| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065770
Identifier: 78065770
GI number: 78065770
Start: 1238040
End: 1239539
Strand: Reverse
Name: 78065770
Synonym: Bcep18194_A4298
Alternate gene names: NA
Gene position: 1239539-1238040 (Counterclockwise)
Preceding gene: 219380070
Following gene: 78065753
Centisome position: 33.55
GC content: 69.27
Gene sequence:
>1500_bases ATGTCAATCACCGAACACCTGCCCCGCACCGCATTGCTCGACAAGCTGTGGGCCCGGATGAACGAACGGGGCGATTTCCC GTTGCTGTCGGAATCGCTGCGCGCGACGATGGCCGCGATGAAGAACGACGACCTCGACTTCACCGCGCTCGTGCGCGTCG TGCTGTCGGACTTCGCGCTCACGCAGAAAGTGCTGCGGCTCGCGAACTCCGCGATGTACATGGCGTTCGGCGGCAACATC ACGACCGTGACCCGCGCCTTGATGGTGCTCGGCATGGACGCCGTCGGCCATCTGGTCGTCGGGCTCAAGCTCGTCGACCA TTTCCACCACAGTACGCCGCGACGCATCGACGCGAAGCTCGAACTGAACCGCGCGCTGCTGTCCGGCTGCGTCGCGCGCA AGCTCACCGAACGCGCCGAACTGCGCGCGGGCGAGGAAGCCGTCGTCTGCACGCTGATGCGCCAGGTCGGCAAGCTGCTC GTGGTCTGCTATCTCGACAGCGAATGGGACCGGATCCGCCGCCGCGCGGCCGAGCTGAACGGCGACGAAGCAGCCGCCTG CATCGATGTGCTCGGTGTCGGCTTCGACGAGATCGGGCTCGAGGCGGCCGCGCGCTGGCGCTTGCCCGACGTGATCCGCG CGGGGATGGCCGACCACGACCACGTGGTCCACGCCGACGCGTTCGGCAACGATGACGACGACCACGATGCGGGCCATGCG TCCGATGACGGCCCGGCCGCCCGCGTCCGCTGGCTGCGCACGATCAGCCGCTGCTCGACCGACGTCGCGGGCGCGCTCGT GATGCCCGCGAGCCCGCAGCGCGACGCGCGCATCGCGGCGCTCGCGCAGCACTACGGCGTGGAACTCGACATGGAATCCG ACGCGCTCGTCGAGATCGCCGAGCGGCTCGCGCGCGAGGAAGCAAGCGACACCGTGATGCGCGAGATCGTCGAGCTGCGC GCGAACGCCGATGCGATCGCGCGCGCGCAGGCCGAGCCCGAGGCGTGCCTCGAAGCCGGCCTCGCGGATCTGCGCGCGCT GCCGTCCGAGCACGTGCTGACACCGGTGCTCGCACTCGCGTCGGAAAGCCTGCTGGCCGGCCTCGCGTTCACGCGCACCG TGATGTTCGTGCGCCACGACGACGGCATGTTCGCCGCGCGCCTCGGCTTCGGCCCCGGCGTCGATACGACGCTCTACCGG CTGCGCTTCGACGAGCGCTTCGAGCCGGACGTGTTTCATCTCGCGATCTCGAACTCGGTCGGCATCTTCATCGAGCAGGC GCAGGAGCCGAAGATGCTCAAGCGCCTGCCCGCGTGGTATCTCGACGCATTCGACGACACGCGCGCGTTCGTGCTGCTGC CCGTGCGCGTCGGCACGACGACCGTCGCGCTGCTGTACGGCGACTGGGCCGGCGCACAGCCCGCGCGCAAGATCACGCAG CAGGAGATGGCCGTGCTCAACGAGCTCGCGCGCGAACTGGGCCGGTTCTTTCCGGCCTGA
Upstream 100 bases:
>100_bases CCAGGCGCTGCCGTCCGAGGAGCTCGCGCGGCGCTTCGAGGCGCAGCAACTGCACCTGCACGCCGCCGCCTGACGCGCGC GGCGAACCGGACAGATCCGT
Downstream 100 bases:
>100_bases CCCGGCCGCCGGGCGCGGCCGCACCGCTTCCCGTCCTTTCCCGCCCCCAAAAACAAACCGGCCGCATCAGCGGCCGGTTT GCTTGCATCGTGCGATCGAA
Product: putative signal transduction protein
Products: NA
Alternate protein names: Serine/Threonine Protein Kinase; Protein KinaseGAF; Metal Dependent Phosphohydrolase; GAF-Domain-Containing Protein; HDIG Domain Protein; HDOD Domain Family
Number of amino acids: Translated: 499; Mature: 498
Protein sequence:
>499_residues MSITEHLPRTALLDKLWARMNERGDFPLLSESLRATMAAMKNDDLDFTALVRVVLSDFALTQKVLRLANSAMYMAFGGNI TTVTRALMVLGMDAVGHLVVGLKLVDHFHHSTPRRIDAKLELNRALLSGCVARKLTERAELRAGEEAVVCTLMRQVGKLL VVCYLDSEWDRIRRRAAELNGDEAAACIDVLGVGFDEIGLEAAARWRLPDVIRAGMADHDHVVHADAFGNDDDDHDAGHA SDDGPAARVRWLRTISRCSTDVAGALVMPASPQRDARIAALAQHYGVELDMESDALVEIAERLAREEASDTVMREIVELR ANADAIARAQAEPEACLEAGLADLRALPSEHVLTPVLALASESLLAGLAFTRTVMFVRHDDGMFAARLGFGPGVDTTLYR LRFDERFEPDVFHLAISNSVGIFIEQAQEPKMLKRLPAWYLDAFDDTRAFVLLPVRVGTTTVALLYGDWAGAQPARKITQ QEMAVLNELARELGRFFPA
Sequences:
>Translated_499_residues MSITEHLPRTALLDKLWARMNERGDFPLLSESLRATMAAMKNDDLDFTALVRVVLSDFALTQKVLRLANSAMYMAFGGNI TTVTRALMVLGMDAVGHLVVGLKLVDHFHHSTPRRIDAKLELNRALLSGCVARKLTERAELRAGEEAVVCTLMRQVGKLL VVCYLDSEWDRIRRRAAELNGDEAAACIDVLGVGFDEIGLEAAARWRLPDVIRAGMADHDHVVHADAFGNDDDDHDAGHA SDDGPAARVRWLRTISRCSTDVAGALVMPASPQRDARIAALAQHYGVELDMESDALVEIAERLAREEASDTVMREIVELR ANADAIARAQAEPEACLEAGLADLRALPSEHVLTPVLALASESLLAGLAFTRTVMFVRHDDGMFAARLGFGPGVDTTLYR LRFDERFEPDVFHLAISNSVGIFIEQAQEPKMLKRLPAWYLDAFDDTRAFVLLPVRVGTTTVALLYGDWAGAQPARKITQ QEMAVLNELARELGRFFPA >Mature_498_residues SITEHLPRTALLDKLWARMNERGDFPLLSESLRATMAAMKNDDLDFTALVRVVLSDFALTQKVLRLANSAMYMAFGGNIT TVTRALMVLGMDAVGHLVVGLKLVDHFHHSTPRRIDAKLELNRALLSGCVARKLTERAELRAGEEAVVCTLMRQVGKLLV VCYLDSEWDRIRRRAAELNGDEAAACIDVLGVGFDEIGLEAAARWRLPDVIRAGMADHDHVVHADAFGNDDDDHDAGHAS DDGPAARVRWLRTISRCSTDVAGALVMPASPQRDARIAALAQHYGVELDMESDALVEIAERLAREEASDTVMREIVELRA NADAIARAQAEPEACLEAGLADLRALPSEHVLTPVLALASESLLAGLAFTRTVMFVRHDDGMFAARLGFGPGVDTTLYRL RFDERFEPDVFHLAISNSVGIFIEQAQEPKMLKRLPAWYLDAFDDTRAFVLLPVRVGTTTVALLYGDWAGAQPARKITQQ EMAVLNELARELGRFFPA
Specific function: Unknown
COG id: COG1639
COG function: function code T; Predicted signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54930; Mature: 54798
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITEHLPRTALLDKLWARMNERGDFPLLSESLRATMAAMKNDDLDFTALVRVVLSDFAL CCCHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH TQKVLRLANSAMYMAFGGNITTVTRALMVLGMDAVGHLVVGLKLVDHFHHSTPRRIDAKL HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH ELNRALLSGCVARKLTERAELRAGEEAVVCTLMRQVGKLLVVCYLDSEWDRIRRRAAELN HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHCC GDEAAACIDVLGVGFDEIGLEAAARWRLPDVIRAGMADHDHVVHADAFGNDDDDHDAGHA CCHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCC SDDGPAARVRWLRTISRCSTDVAGALVMPASPQRDARIAALAQHYGVELDMESDALVEIA CCCCHHHHHHHHHHHHHHCHHHCCEEEECCCCCCHHHHHHHHHHHCCEEECCCHHHHHHH ERLAREEASDTVMREIVELRANADAIARAQAEPEACLEAGLADLRALPSEHVLTPVLALA HHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH SESLLAGLAFTRTVMFVRHDDGMFAARLGFGPGVDTTLYRLRFDERFEPDVFHLAISNSV HHHHHHHHHHHHEEEEEEECCCCEEEECCCCCCCCHHEEEEECCCCCCCCEEEEEECCCC GIFIEQAQEPKMLKRLPAWYLDAFDDTRAFVLLPVRVGTTTVALLYGDWAGAQPARKITQ EEEEECCCCCHHHHHCCHHHHHCCCCCCEEEEEEEEECCEEEEEEECCCCCCCHHHHHHH QEMAVLNELARELGRFFPA HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SITEHLPRTALLDKLWARMNERGDFPLLSESLRATMAAMKNDDLDFTALVRVVLSDFAL CCHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH TQKVLRLANSAMYMAFGGNITTVTRALMVLGMDAVGHLVVGLKLVDHFHHSTPRRIDAKL HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH ELNRALLSGCVARKLTERAELRAGEEAVVCTLMRQVGKLLVVCYLDSEWDRIRRRAAELN HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHCC GDEAAACIDVLGVGFDEIGLEAAARWRLPDVIRAGMADHDHVVHADAFGNDDDDHDAGHA CCHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCC SDDGPAARVRWLRTISRCSTDVAGALVMPASPQRDARIAALAQHYGVELDMESDALVEIA CCCCHHHHHHHHHHHHHHCHHHCCEEEECCCCCCHHHHHHHHHHHCCEEECCCHHHHHHH ERLAREEASDTVMREIVELRANADAIARAQAEPEACLEAGLADLRALPSEHVLTPVLALA HHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH SESLLAGLAFTRTVMFVRHDDGMFAARLGFGPGVDTTLYRLRFDERFEPDVFHLAISNSV HHHHHHHHHHHHEEEEEEECCCCEEEECCCCCCCCHHEEEEECCCCCCCCEEEEEECCCC GIFIEQAQEPKMLKRLPAWYLDAFDDTRAFVLLPVRVGTTTVALLYGDWAGAQPARKITQ EEEEECCCCCHHHHHCCHHHHHCCCCCCEEEEEEEEECCEEEEEEECCCCCCCHHHHHHH QEMAVLNELARELGRFFPA HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA