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The map label for this gene is yfdZ [C]

Identifier: 78065527

GI number: 78065527

Start: 978572

End: 979816

Strand: Reverse

Name: yfdZ [C]

Synonym: Bcep18194_A4055

Alternate gene names: 78065527

Gene position: 979816-978572 (Counterclockwise)

Preceding gene: 78065528

Following gene: 78065525

Centisome position: 26.52

GC content: 69.32

Gene sequence:

>1245_bases
ATGCGCCCGTTTTTTCTTTTGCCTCGCCTCCCTCGCCCTGCCCGCCCGATGAATACCGCCACCGATTCGCTCGTCAGACT
CGCCGCACGTGTCGACGCGATCCAGCCCTTCTACGTGATGGAATTGATGAAGGAGGCACAGCGTCTCGAGTCCTCCGGGC
GCGATGTTATCCACATGGGCATCGGCGAGCCGGATTTCACCGCGCCGGAGCCGGTCGTCGAAGCGGCCGCGGCTGCACTG
CGCCGCGGCGTCACCCAATATACGAGCGCGCTCGGCATTGCGCCGCTGCGCGAGGCGATCGCCGCGCACTACGCGCGCGC
GTACGGCCTCACGATCAGTCCGGAACGGATCGTCGTGACGGCCGGCGCGTCTGCCGCGCTGCTGCTCGCGTGCCTCGCGC
TCGTCGGGCGTGACGACGAGGTGCTGATGCCCGACCCGTCGTATCCGTGCAACCGGCACTTCGTCGCGGCGGCCGAAGGC
CGTGCGGTGCTCGTGCCGAGCGGCCCGGACGCGCGCTTCCAGCTCACCGAGGATGACGTCCGTACGCGCTGGGGCGACCG
CACGCGCGGCGTGCTGCTCGCGTCGCCGTCGAACCCGACCGGCACGTCGCTCGAACCCGACGAACTGAAACGGATCGTCG
AAGCCGTGCGCGCACGCGGCGGCTTCACGATCGTCGACGAGATCTACCAGGGGCTCAGCTACGACGCGGCGCCCGTGTCG
GCGCTGTCGTTCGGCGACGACGTCGTCACCGTGAACAGCTTCTCCAAGTATTTCAGCATGACGGGCTGGCGGCTCGGCTG
GCTGGTCGTGCCGCCCGCGCTGGTCGGCACGTTCGAGAAGCTGGCGCAGAACCTGTTCATCTGCCCGTCCGCGCTCGCGC
AGCACGCGGCGCTCGCGTGCTTCGAGCCGGCCGCGCTCGATATCTACGAAGCGCGCCGCCTCGAATTCAAGCGCCGCCGC
GACTTCATCGCACCGGCGCTCGAGCGGCTCGGCTTCACGGTGCCCGTGATGCCGGACGGCGCGTTCTATGTCTATGCGCA
CTGCGGCGGCGTCGCCCACCCGGCAGCCGGCGACAGCGCCGCACTCACGACGGCGATGCTGCACGACGCGGGCGTCGTGC
TGGTGCCCGGCATGGACTTCGGCGTCCATGCGCCACGCGACTATATCCGCCTGTCCTATGCGACCGCCTACTCGCGGCTC
GAGGAAGCGGTCGACCGACTCGCGACGCTGTTCGGGCAGCACTGA

Upstream 100 bases:

>100_bases
TACGTGAACGGCGTGCTCGACAAGCTCGCCGCGAAGCTGCGCCCCGCCGAAACGCAGGCGCGCCGCAACGGCTGAACCCG
TTGGTCCGGAACGGGCGCGC

Downstream 100 bases:

>100_bases
CACGCGGCGGTGCGGCGGCCATTCCGCGTACCGTAAAAACAAAAAGGCACCCGGATCGGGTGCCTTTTTCCTTTCCTGCC
TGCCGGAGCGATGCGTAAGT

Product: aminotransferase

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MRPFFLLPRLPRPARPMNTATDSLVRLAARVDAIQPFYVMELMKEAQRLESSGRDVIHMGIGEPDFTAPEPVVEAAAAAL
RRGVTQYTSALGIAPLREAIAAHYARAYGLTISPERIVVTAGASAALLLACLALVGRDDEVLMPDPSYPCNRHFVAAAEG
RAVLVPSGPDARFQLTEDDVRTRWGDRTRGVLLASPSNPTGTSLEPDELKRIVEAVRARGGFTIVDEIYQGLSYDAAPVS
ALSFGDDVVTVNSFSKYFSMTGWRLGWLVVPPALVGTFEKLAQNLFICPSALAQHAALACFEPAALDIYEARRLEFKRRR
DFIAPALERLGFTVPVMPDGAFYVYAHCGGVAHPAAGDSAALTTAMLHDAGVVLVPGMDFGVHAPRDYIRLSYATAYSRL
EEAVDRLATLFGQH

Sequences:

>Translated_414_residues
MRPFFLLPRLPRPARPMNTATDSLVRLAARVDAIQPFYVMELMKEAQRLESSGRDVIHMGIGEPDFTAPEPVVEAAAAAL
RRGVTQYTSALGIAPLREAIAAHYARAYGLTISPERIVVTAGASAALLLACLALVGRDDEVLMPDPSYPCNRHFVAAAEG
RAVLVPSGPDARFQLTEDDVRTRWGDRTRGVLLASPSNPTGTSLEPDELKRIVEAVRARGGFTIVDEIYQGLSYDAAPVS
ALSFGDDVVTVNSFSKYFSMTGWRLGWLVVPPALVGTFEKLAQNLFICPSALAQHAALACFEPAALDIYEARRLEFKRRR
DFIAPALERLGFTVPVMPDGAFYVYAHCGGVAHPAAGDSAALTTAMLHDAGVVLVPGMDFGVHAPRDYIRLSYATAYSRL
EEAVDRLATLFGQH
>Mature_414_residues
MRPFFLLPRLPRPARPMNTATDSLVRLAARVDAIQPFYVMELMKEAQRLESSGRDVIHMGIGEPDFTAPEPVVEAAAAAL
RRGVTQYTSALGIAPLREAIAAHYARAYGLTISPERIVVTAGASAALLLACLALVGRDDEVLMPDPSYPCNRHFVAAAEG
RAVLVPSGPDARFQLTEDDVRTRWGDRTRGVLLASPSNPTGTSLEPDELKRIVEAVRARGGFTIVDEIYQGLSYDAAPVS
ALSFGDDVVTVNSFSKYFSMTGWRLGWLVVPPALVGTFEKLAQNLFICPSALAQHAALACFEPAALDIYEARRLEFKRRR
DFIAPALERLGFTVPVMPDGAFYVYAHCGGVAHPAAGDSAALTTAMLHDAGVVLVPGMDFGVHAPRDYIRLSYATAYSRL
EEAVDRLATLFGQH

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI95147551, Length=417, Percent_Identity=27.0983213429257, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI169881279, Length=417, Percent_Identity=27.0983213429257, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI56713256, Length=316, Percent_Identity=27.5316455696203, Blast_Score=122, Evalue=7e-28,
Organism=Homo sapiens, GI56713254, Length=344, Percent_Identity=26.7441860465116, Blast_Score=122, Evalue=8e-28,
Organism=Homo sapiens, GI169881281, Length=415, Percent_Identity=22.4096385542169, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI4507369, Length=381, Percent_Identity=23.0971128608924, Blast_Score=85, Evalue=1e-16,
Organism=Escherichia coli, GI1788722, Length=400, Percent_Identity=29.5, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1788627, Length=389, Percent_Identity=28.0205655526992, Blast_Score=128, Evalue=7e-31,
Organism=Escherichia coli, GI1786816, Length=368, Percent_Identity=29.3478260869565, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1787710, Length=187, Percent_Identity=31.5508021390374, Blast_Score=67, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71994472, Length=394, Percent_Identity=27.1573604060914, Blast_Score=121, Evalue=9e-28,
Organism=Caenorhabditis elegans, GI71994476, Length=394, Percent_Identity=27.1573604060914, Blast_Score=120, Evalue=9e-28,
Organism=Caenorhabditis elegans, GI17567369, Length=319, Percent_Identity=26.0188087774295, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17567663, Length=384, Percent_Identity=24.7395833333333, Blast_Score=108, Evalue=4e-24,
Organism=Saccharomyces cerevisiae, GI6322401, Length=392, Percent_Identity=23.9795918367347, Blast_Score=112, Evalue=2e-25,
Organism=Drosophila melanogaster, GI28573069, Length=385, Percent_Identity=27.5324675324675, Blast_Score=135, Evalue=5e-32,
Organism=Drosophila melanogaster, GI24646114, Length=385, Percent_Identity=27.5324675324675, Blast_Score=135, Evalue=5e-32,
Organism=Drosophila melanogaster, GI28573067, Length=385, Percent_Identity=27.5324675324675, Blast_Score=135, Evalue=5e-32,
Organism=Drosophila melanogaster, GI28573065, Length=385, Percent_Identity=27.5324675324675, Blast_Score=135, Evalue=5e-32,
Organism=Drosophila melanogaster, GI18859735, Length=386, Percent_Identity=24.6113989637306, Blast_Score=88, Evalue=9e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 44872; Mature: 44872

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPFFLLPRLPRPARPMNTATDSLVRLAARVDAIQPFYVMELMKEAQRLESSGRDVIHMG
CCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEC
IGEPDFTAPEPVVEAAAAALRRGVTQYTSALGIAPLREAIAAHYARAYGLTISPERIVVT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCEECCCEEEEE
AGASAALLLACLALVGRDDEVLMPDPSYPCNRHFVAAAEGRAVLVPSGPDARFQLTEDDV
CCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCEEEECCCCEEEEECCCCCEEEECHHHH
RTRWGDRTRGVLLASPSNPTGTSLEPDELKRIVEAVRARGGFTIVDEIYQGLSYDAAPVS
HHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHCCCCCCCCCH
ALSFGDDVVTVNSFSKYFSMTGWRLGWLVVPPALVGTFEKLAQNLFICPSALAQHAALAC
HHCCCCCEEEHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
FEPAALDIYEARRLEFKRRRDFIAPALERLGFTVPVMPDGAFYVYAHCGGVAHPAAGDSA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEECCCCCCCCCCCHH
ALTTAMLHDAGVVLVPGMDFGVHAPRDYIRLSYATAYSRLEEAVDRLATLFGQH
HHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRPFFLLPRLPRPARPMNTATDSLVRLAARVDAIQPFYVMELMKEAQRLESSGRDVIHMG
CCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEC
IGEPDFTAPEPVVEAAAAALRRGVTQYTSALGIAPLREAIAAHYARAYGLTISPERIVVT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCEECCCEEEEE
AGASAALLLACLALVGRDDEVLMPDPSYPCNRHFVAAAEGRAVLVPSGPDARFQLTEDDV
CCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCEEEECCCCEEEEECCCCCEEEECHHHH
RTRWGDRTRGVLLASPSNPTGTSLEPDELKRIVEAVRARGGFTIVDEIYQGLSYDAAPVS
HHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHCCCCCCCCCH
ALSFGDDVVTVNSFSKYFSMTGWRLGWLVVPPALVGTFEKLAQNLFICPSALAQHAALAC
HHCCCCCEEEHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
FEPAALDIYEARRLEFKRRRDFIAPALERLGFTVPVMPDGAFYVYAHCGGVAHPAAGDSA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEECCCCCCCCCCCHH
ALTTAMLHDAGVVLVPGMDFGVHAPRDYIRLSYATAYSRLEEAVDRLATLFGQH
HHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]