCTG CTGCACGCGGTCGCGAAGGACCCGGCGATGCTGCAGTACCTCGACGGCGCGAGCAATCGCAAGGGGCGCCCGAACGAAAA TTTCGCGCGCGAGGTGATGGAGCTGTTCACGCTCGGCGAAGGGCATTACACGCAATACGACGTGACCGAAGCCGCACGCG CGATGACGGGCTGGACCGTCGATCCCGATACTTATCGCTTCCAGGTGCGGCCGGATCTGCACGATGCGGGCGACAAGACG ATCCTCGGCGAAACGGGGCCGTTCGACGGCGACGGCTTTCTCGACATCCTGCTGAAGCGGCCCGGCACCGCGCGCTTCAT CGCCGCCAAGCTGTGGCGCGAGTTCGTGTCGGATACGCCCGATCCGGGCGCGCTCGATGCGGTGGCCGAACGGTTTCGGT CGAGCGGCTACGACATTCGCGCGGCGCTCGCCGCGCTGTGGTCGACCGACGCCTTCTGGGATCCACGCAACCGCGGCGTG CTCGTCAAGTCGCCGGCGGAATTCGTCGTCGGGTCGGTGCGGCTGTTCGACGTGTCATACGGCGATCCGCAGATGCTCGC GAACACCGTGCGCACGCTCGGGCAGAACCTGTTCTACCCGCCGAACGTGAAGGGCTGGCCCGGTGGCGCGCTGTGGATCA ACAGCACCACGCTGCTCGCGCGCAAGCAGTTCGTCGAGCAACTGTTTCGCGCGACGGAGACAGCCGGCATGCACCCGCCG GCGCATGCGATGTCGCCGGCGCCGAATGTCCGCGCGCATGCGATGCCGGTGGTCGATACGGCGTCCGCCGCCGGCATGCG CAGCACGCCCGCCAAGCCCGCGCGCGCCGGCCTGCGTTTCGACCTCGAACGCTGGCTTGCCCAATATCGCGCACGGCCGC AGGCGATCGCGGGCTTGTCGACCGAGCTTCAGTTGCAGCACGCGGTGCTGCAACTGTCGCCGGTCGCGGCGATCGACACG GATTCGACCGGCAGCGCGTATCTCGAGGCGCTGCTGATGGATCCGGCCTATCAACTGAAATGA
Upstream 100 bases:
>100_bases GCGCGGAAAAGATTCGTAGCAATTTTTCCGTCAACTTTCGCCTGCCGATTGCCGTTGTACCGGCATCCGCACCGCCGGTG CGTTCCGGGAGTCCATGACG
Downstream 100 bases:
>100_bases TTCGAACGACGATGAAGCGGGGAGCCGGTGCGGCAAAGGTGCCGGACGGCGAACCAAAGGATGCGCGATGAACCGACGTG ATTTTCTGACGCTGACGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MKANVAAPAPSPAMQSPLDADDALFFLSRTGFSPAPADVARVVGMTRAQVVADTLGNVRRDPVTTWPDWIAELPPTRAQR QALTPDMRRDEQRERNVRYDALRAAWVNEMIVTPSPLTERMTLFWHGHFTSGQDKVPYPQTMAAQNALFRREALGNFGVL LHAVAKDPAMLQYLDGASNRKGRPNENFAREVMELFTLGEGHYTQYDVTEAARAMTGWTVDPDTYRFQVRPDLHDAGDKT ILGETGPFDGDGFLDILLKRPGTARFIAAKLWREFVSDTPDPGALDAVAERFRSSGYDIRAALAALWSTDAFWDPRNRGV LVKSPAEFVVGSVRLFDVSYGDPQMLANTVRTLGQNLFYPPNVKGWPGGALWINSTTLLARKQFVEQLFRATETAGMHPP AHAMSPAPNVRAHAMPVVDTASAAGMRSTPAKPARAGLRFDLERWLAQYRARPQAIAGLSTELQLQHAVLQLSPVAAIDT DSTGSAYLEALLMDPAYQLK
Sequences:
>Translated_500_residues MKANVAAPAPSPAMQSPLDADDALFFLSRTGFSPAPADVARVVGMTRAQVVADTLGNVRRDPVTTWPDWIAELPPTRAQR QALTPDMRRDEQRERNVRYDALRAAWVNEMIVTPSPLTERMTLFWHGHFTSGQDKVPYPQTMAAQNALFRREALGNFGVL LHAVAKDPAMLQYLDGASNRKGRPNENFAREVMELFTLGEGHYTQYDVTEAARAMTGWTVDPDTYRFQVRPDLHDAGDKT ILGETGPFDGDGFLDILLKRPGTARFIAAKLWREFVSDTPDPGALDAVAERFRSSGYDIRAALAALWSTDAFWDPRNRGV LVKSPAEFVVGSVRLFDVSYGDPQMLANTVRTLGQNLFYPPNVKGWPGGALWINSTTLLARKQFVEQLFRATETAGMHPP AHAMSPAPNVRAHAMPVVDTASAAGMRSTPAKPARAGLRFDLERWLAQYRARPQAIAGLSTELQLQHAVLQLSPVAAIDT DSTGSAYLEALLMDPAYQLK >Mature_500_residues MKANVAAPAPSPAMQSPLDADDALFFLSRTGFSPAPADVARVVGMTRAQVVADTLGNVRRDPVTTWPDWIAELPPTRAQR QALTPDMRRDEQRERNVRYDALRAAWVNEMIVTPSPLTERMTLFWHGHFTSGQDKVPYPQTMAAQNALFRREALGNFGVL LHAVAKDPAMLQYLDGASNRKGRPNENFAREVMELFTLGEGHYTQYDVTEAARAMTGWTVDPDTYRFQVRPDLHDAGDKT ILGETGPFDGDGFLDILLKRPGTARFIAAKLWREFVSDTPDPGALDAVAERFRSSGYDIRAALAALWSTDAFWDPRNRGV LVKSPAEFVVGSVRLFDVSYGDPQMLANTVRTLGQNLFYPPNVKGWPGGALWINSTTLLARKQFVEQLFRATETAGMHPP AHAMSPAPNVRAHAMPVVDTASAAGMRSTPAKPARAGLRFDLERWLAQYRARPQAIAGLSTELQLQHAVLQLSPVAAIDT DSTGSAYLEALLMDPAYQLK
Specific function: Unknown
COG id: COG5267
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55129; Mature: 55129
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: PS00116 DNA_POLYMERASE_B
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKANVAAPAPSPAMQSPLDADDALFFLSRTGFSPAPADVARVVGMTRAQVVADTLGNVRR CCCCCCCCCCCCHHCCCCCCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC DPVTTWPDWIAELPPTRAQRQALTPDMRRDEQRERNVRYDALRAAWVNEMIVTPSPLTER CCCCCCHHHHHHCCCCHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCEEECCCCCCCC MTLFWHGHFTSGQDKVPYPQTMAAQNALFRREALGNFGVLLHAVAKDPAMLQYLDGASNR EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCCCCC KGRPNENFAREVMELFTLGEGHYTQYDVTEAARAMTGWTVDPDTYRFQVRPDLHDAGDKT CCCCCHHHHHHHHHHHHCCCCCCCEECHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCE ILGETGPFDGDGFLDILLKRPGTARFIAAKLWREFVSDTPDPGALDAVAERFRSSGYDIR EECCCCCCCCCCHHHHEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHH AALAALWSTDAFWDPRNRGVLVKSPAEFVVGSVRLFDVSYGDPQMLANTVRTLGQNLFYP HHHHHHHCCCCCCCCCCCCEEEECCHHHHEEEEEEEEECCCCHHHHHHHHHHHHHCCCCC PNVKGWPGGALWINSTTLLARKQFVEQLFRATETAGMHPPAHAMSPAPNVRAHAMPVVDT CCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCEEC ASAAGMRSTPAKPARAGLRFDLERWLAQYRARPQAIAGLSTELQLQHAVLQLSPVAAIDT CCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHCCCCEEECC DSTGSAYLEALLMDPAYQLK CCCHHHHHHHHHHCCHHCCC >Mature Secondary Structure MKANVAAPAPSPAMQSPLDADDALFFLSRTGFSPAPADVARVVGMTRAQVVADTLGNVRR CCCCCCCCCCCCHHCCCCCCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC DPVTTWPDWIAELPPTRAQRQALTPDMRRDEQRERNVRYDALRAAWVNEMIVTPSPLTER CCCCCCHHHHHHCCCCHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCEEECCCCCCCC MTLFWHGHFTSGQDKVPYPQTMAAQNALFRREALGNFGVLLHAVAKDPAMLQYLDGASNR EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCCCCC KGRPNENFAREVMELFTLGEGHYTQYDVTEAARAMTGWTVDPDTYRFQVRPDLHDAGDKT CCCCCHHHHHHHHHHHHCCCCCCCEECHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCE ILGETGPFDGDGFLDILLKRPGTARFIAAKLWREFVSDTPDPGALDAVAERFRSSGYDIR EECCCCCCCCCCHHHHEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHH AALAALWSTDAFWDPRNRGVLVKSPAEFVVGSVRLFDVSYGDPQMLANTVRTLGQNLFYP HHHHHHHCCCCCCCCCCCCEEEECCHHHHEEEEEEEEECCCCHHHHHHHHHHHHHCCCCC PNVKGWPGGALWINSTTLLARKQFVEQLFRATETAGMHPPAHAMSPAPNVRAHAMPVVDT CCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCEEC ASAAGMRSTPAKPARAGLRFDLERWLAQYRARPQAIAGLSTELQLQHAVLQLSPVAAIDT CCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHCCCCEEECC DSTGSAYLEALLMDPAYQLK CCCHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA