| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is yhbW [H]
Identifier: 78065753
GI number: 78065753
Start: 1217941
End: 1218939
Strand: Reverse
Name: yhbW [H]
Synonym: Bcep18194_A4281
Alternate gene names: 78065753
Gene position: 1218939-1217941 (Counterclockwise)
Preceding gene: 78065770
Following gene: 78065751
Centisome position: 33.0
GC content: 69.47
Gene sequence:
>999_bases ATGACTCCGTTTTCCGTACTCGATCTCGCCCCCATTCCGGCCGGCGCTGACGCCTCCCAGGCATTCCGCAACACCGTCGA TCTCGCGCAGCATGCGGAACGTTGGGGTTACCAGCGCTACTGGCTCGCCGAGCATCACAACATGCCCGGCATCGCGAGCG CGGCAACGGCCGTCGTGATCGGCCACGTCGCGGGCGCCACGCAGACGATCCGGGTCGGTTCGGGCGGCATCATGCTGCCG AACCACGCGCCGCTCGTGATCGCCGAACAGTTCGGCACGCTTGCGTCGCTGTACCCGGGGCGCATCGACCTCGGCCTCGG CCGTGCGCCCGGCACCGACCAGACCACGTCGCGCGCGCTGCGCCGCGACCTGATCGGCAGTGCCGACTCGTTTCCAGATG ATGTCGCCGAGCTGCAGCGCTACTTCGCGGAGCCGGTGCCCGGCCAGCGCGTGCGCGCGGTGCCCGGCGCAGGGCTCGAC GTGCCCGTGTGGCTGCTCGGCTCGAGCCTGTTCAGCGCCCAGCTCGCCGCGATGCTCGGGTTGCCGTTCGCGTTCGCGTC GCACTTCGCGCCGGATTACCTGATGCGCGCGCTCGAGATCTATCGAGCACAGTACCGGCCGTCGGCCGCGTGGCCGAAGC CGCATGCGATGGTCGGCGTCAACGTGTTCGTCGCCGATACCGACGACGACGCGCGGCGCCTGTTCACGTCGCTGCAGCAG CAGTTCATCAATCTGCGGCGCGGCACGCCGGGCAAGCTGCCGCCGCCGGTCGACGTGCTCGAGGCGAACGAGCTCGAACT CGCGACGGTTGCGCATTCGCTGTCGTTCGCGGCGGTCGGCTCGCGCGACACGGTGCGCGACAAGCTGCGCGACCGCATCG CGCAGACGGGGGCCGACGAGCTGATCGTCACCGCACAGATCTACGATCACGCGGCACGGCTGCGCTCGTTCGAATTGACT GCGCAGATCCGCGACGAGCTCGCGAGCGAAACGCGCTGA
Upstream 100 bases:
>100_bases GTATCGAGCCGCCCCCAGCACGATCCGGAGCCCTTTGGCAAAATCCTTGGCATTTGTTGCGTAAGTGCATCACCCTGCTA CCCCGTTCGAAGGCCAACCG
Downstream 100 bases:
>100_bases CGGCGCGCGCCCGGGCCGCCTGCGGCCGGCCCCGCATCACTGCGGGTGCACGGCCTCCAGCCCGTCGAGCAGCGCCTTGT GGAACGCGTCCGGGTCCTGG
Product: flavin-dependent oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MTPFSVLDLAPIPAGADASQAFRNTVDLAQHAERWGYQRYWLAEHHNMPGIASAATAVVIGHVAGATQTIRVGSGGIMLP NHAPLVIAEQFGTLASLYPGRIDLGLGRAPGTDQTTSRALRRDLIGSADSFPDDVAELQRYFAEPVPGQRVRAVPGAGLD VPVWLLGSSLFSAQLAAMLGLPFAFASHFAPDYLMRALEIYRAQYRPSAAWPKPHAMVGVNVFVADTDDDARRLFTSLQQ QFINLRRGTPGKLPPPVDVLEANELELATVAHSLSFAAVGSRDTVRDKLRDRIAQTGADELIVTAQIYDHAARLRSFELT AQIRDELASETR
Sequences:
>Translated_332_residues MTPFSVLDLAPIPAGADASQAFRNTVDLAQHAERWGYQRYWLAEHHNMPGIASAATAVVIGHVAGATQTIRVGSGGIMLP NHAPLVIAEQFGTLASLYPGRIDLGLGRAPGTDQTTSRALRRDLIGSADSFPDDVAELQRYFAEPVPGQRVRAVPGAGLD VPVWLLGSSLFSAQLAAMLGLPFAFASHFAPDYLMRALEIYRAQYRPSAAWPKPHAMVGVNVFVADTDDDARRLFTSLQQ QFINLRRGTPGKLPPPVDVLEANELELATVAHSLSFAAVGSRDTVRDKLRDRIAQTGADELIVTAQIYDHAARLRSFELT AQIRDELASETR >Mature_331_residues TPFSVLDLAPIPAGADASQAFRNTVDLAQHAERWGYQRYWLAEHHNMPGIASAATAVVIGHVAGATQTIRVGSGGIMLPN HAPLVIAEQFGTLASLYPGRIDLGLGRAPGTDQTTSRALRRDLIGSADSFPDDVAELQRYFAEPVPGQRVRAVPGAGLDV PVWLLGSSLFSAQLAAMLGLPFAFASHFAPDYLMRALEIYRAQYRPSAAWPKPHAMVGVNVFVADTDDDARRLFTSLQQQ FINLRRGTPGKLPPPVDVLEANELELATVAHSLSFAAVGSRDTVRDKLRDRIAQTGADELIVTAQIYDHAARLRSFELTA QIRDELASETR
Specific function: Unknown
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]
Homologues:
Organism=Escherichia coli, GI1789551, Length=326, Percent_Identity=58.8957055214724, Blast_Score=389, Evalue=1e-109,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR019949 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 35985; Mature: 35854
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPFSVLDLAPIPAGADASQAFRNTVDLAQHAERWGYQRYWLAEHHNMPGIASAATAVVI CCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCCCHHHHHHHHHH GHVAGATQTIRVGSGGIMLPNHAPLVIAEQFGTLASLYPGRIDLGLGRAPGTDQTTSRAL HHHCCCCEEEEECCCCEECCCCCCEEEHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHH RRDLIGSADSFPDDVAELQRYFAEPVPGQRVRAVPGAGLDVPVWLLGSSLFSAQLAAMLG HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHC LPFAFASHFAPDYLMRALEIYRAQYRPSAAWPKPHAMVGVNVFVADTDDDARRLFTSLQQ CHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHH QFINLRRGTPGKLPPPVDVLEANELELATVAHSLSFAAVGSRDTVRDKLRDRIAQTGADE HHHHHHCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC LIVTAQIYDHAARLRSFELTAQIRDELASETR EEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TPFSVLDLAPIPAGADASQAFRNTVDLAQHAERWGYQRYWLAEHHNMPGIASAATAVVI CCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCCCHHHHHHHHHH GHVAGATQTIRVGSGGIMLPNHAPLVIAEQFGTLASLYPGRIDLGLGRAPGTDQTTSRAL HHHCCCCEEEEECCCCEECCCCCCEEEHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHH RRDLIGSADSFPDDVAELQRYFAEPVPGQRVRAVPGAGLDVPVWLLGSSLFSAQLAAMLG HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHC LPFAFASHFAPDYLMRALEIYRAQYRPSAAWPKPHAMVGVNVFVADTDDDARRLFTSLQQ CHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHH QFINLRRGTPGKLPPPVDVLEANELELATVAHSLSFAAVGSRDTVRDKLRDRIAQTGADE HHHHHHCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC LIVTAQIYDHAARLRSFELTAQIRDELASETR EEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]