| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065865
Identifier: 78065865
GI number: 78065865
Start: 1352913
End: 1353875
Strand: Reverse
Name: 78065865
Synonym: Bcep18194_A4394
Alternate gene names: NA
Gene position: 1353875-1352913 (Counterclockwise)
Preceding gene: 78065866
Following gene: 78065860
Centisome position: 36.65
GC content: 68.02
Gene sequence:
>963_bases ATGAGGTTCGCCCTGCTCCTCGTTGTCGCCTTCGCCATGTGGTGCGGCGTGCCGCACGATGCGCGGGCCGAGTCGTGCAC GGCCACCGCGTCGACGGTGAGCTTCGGCTCGGTCAGCCCGATCTCGCGCGCGTCGGTCGCCGCGACCGGCACCGTCAGCA TCACCTGCACGTGGTCGGCCATCACGCTGACGCCGAACGTGCTCGTATGCCTGAGTCTCGGCGGCACGAGCCCGCGCAGC CTCGTCAACGGCACCAACGCGATGCAGTACGACCTCTTTCTCGATGGCGGACACTCGGTCGCGTGGGGCTCGATTTACTC CGGCACGACGCCGGCATCGGTGACGCTCGTCAAACCCGCGCTCGGCACGAGCGCAAGCGCCACGGTCACGATCTACGGAC AGATCACGTCGAACCAGCCGACCGTGCCGACGACCGGCAACAGCACGACCACCTACTCGCAGACGTTCGGGGGCAACACG ACATCGATCAACGCGGGGTTCTACCTGCTCGGTGCGCCAAGCTGCGCGTCGCTGACGGCGTCGAACGGCACCTTCCCGTT CAGCGCGACCGCCAACGTCATCAACAACTGCAACATCAGCGCGACCAACGTCAGCTTCGGCACGGCGAGCGTGCTGTCGG GCGCACTCGCGGCGACCGGTTCGATCACCGCGCAGTGCACCAACGGCGACGCGTGGAAGATCGCGCTGAACGGCGGTAGC AGCGGCAGCGTGACCGCGCGCCACATGCAGCGCAGCGGCGGAGGCGGCACGATCGGCTACGGGCTTTACACGGATGCCGC GCGCTCGATCGCGTGGGGCGACGGCACGGGCGGCAGTTCGACGGTCACGGGTGTCGGTACGGGTACGTCGCAGGTCGTGA CCGTGTATGGCGCGGTGCCGGCGCAAACGACGCCCGCGCCCGGCAACTACAGCGACACGATCACCGCGACGATCAGTTTC TAG
Upstream 100 bases:
>100_bases TCGATTACGGCACGCAGCGCTGCGCAGCGGAATTCGCGTTCACGGCGCCCGGCAACGGCACGCTGCCGACCATCGGCCCG CTCACCTGCCGGGCTGCGCC
Downstream 100 bases:
>100_bases CGTTCCGATCCGCAGCATCAGCAGGCGCGCACGCCGCGCGCGCCGCGCGCGCCGTTCAGAACGTGACGGTCCAGGTGGGC AGCACACCCGCGCCGATGCT
Product: putative secreted pili protein involved in motility and biofilm formation
Products: NA
Alternate protein names: Spore Coat U Domain-Containing Protein; Spore Coat Protein U; Spore Coat Protein U Domain-Containing; Spore Coat Protein U Domain Protein; Spore Coat U Domain Protein
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MRFALLLVVAFAMWCGVPHDARAESCTATASTVSFGSVSPISRASVAATGTVSITCTWSAITLTPNVLVCLSLGGTSPRS LVNGTNAMQYDLFLDGGHSVAWGSIYSGTTPASVTLVKPALGTSASATVTIYGQITSNQPTVPTTGNSTTTYSQTFGGNT TSINAGFYLLGAPSCASLTASNGTFPFSATANVINNCNISATNVSFGTASVLSGALAATGSITAQCTNGDAWKIALNGGS SGSVTARHMQRSGGGGTIGYGLYTDAARSIAWGDGTGGSSTVTGVGTGTSQVVTVYGAVPAQTTPAPGNYSDTITATISF
Sequences:
