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The map label for this gene is 78066589

Identifier: 78066589

GI number: 78066589

Start: 2163643

End: 2164419

Strand: Reverse

Name: 78066589

Synonym: Bcep18194_A5120

Alternate gene names: NA

Gene position: 2164419-2163643 (Counterclockwise)

Preceding gene: 78066590

Following gene: 161702959

Centisome position: 58.59

GC content: 63.45

Gene sequence:

>777_bases
ATGACTCCGATTCTTGTTTTTGACATCGAGACCATTCCCGATGTCGACGGCATTCGCCGTCTGGAAGACCTGCCCGCGAC
GCTCGACGATGCCGCGGTGGCCGAACATGCGTTCGCCGCCCGCCGCGAGAAGACCGGCAGCGATTTCCTGCCGCACCACC
TGCAGCGCATCGCGGCGATCTCGTGCGTGTTTCGCGACAACAACGGGTTTCGCGTGCGCTCGCTCGGCACGCCGCAGGAC
AACGAAGCGACGCTGATCCAGTCGTTCTACCGCGTGATCGAGAAATACACGCCGCAGCTCGTGTCGTGGAACGGTGGCGG
CTTCGATCTGCCGGTGCTCCATTACCGCGCGCTCGTGCACGGCGTCCCCGCGTCCCGTTACTGGGATCTCGGCGAGGACG
ACCGCGATTTCAAGTGGAACAACTACATCTCGCGCTACCACTCGCGGCATACCGACCTGATGGATGTGCTCGCGATGTAT
CAGGCGCGTGCGAATGCGCCGCTCGACGCGCTCGCGAAGATGTGCGGCTTTCCGGGCAAGCTCGGGATGGACGGCAGCCA
GGTGTGGCCGGCGTTCCAGGCCGGTCGGATCGAGGAAATCCGCAACTATTGCGAAACCGACGTCGTCAATACCTACCTGC
TGTATTGCCGGTTCCAGTTGATGCGCGGCGGCCTGACGCCGAGCGAGTATGCGGACGAGATCCTGCTCGTGAAGAACTCG
CTCGCGCAGGAGCCTGCGTCGCACTGGGCCGAATACCTGGCCGGTTTCGACGCGTAG

Upstream 100 bases:

>100_bases
CACGCGCGAGCGCGTGCGCCAGATCCAGCAGGAAGCGCTGGTGCGCCTCAAGCGGTTTTTCGCCTCCAACGGTGTGCGCA
AGGACGCCGTTCTGTAACTG

Downstream 100 bases:

>100_bases
CGCGGGCGCGGTGTCCCACGGCCGGTGGCGCGATCATGCCAGTTCGAGCAGCACGGGCTGGTGATCCGACGCGCGCACAT
CGCCGTCGATCTCGCAGCGC

Product: 3'-5' exonuclease

Products: NA

Alternate protein names: Polysaccharide Biosynthesis Protein; 3-5' Exonuclease PolB-Like Protein; Propable PolB; Polysaccharide Biosynthesis Protein WlaX; Lipoprotein SmpA/OmlA Family; 3&Apos; Large-Conductance Mechanosensitive Channel

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MTPILVFDIETIPDVDGIRRLEDLPATLDDAAVAEHAFAARREKTGSDFLPHHLQRIAAISCVFRDNNGFRVRSLGTPQD
NEATLIQSFYRVIEKYTPQLVSWNGGGFDLPVLHYRALVHGVPASRYWDLGEDDRDFKWNNYISRYHSRHTDLMDVLAMY
QARANAPLDALAKMCGFPGKLGMDGSQVWPAFQAGRIEEIRNYCETDVVNTYLLYCRFQLMRGGLTPSEYADEILLVKNS
LAQEPASHWAEYLAGFDA

Sequences:

>Translated_258_residues
MTPILVFDIETIPDVDGIRRLEDLPATLDDAAVAEHAFAARREKTGSDFLPHHLQRIAAISCVFRDNNGFRVRSLGTPQD
NEATLIQSFYRVIEKYTPQLVSWNGGGFDLPVLHYRALVHGVPASRYWDLGEDDRDFKWNNYISRYHSRHTDLMDVLAMY
QARANAPLDALAKMCGFPGKLGMDGSQVWPAFQAGRIEEIRNYCETDVVNTYLLYCRFQLMRGGLTPSEYADEILLVKNS
LAQEPASHWAEYLAGFDA
>Mature_257_residues
TPILVFDIETIPDVDGIRRLEDLPATLDDAAVAEHAFAARREKTGSDFLPHHLQRIAAISCVFRDNNGFRVRSLGTPQDN
EATLIQSFYRVIEKYTPQLVSWNGGGFDLPVLHYRALVHGVPASRYWDLGEDDRDFKWNNYISRYHSRHTDLMDVLAMYQ
ARANAPLDALAKMCGFPGKLGMDGSQVWPAFQAGRIEEIRNYCETDVVNTYLLYCRFQLMRGGLTPSEYADEILLVKNSL
AQEPASHWAEYLAGFDA

Specific function: Unknown

COG id: COG3298

COG function: function code L; Predicted 3'-5' exonuclease related to the exonuclease domain of PolB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29250; Mature: 29119

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPILVFDIETIPDVDGIRRLEDLPATLDDAAVAEHAFAARREKTGSDFLPHHLQRIAAI
CCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
SCVFRDNNGFRVRSLGTPQDNEATLIQSFYRVIEKYTPQLVSWNGGGFDLPVLHYRALVH
HHEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHH
GVPASRYWDLGEDDRDFKWNNYISRYHSRHTDLMDVLAMYQARANAPLDALAKMCGFPGK
CCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC
LGMDGSQVWPAFQAGRIEEIRNYCETDVVNTYLLYCRFQLMRGGLTPSEYADEILLVKNS
CCCCCHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LAQEPASHWAEYLAGFDA
HHCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
TPILVFDIETIPDVDGIRRLEDLPATLDDAAVAEHAFAARREKTGSDFLPHHLQRIAAI
CCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
SCVFRDNNGFRVRSLGTPQDNEATLIQSFYRVIEKYTPQLVSWNGGGFDLPVLHYRALVH
HHEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHH
GVPASRYWDLGEDDRDFKWNNYISRYHSRHTDLMDVLAMYQARANAPLDALAKMCGFPGK
CCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC
LGMDGSQVWPAFQAGRIEEIRNYCETDVVNTYLLYCRFQLMRGGLTPSEYADEILLVKNS
CCCCCHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LAQEPASHWAEYLAGFDA
HHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA