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The map label for this gene is yccS [C]

Identifier: 78065792

GI number: 78065792

Start: 1267113

End: 1269404

Strand: Reverse

Name: yccS [C]

Synonym: Bcep18194_A4321

Alternate gene names: 78065792

Gene position: 1269404-1267113 (Counterclockwise)

Preceding gene: 78065797

Following gene: 78065791

Centisome position: 34.36

GC content: 65.71

Gene sequence:

>2292_bases
ATGCGCTATTCGGTCGAAATCAGAAAGTTTTTCTACAGCCAGTACTTTTTCGGCGGCCTGCGGATCGCGGTCGGCGTTTC
GCTGCCGGCCGTGCTGTGCCTGATCGTGTTTCACAACCGGGAGCTCGGCTTCACGATCTCGACGGGCGCGCTCGGCGCCT
GCGTCGTCGACATGCCGGGCCCGCTCAAGTACAAGCACAACGAAATGCTCGCTTGCAGCGTGATCGGTTTTCTGGCCGCG
CTCGCCACCGGCCTCGCGACACCGAACATCTTCGTGCTGTGGCTCACCATCGTGCCGCTCACCTTCGTGCTGTCGCTGAT
CGTGGTCTACGGCAACCGCTGGCCGCAGATCAGCTTCGCGACGCTGTTCATGATGGTGATGACGCTCGAGGAGAAGTTCA
CGCCGCTGGAGGCGTTCATCAATGCCGGCTGGATTCTCGCGGGCGGCCTCTGGTACACGTACTGGGCCACGCTCGTGTCG
CAATGGCAAGCGCGCCGGATCGAGCAGCAGGCGCTCGCCGAGAGCCTGTTCGCGTGCGCCGACTACCTGCTCGCGCGTGC
GCAGTTCTACGACCTCGATGCCGATCTCGACGAGTGCTACCGCAATCTCGTCGCCAAGCAGATTACTGCGGTCGAAACCC
AGGAAACCGCGCGCGACATCGTGCTGCGCAACCTGCCGAAGCTGCGCCGCGGCAAGCTCGATCCCGGCCGCACGACAATG
TACAACCTGTTCATCAACAGCGTCGACCTGCACGAGCTGTTCGTCGGCGCGCACACCGACTATCCGCTGGTGCGCAATAC
GTTCGGCGGCTCCGATCTGATCATTTTCTACCGCGACCTGATCCGCAAGGCGGCCGCCGATCTCGAGGAAATCGGCCTCG
CGGTGCTCGAGAACCGCGCACCGCACTCACGCGTCAGCGTGAAGGCCGAGTTGCGCGCGATCGAGTACGAGATCGAGCTG
ATGCGCAAGAAGAACTTCCCGGCCACCAACGCGGAAGCGTATGCGGCCGTGCTCGCCACGTTCCGGCGCATCTGGAGCGC
GACGCGCCTGATCGACCGGATGCGCCGCAACCTGTCGGGCCACGCCGATCCGCAGCAAACCGAACTGAAGATCGACAAGG
CGCTCACGCGCTTCCTGCAACGCCGCCGGATGTCGCCGCTGCTGATCTTCTCGAATCTGAACATGCGCTCGCCGAGCTTC
CGCCACGCGCTGCGCGTGACGATCGCGGTGGCGGTCGGGTTCTGGCTCGGCCGGCTGCTGCCGCTCACGAACGCGTACTG
GATCGTGATGACGACCATCATCATCCTGAAACCCGGTTACTCGCTCACCAAGCAGCGCAACGCGCAGCGGATCATCGGCA
CGCTGATCGGCTGCGCGGCGAGCATCGCGCTGATCTACACGGTGAAGGAGCCGCACCTGCTGATCGCGATCATGTTCGGG
TCGATGGTGATGAGCTACAGCCTGCTGCTGTTCAACTACGCGGCGAGCGTCGTGTTCACGTCGTCGTACGTGCTGCTGAT
GTTCCACCTGCTCGCGCCGGGCAGCATGCGGATCATCGGCGAGCGCGCGATCGACACGGTGGTCGGGTGCATGATCGCGA
TCGCCGCGAGCCGGCTGTTCCCGTACTGGGAATACCGGCTGATGGGCAAGCAGGTCGCCGACATGCTCACCGCCACCCGC
AAGTATTTCGAGGCCGTGTGGCGCGCCGGGCGCGGCATGTCGCCGCCGCCGGTGCCGGCCGCCGACGGCGCAGCCGTCGT
GCCGGTCATCGCCGCGGCCATCGAGACGCCGGCCACGACCCTCGACGACGACTACCGCTACCGCCTCGCGCGCAAGGACG
TGCACATCGCGTTCGCGAATCTCGGGCAGGCGTTCCAGCGGATGATGATCGAGCCGAAGGCCCACCAGCGCTTCGTGCCC
GAACTGAACGACCTGCTCGTGCAGACGCACGTGCTCGGCGCGCAGATCACGGCCGCCGCGCCGCTGATCCGCACCGCCTG
CGCGGCCGACGGCAGCATCCTCCATGACGACGCGCTGCATCGCGGCCTTGCCGCGGTGCTCGACAATCTCGAGAAGGCCG
AGGCCGGCGAGCCGCCGCCCGCCGATCAGCTCGACGCGTCGAAGCAGATCACGCGCGACCTCGACGCGATGGTCGTGTCC
GCGGAGAAATCCGATGCGGTGGGCGCCGAACTCACGCACGACCTGAAGGTGCTCGCGCACCAGTGCAAGCAGATGCTCGC
GTCGTCGCTGCTGATCCGCAAGGATGCGAGCGTGATCCGCCTGCCCGCCTGA

Upstream 100 bases:

>100_bases
TCGTCCGGAAAGCCAGGTTTTGCGGACCGCGAAATACGATAGACTCGTCGCCAGTCAAGATGCCGCCCCCGGGTGTCTTC
GTCTGCCATTCAGCCCATCG

Downstream 100 bases:

>100_bases
CCCAGGCTCTACCCCGCCGGTGGCCGGCCCGCGCATGCCGCGGATCGGCCCCGGCGCCCCCCGATTCAGCGATCCCCGAA
GCATGACCCGCCCGTTCCAC

Product: protein of unknown function DUF893, YccS/YhfK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 763; Mature: 763

Protein sequence:

>763_residues
MRYSVEIRKFFYSQYFFGGLRIAVGVSLPAVLCLIVFHNRELGFTISTGALGACVVDMPGPLKYKHNEMLACSVIGFLAA
LATGLATPNIFVLWLTIVPLTFVLSLIVVYGNRWPQISFATLFMMVMTLEEKFTPLEAFINAGWILAGGLWYTYWATLVS
QWQARRIEQQALAESLFACADYLLARAQFYDLDADLDECYRNLVAKQITAVETQETARDIVLRNLPKLRRGKLDPGRTTM
YNLFINSVDLHELFVGAHTDYPLVRNTFGGSDLIIFYRDLIRKAAADLEEIGLAVLENRAPHSRVSVKAELRAIEYEIEL
MRKKNFPATNAEAYAAVLATFRRIWSATRLIDRMRRNLSGHADPQQTELKIDKALTRFLQRRRMSPLLIFSNLNMRSPSF
RHALRVTIAVAVGFWLGRLLPLTNAYWIVMTTIIILKPGYSLTKQRNAQRIIGTLIGCAASIALIYTVKEPHLLIAIMFG
SMVMSYSLLLFNYAASVVFTSSYVLLMFHLLAPGSMRIIGERAIDTVVGCMIAIAASRLFPYWEYRLMGKQVADMLTATR
KYFEAVWRAGRGMSPPPVPAADGAAVVPVIAAAIETPATTLDDDYRYRLARKDVHIAFANLGQAFQRMMIEPKAHQRFVP
ELNDLLVQTHVLGAQITAAAPLIRTACAADGSILHDDALHRGLAAVLDNLEKAEAGEPPPADQLDASKQITRDLDAMVVS
AEKSDAVGAELTHDLKVLAHQCKQMLASSLLIRKDASVIRLPA

Sequences:

>Translated_763_residues
MRYSVEIRKFFYSQYFFGGLRIAVGVSLPAVLCLIVFHNRELGFTISTGALGACVVDMPGPLKYKHNEMLACSVIGFLAA
LATGLATPNIFVLWLTIVPLTFVLSLIVVYGNRWPQISFATLFMMVMTLEEKFTPLEAFINAGWILAGGLWYTYWATLVS
QWQARRIEQQALAESLFACADYLLARAQFYDLDADLDECYRNLVAKQITAVETQETARDIVLRNLPKLRRGKLDPGRTTM
YNLFINSVDLHELFVGAHTDYPLVRNTFGGSDLIIFYRDLIRKAAADLEEIGLAVLENRAPHSRVSVKAELRAIEYEIEL
MRKKNFPATNAEAYAAVLATFRRIWSATRLIDRMRRNLSGHADPQQTELKIDKALTRFLQRRRMSPLLIFSNLNMRSPSF
RHALRVTIAVAVGFWLGRLLPLTNAYWIVMTTIIILKPGYSLTKQRNAQRIIGTLIGCAASIALIYTVKEPHLLIAIMFG
SMVMSYSLLLFNYAASVVFTSSYVLLMFHLLAPGSMRIIGERAIDTVVGCMIAIAASRLFPYWEYRLMGKQVADMLTATR
KYFEAVWRAGRGMSPPPVPAADGAAVVPVIAAAIETPATTLDDDYRYRLARKDVHIAFANLGQAFQRMMIEPKAHQRFVP
ELNDLLVQTHVLGAQITAAAPLIRTACAADGSILHDDALHRGLAAVLDNLEKAEAGEPPPADQLDASKQITRDLDAMVVS
AEKSDAVGAELTHDLKVLAHQCKQMLASSLLIRKDASVIRLPA
>Mature_763_residues
MRYSVEIRKFFYSQYFFGGLRIAVGVSLPAVLCLIVFHNRELGFTISTGALGACVVDMPGPLKYKHNEMLACSVIGFLAA
LATGLATPNIFVLWLTIVPLTFVLSLIVVYGNRWPQISFATLFMMVMTLEEKFTPLEAFINAGWILAGGLWYTYWATLVS
QWQARRIEQQALAESLFACADYLLARAQFYDLDADLDECYRNLVAKQITAVETQETARDIVLRNLPKLRRGKLDPGRTTM
YNLFINSVDLHELFVGAHTDYPLVRNTFGGSDLIIFYRDLIRKAAADLEEIGLAVLENRAPHSRVSVKAELRAIEYEIEL
MRKKNFPATNAEAYAAVLATFRRIWSATRLIDRMRRNLSGHADPQQTELKIDKALTRFLQRRRMSPLLIFSNLNMRSPSF
RHALRVTIAVAVGFWLGRLLPLTNAYWIVMTTIIILKPGYSLTKQRNAQRIIGTLIGCAASIALIYTVKEPHLLIAIMFG
SMVMSYSLLLFNYAASVVFTSSYVLLMFHLLAPGSMRIIGERAIDTVVGCMIAIAASRLFPYWEYRLMGKQVADMLTATR
KYFEAVWRAGRGMSPPPVPAADGAAVVPVIAAAIETPATTLDDDYRYRLARKDVHIAFANLGQAFQRMMIEPKAHQRFVP
ELNDLLVQTHVLGAQITAAAPLIRTACAADGSILHDDALHRGLAAVLDNLEKAEAGEPPPADQLDASKQITRDLDAMVVS
AEKSDAVGAELTHDLKVLAHQCKQMLASSLLIRKDASVIRLPA

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yccS/yhfK family [H]

Homologues:

Organism=Escherichia coli, GI87081808, Length=693, Percent_Identity=23.5209235209235, Blast_Score=135, Evalue=1e-32,
Organism=Escherichia coli, GI87082248, Length=207, Percent_Identity=34.7826086956522, Blast_Score=92, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010019
- InterPro:   IPR010020 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85053; Mature: 85053