>Translated_320_residues MRFALLLVVAFAMWCGVPHDARAESCTATASTVSFGSVSPISRASVAATGTVSITCTWSAITLTPNVLVCLSLGGTSPRS LVNGTNAMQYDLFLDGGHSVAWGSIYSGTTPASVTLVKPALGTSASATVTIYGQITSNQPTVPTTGNSTTTYSQTFGGNT TSINAGFYLLGAPSCASLTASNGTFPFSATANVINNCNISATNVSFGTASVLSGALAATGSITAQCTNGDAWKIALNGGS SGSVTARHMQRSGGGGTIGYGLYTDAARSIAWGDGTGGSSTVTGVGTGTSQVVTVYGAVPAQTTPAPGNYSDTITATISF >Mature_320_residues MRFALLLVVAFAMWCGVPHDARAESCTATASTVSFGSVSPISRASVAATGTVSITCTWSAITLTPNVLVCLSLGGTSPRS LVNGTNAMQYDLFLDGGHSVAWGSIYSGTTPASVTLVKPALGTSASATVTIYGQITSNQPTVPTTGNSTTTYSQTFGGNT TSINAGFYLLGAPSCASLTASNGTFPFSATANVINNCNISATNVSFGTASVLSGALAATGSITAQCTNGDAWKIALNGGS SGSVTARHMQRSGGGGTIGYGLYTDAARSIAWGDGTGGSSTVTGVGTGTSQVVTVYGAVPAQTTPAPGNYSDTITATISF
Specific function: Unknown
COG id: COG5430
COG function: function code S; Uncharacterized secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31850; Mature: 31850
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFALLLVVAFAMWCGVPHDARAESCTATASTVSFGSVSPISRASVAATGTVSITCTWSA CHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEECEEEEEEEEEE ITLTPNVLVCLSLGGTSPRSLVNGTNAMQYDLFLDGGHSVAWGSIYSGTTPASVTLVKPA EEECCCEEEEEEECCCCCHHHHCCCCCEEEEEEEECCCEEEECEEECCCCCCEEEEEECC LGTSASATVTIYGQITSNQPTVPTTGNSTTTYSQTFGGNTTSINAGFYLLGAPSCASLTA CCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEECCEEEEECCCCCEEEC SNGTFPFSATANVINNCNISATNVSFGTASVLSGALAATGSITAQCTNGDAWKIALNGGS CCCCCCCCCHHHHHCCCCEEEEEECCCHHHHHHHHHEECCCEEEEECCCCEEEEEEECCC SGSVTARHMQRSGGGGTIGYGLYTDAARSIAWGDGTGGSSTVTGVGTGTSQVVTVYGAVP CCCEEEEEHHCCCCCCEEEECEECCHHHEEECCCCCCCCCEEEEECCCCCEEEEEEECCC AQTTPAPGNYSDTITATISF CCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure MRFALLLVVAFAMWCGVPHDARAESCTATASTVSFGSVSPISRASVAATGTVSITCTWSA CHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEECEEEEEEEEEE ITLTPNVLVCLSLGGTSPRSLVNGTNAMQYDLFLDGGHSVAWGSIYSGTTPASVTLVKPA EEECCCEEEEEEECCCCCHHHHCCCCCEEEEEEEECCCEEEECEEECCCCCCEEEEEECC LGTSASATVTIYGQITSNQPTVPTTGNSTTTYSQTFGGNTTSINAGFYLLGAPSCASLTA CCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEECCEEEEECCCCCEEEC SNGTFPFSATANVINNCNISATNVSFGTASVLSGALAATGSITAQCTNGDAWKIALNGGS CCCCCCCCCHHHHHCCCCEEEEEECCCHHHHHHHHHEECCCEEEEECCCCEEEEEEECCC SGSVTARHMQRSGGGGTIGYGLYTDAARSIAWGDGTGGSSTVTGVGTGTSQVVTVYGAVP CCCEEEEEHHCCCCCCEEEECEECCHHHEEECCCCCCCCCEEEEECCCCCEEEEEEECCC AQTTPAPGNYSDTITATISF CCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA