| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is modB [H]
Identifier: 78065813
GI number: 78065813
Start: 1294092
End: 1294916
Strand: Reverse
Name: modB [H]
Synonym: Bcep18194_A4342
Alternate gene names: 78065813
Gene position: 1294916-1294092 (Counterclockwise)
Preceding gene: 78065814
Following gene: 78065812
Centisome position: 35.05
GC content: 69.82
Gene sequence:
>825_bases ATGCTCGACCTGACTTTCCCGCTGCGCTGGCGCGTCGCGCTCGTCGCGCCGGCGCTTGCGGTGTTCGCCGCGTTCTGGCT GCTGCCGATGGCGGCGCTCGTGCAGGTGTCCGCCGACGGCGCGTTCTTCTCGCACTACGCGGCGCTGCTCGGCAATGCGC GCTACATGAGGAGCCTGGGCGAGACCGTCGCGCTGTCCGCGGGCGTCACGCTCGCGACACTCGTGCTGTCGACGATCTCG GGCCTCCTGCTCGCACGCCGCGAATTCGCGGGCAAGCGCGTGCTGCTCGCGCTGCTCACGTTCCCGCTCGCGTTCCCCGG CGTCGTCGTCGGCTTCATGGTGATCATGCTTGCCGGCCGGCAGGGGCTGATCGGCATGCTGTCCGCGAAGCTCACCGGCG ACAAGTGGGTATTCGCGTACTCGGTCGCGGGGCTGTTCATCGGCTACCTGTACTTCTCGATCCCGCGCGTGATCGTCACC GTGATCGCCGCGGCGTCGAAGCTCGACGCGTCGCTCGAGGAAGCCGCGCGTTCGCTCGGCGCATCGCCGTGGCGCATCTT CGTCGACATCGTACTGCCCGCGCTCGCGCCGGGCCTGATCGCGGCCGGCGCGATCTGCTTCGCAACCGCGATGGGCGCGT TCGGCACAGCGTTCACGCTCGCCACCGACCTGAACGTGCTGCCGATGACGATCTATACCGAGTTCACGCTGAACGCGAAC ATCGCGACGGCGGCCGGCCTGTCGATCGTGCTCGGCATCGTCACCTGGGCCGTGCTCGCGCTCGCGCGCCGCTTCACCGG CCACACCGCCGCCGCCGCGGCCTGA
Upstream 100 bases:
>100_bases CCCGCGCGAAATCGGTCGACTTCGGCAAGATGGCGGCCGGCCAGCAGGCATTCGGCCAGCAATACCTGCAGGTGATGCAG TAAGCAGCCGGACGCCATCG
Downstream 100 bases:
>100_bases GGATTCCTGCATGCAATCGCTTTCCGGCTCTTCCGCGCCGTCGCCGGCCCCCGCTCCCGCGCAGGCGAACGGCGTCGCCC GCCGCGCGCCGCGCGTCACC
Product: ABC transporter, inner membrane subunit
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MLDLTFPLRWRVALVAPALAVFAAFWLLPMAALVQVSADGAFFSHYAALLGNARYMRSLGETVALSAGVTLATLVLSTIS GLLLARREFAGKRVLLALLTFPLAFPGVVVGFMVIMLAGRQGLIGMLSAKLTGDKWVFAYSVAGLFIGYLYFSIPRVIVT VIAAASKLDASLEEAARSLGASPWRIFVDIVLPALAPGLIAAGAICFATAMGAFGTAFTLATDLNVLPMTIYTEFTLNAN IATAAGLSIVLGIVTWAVLALARRFTGHTAAAAA
Sequences:
>Translated_274_residues MLDLTFPLRWRVALVAPALAVFAAFWLLPMAALVQVSADGAFFSHYAALLGNARYMRSLGETVALSAGVTLATLVLSTIS GLLLARREFAGKRVLLALLTFPLAFPGVVVGFMVIMLAGRQGLIGMLSAKLTGDKWVFAYSVAGLFIGYLYFSIPRVIVT VIAAASKLDASLEEAARSLGASPWRIFVDIVLPALAPGLIAAGAICFATAMGAFGTAFTLATDLNVLPMTIYTEFTLNAN IATAAGLSIVLGIVTWAVLALARRFTGHTAAAAA >Mature_274_residues MLDLTFPLRWRVALVAPALAVFAAFWLLPMAALVQVSADGAFFSHYAALLGNARYMRSLGETVALSAGVTLATLVLSTIS GLLLARREFAGKRVLLALLTFPLAFPGVVVGFMVIMLAGRQGLIGMLSAKLTGDKWVFAYSVAGLFIGYLYFSIPRVIVT VIAAASKLDASLEEAARSLGASPWRIFVDIVLPALAPGLIAAGAICFATAMGAFGTAFTLATDLNVLPMTIYTEFTLNAN IATAAGLSIVLGIVTWAVLALARRFTGHTAAAAA
Specific function: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0555
COG function: function code O; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=154, Percent_Identity=33.1168831168831, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1786980, Length=172, Percent_Identity=34.3023255813954, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1786254, Length=199, Percent_Identity=25.1256281407035, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011867 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 28673; Mature: 28673
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDLTFPLRWRVALVAPALAVFAAFWLLPMAALVQVSADGAFFSHYAALLGNARYMRSLG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHH ETVALSAGVTLATLVLSTISGLLLARREFAGKRVLLALLTFPLAFPGVVVGFMVIMLAGR HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QGLIGMLSAKLTGDKWVFAYSVAGLFIGYLYFSIPRVIVTVIAAASKLDASLEEAARSLG CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ASPWRIFVDIVLPALAPGLIAAGAICFATAMGAFGTAFTLATDLNVLPMTIYTEFTLNAN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCC IATAAGLSIVLGIVTWAVLALARRFTGHTAAAAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC >Mature Secondary Structure MLDLTFPLRWRVALVAPALAVFAAFWLLPMAALVQVSADGAFFSHYAALLGNARYMRSLG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHH ETVALSAGVTLATLVLSTISGLLLARREFAGKRVLLALLTFPLAFPGVVVGFMVIMLAGR HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QGLIGMLSAKLTGDKWVFAYSVAGLFIGYLYFSIPRVIVTVIAAASKLDASLEEAARSLG CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ASPWRIFVDIVLPALAPGLIAAGAICFATAMGAFGTAFTLATDLNVLPMTIYTEFTLNAN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCC IATAAGLSIVLGIVTWAVLALARRFTGHTAAAAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]