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYSVEIRKFFYSQYFFGGLRIAVGVSLPAVLCLIVFHNRELGFTISTGALGACVVDMPG
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCC
PLKYKHNEMLACSVIGFLAALATGLATPNIFVLWLTIVPLTFVLSLIVVYGNRWPQISFA
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
TLFMMVMTLEEKFTPLEAFINAGWILAGGLWYTYWATLVSQWQARRIEQQALAESLFACA
HHHHHHHHHHHHCCHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DYLLARAQFYDLDADLDECYRNLVAKQITAVETQETARDIVLRNLPKLRRGKLDPGRTTM
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHE
YNLFINSVDLHELFVGAHTDYPLVRNTFGGSDLIIFYRDLIRKAAADLEEIGLAVLENRA
EHHHHCCCCHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
PHSRVSVKAELRAIEYEIELMRKKNFPATNAEAYAAVLATFRRIWSATRLIDRMRRNLSG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HADPQQTELKIDKALTRFLQRRRMSPLLIFSNLNMRSPSFRHALRVTIAVAVGFWLGRLL
CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
PLTNAYWIVMTTIIILKPGYSLTKQRNAQRIIGTLIGCAASIALIYTVKEPHLLIAIMFG
HHCCHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHH
SMVMSYSLLLFNYAASVVFTSSYVLLMFHLLAPGSMRIIGERAIDTVVGCMIAIAASRLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHC
PYWEYRLMGKQVADMLTATRKYFEAVWRAGRGMSPPPVPAADGAAVVPVIAAAIETPATT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
LDDDYRYRLARKDVHIAFANLGQAFQRMMIEPKAHQRFVPELNDLLVQTHVLGAQITAAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH
PLIRTACAADGSILHDDALHRGLAAVLDNLEKAEAGEPPPADQLDASKQITRDLDAMVVS
HHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHEEE
AEKSDAVGAELTHDLKVLAHQCKQMLASSLLIRKDASVIRLPA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC
>Mature Secondary Structure
MRYSVEIRKFFYSQYFFGGLRIAVGVSLPAVLCLIVFHNRELGFTISTGALGACVVDMPG
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCC
PLKYKHNEMLACSVIGFLAALATGLATPNIFVLWLTIVPLTFVLSLIVVYGNRWPQISFA
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
TLFMMVMTLEEKFTPLEAFINAGWILAGGLWYTYWATLVSQWQARRIEQQALAESLFACA
HHHHHHHHHHHHCCHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DYLLARAQFYDLDADLDECYRNLVAKQITAVETQETARDIVLRNLPKLRRGKLDPGRTTM
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHE
YNLFINSVDLHELFVGAHTDYPLVRNTFGGSDLIIFYRDLIRKAAADLEEIGLAVLENRA
EHHHHCCCCHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
PHSRVSVKAELRAIEYEIELMRKKNFPATNAEAYAAVLATFRRIWSATRLIDRMRRNLSG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HADPQQTELKIDKALTRFLQRRRMSPLLIFSNLNMRSPSFRHALRVTIAVAVGFWLGRLL
CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
PLTNAYWIVMTTIIILKPGYSLTKQRNAQRIIGTLIGCAASIALIYTVKEPHLLIAIMFG
HHCCHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHH
SMVMSYSLLLFNYAASVVFTSSYVLLMFHLLAPGSMRIIGERAIDTVVGCMIAIAASRLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHC
PYWEYRLMGKQVADMLTATRKYFEAVWRAGRGMSPPPVPAADGAAVVPVIAAAIETPATT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
LDDDYRYRLARKDVHIAFANLGQAFQRMMIEPKAHQRFVPELNDLLVQTHVLGAQITAAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH
PLIRTACAADGSILHDDALHRGLAAVLDNLEKAEAGEPPPADQLDASKQITRDLDAMVVS
HHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHEEE
AEKSDAVGAELTHDLKVLAHQCKQMLASSLLIRKDASVIRLPA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]