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The map label for this gene is ubiD [H]

Identifier: 78065525

GI number: 78065525

Start: 975207

End: 976763

Strand: Reverse

Name: ubiD [H]

Synonym: Bcep18194_A4053

Alternate gene names: 78065525

Gene position: 976763-975207 (Counterclockwise)

Preceding gene: 78065527

Following gene: 78065524

Centisome position: 26.44

GC content: 68.14

Gene sequence:

>1557_bases
ATGAAATACAAAGACTTACGCGATTTCATCCAGCGCCTCGAGGCGCTCGGCGAACTGCGGCGCGTCACGCAGCCCGTGTC
GCCCGTGCTCGAAATGACCGAGCTGTGCGACCGCGTGCTGCGCGCCGGCGGCCCTGCGCTGCTGTTCAACGCACCGACTG
GCTACGACTTCCCGGTGCTGGGCAACCTGTTCGGCACGCCGCGCCGCGTCGCGCTCGGCATGGGCGTCGATGCGGGCGAC
GACGCCGCGCTCGATTCGCTGCGCGATCTCGGGCGCCTGCTGTCCGCGCTGAAGGAACCCGATCCGCCGAAGAGCCTGAA
GGACGCCGGCAAGCTGCTGTCGCTCGCGAAGGCCGTGTGGGACATGGCGCCGAAGTCGGTATCGTCGCCACCGTGCCAGG
AGATCGTCTGGGAAGGCGCCGACGTCGACCTGAACCGGCTGCCGATCCAGACCTGCTGGCCCGGCGACGCAGGGCCGCTC
GTCACGTGGGGCCTGACGGTCACGCGCGGGCCGAACAAGTCGCGGCAGAACCTCGGGATCTACCGTCAGCAGCTGATCGG
CCGCAACAAGCTGATCATGCGCTGGCTCGCGCATCGCGGCGGCGCGCTCGACTTCCGCGAATTCGCGCTGCAGAACCCCG
GCAAGCCGTATCCGGTCGCGGTCGTGCTCGGCGCCGATCCGGCCACGACGCTCGGCGCGGTGACGCCCGTGCCCGATTCG
CTGTCCGAGTACCAGTTCGCCGGCCTGCTGCGCGGCAGCCGCACGGAGCTCGCGAAGTGCCTGACGCCCGGCGTCGACAC
GCTGCAGGTGCCCGCGCGCGCGGAGATCGTGCTCGAAGGCTTCATCTATCCGCAGGAAGGCGCCCCCGCCCCTGCTCCGG
CCGGCGCACCGCCGCGCCCGGCCGGCAACGCATCGGCCAAGTACGAGCACGCGCTCGAAGGCCCGTACGGCGACCACACC
GGCTATTACAACGAGCAGGAGTGGTTCCCGGTGTTCACCGTCGAGCGCATCACGATGCGCCGCGACGCGATCTACCACTC
GACCTACACGGGCAAGCCGCCTGACGAGCCCGCGGTGCTCGGCGTCGCGCTCAACGAGGTGTTCGTGCCGCTGCTGCAGA
AGCAGTTCACCGAGATCACCGACTTCTACCTGCCGCCCGAAGGCTGTAGCTACCGGATGGCCATCGTCCAGATGAAGAAG
AGCTACGCGGGCCACGCGAAGCGCGTGATGTTCGGCGTGTGGAGCTTCCTGCGGCAGTTCATGTATACGAAGTTCATCGT
GGTCGTCGACGAGGACGTGAACATCCGCGACTGGAAGGAAGTGATCTGGGCGATCACGACGCGCGTCGACCCCGTGCGCG
ACACCGTGATGGTCGACAGCACGCCGATCGACTATCTCGACTTCGCGTCGCCGGTCGCCGGCCTCGGTTCGAAGATGGGG
CTGGACGCGACCAACAAGTGGCCCGGCGAGACCAACCGCGAATGGGGCCGCCCGATCGAGATGGATGCGGCCGTGAAGGC
GCGCGTCGACCGGCTCTGGCAGGAGATCGGTCTCTGA

Upstream 100 bases:

>100_bases
ATGCGGCGGCGCGGGTAAAATCGTCGGTCGATTCGGGGTCACAGCCAGCCGCTGTGCCCACCCATCGCTGCCCGCCTGGC
GGGTGGCCCGGACCATCTTC

Downstream 100 bases:

>100_bases
CACCATGCGGCCGGCGCCTGCCGGCCCGTGGACTGCCATCGCGACAAGAACAACGAAGATGACTTTTCCGCCCGCCTCCA
TGCTGTCCGACGGTTTTTTT

Product: 3-octaprenyl-4hydroxybenzoate decarboxylase

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: Polyprenyl p-hydroxybenzoate decarboxylase [H]

Number of amino acids: Translated: 518; Mature: 518

Protein sequence:

>518_residues
MKYKDLRDFIQRLEALGELRRVTQPVSPVLEMTELCDRVLRAGGPALLFNAPTGYDFPVLGNLFGTPRRVALGMGVDAGD
DAALDSLRDLGRLLSALKEPDPPKSLKDAGKLLSLAKAVWDMAPKSVSSPPCQEIVWEGADVDLNRLPIQTCWPGDAGPL
VTWGLTVTRGPNKSRQNLGIYRQQLIGRNKLIMRWLAHRGGALDFREFALQNPGKPYPVAVVLGADPATTLGAVTPVPDS
LSEYQFAGLLRGSRTELAKCLTPGVDTLQVPARAEIVLEGFIYPQEGAPAPAPAGAPPRPAGNASAKYEHALEGPYGDHT
GYYNEQEWFPVFTVERITMRRDAIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFTEITDFYLPPEGCSYRMAIVQMKK
SYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVNIRDWKEVIWAITTRVDPVRDTVMVDSTPIDYLDFASPVAGLGSKMG
LDATNKWPGETNREWGRPIEMDAAVKARVDRLWQEIGL

Sequences:

>Translated_518_residues
MKYKDLRDFIQRLEALGELRRVTQPVSPVLEMTELCDRVLRAGGPALLFNAPTGYDFPVLGNLFGTPRRVALGMGVDAGD
DAALDSLRDLGRLLSALKEPDPPKSLKDAGKLLSLAKAVWDMAPKSVSSPPCQEIVWEGADVDLNRLPIQTCWPGDAGPL
VTWGLTVTRGPNKSRQNLGIYRQQLIGRNKLIMRWLAHRGGALDFREFALQNPGKPYPVAVVLGADPATTLGAVTPVPDS
LSEYQFAGLLRGSRTELAKCLTPGVDTLQVPARAEIVLEGFIYPQEGAPAPAPAGAPPRPAGNASAKYEHALEGPYGDHT
GYYNEQEWFPVFTVERITMRRDAIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFTEITDFYLPPEGCSYRMAIVQMKK
SYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVNIRDWKEVIWAITTRVDPVRDTVMVDSTPIDYLDFASPVAGLGSKMG
LDATNKWPGETNREWGRPIEMDAAVKARVDRLWQEIGL
>Mature_518_residues
MKYKDLRDFIQRLEALGELRRVTQPVSPVLEMTELCDRVLRAGGPALLFNAPTGYDFPVLGNLFGTPRRVALGMGVDAGD
DAALDSLRDLGRLLSALKEPDPPKSLKDAGKLLSLAKAVWDMAPKSVSSPPCQEIVWEGADVDLNRLPIQTCWPGDAGPL
VTWGLTVTRGPNKSRQNLGIYRQQLIGRNKLIMRWLAHRGGALDFREFALQNPGKPYPVAVVLGADPATTLGAVTPVPDS
LSEYQFAGLLRGSRTELAKCLTPGVDTLQVPARAEIVLEGFIYPQEGAPAPAPAGAPPRPAGNASAKYEHALEGPYGDHT
GYYNEQEWFPVFTVERITMRRDAIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFTEITDFYLPPEGCSYRMAIVQMKK
SYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVNIRDWKEVIWAITTRVDPVRDTVMVDSTPIDYLDFASPVAGLGSKMG
LDATNKWPGETNREWGRPIEMDAAVKARVDRLWQEIGL

Specific function: Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol [H]

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=518, Percent_Identity=66.2162162162162, Blast_Score=707, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6320748, Length=467, Percent_Identity=24.1970021413276, Blast_Score=108, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: NA

Molecular weight: Translated: 57266; Mature: 57266

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: PS00024 HEMOPEXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYKDLRDFIQRLEALGELRRVTQPVSPVLEMTELCDRVLRAGGPALLFNAPTGYDFPVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHH
GNLFGTPRRVALGMGVDAGDDAALDSLRDLGRLLSALKEPDPPKSLKDAGKLLSLAKAVW
HHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
DMAPKSVSSPPCQEIVWEGADVDLNRLPIQTCWPGDAGPLVTWGLTVTRGPNKSRQNLGI
HHCCCCCCCCCHHHHHCCCCCCCCCCCCCEECCCCCCCCEEEEEEEEECCCCCCHHHHHH
YRQQLIGRNKLIMRWLAHRGGALDFREFALQNPGKPYPVAVVLGADPATTLGAVTPVPDS
HHHHHHCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCEEEEECCCCCHHHCCCCCCCCC
LSEYQFAGLLRGSRTELAKCLTPGVDTLQVPARAEIVLEGFIYPQEGAPAPAPAGAPPRP
HHHHHHHHHHCCCHHHHHHHHCCCCCCEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCC
AGNASAKYEHALEGPYGDHTGYYNEQEWFPVFTVERITMRRDAIYHSTYTGKPPDEPAVL
CCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCEE
GVALNEVFVPLLQKQFTEITDFYLPPEGCSYRMAIVQMKKSYAGHAKRVMFGVWSFLRQF
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
MYTKFIVVVDEDVNIRDWKEVIWAITTRVDPVRDTVMVDSTPIDYLDFASPVAGLGSKMG
HHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCC
LDATNKWPGETNREWGRPIEMDAAVKARVDRLWQEIGL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKYKDLRDFIQRLEALGELRRVTQPVSPVLEMTELCDRVLRAGGPALLFNAPTGYDFPVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHH
GNLFGTPRRVALGMGVDAGDDAALDSLRDLGRLLSALKEPDPPKSLKDAGKLLSLAKAVW
HHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
DMAPKSVSSPPCQEIVWEGADVDLNRLPIQTCWPGDAGPLVTWGLTVTRGPNKSRQNLGI
HHCCCCCCCCCHHHHHCCCCCCCCCCCCCEECCCCCCCCEEEEEEEEECCCCCCHHHHHH
YRQQLIGRNKLIMRWLAHRGGALDFREFALQNPGKPYPVAVVLGADPATTLGAVTPVPDS
HHHHHHCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCEEEEECCCCCHHHCCCCCCCCC
LSEYQFAGLLRGSRTELAKCLTPGVDTLQVPARAEIVLEGFIYPQEGAPAPAPAGAPPRP
HHHHHHHHHHCCCHHHHHHHHCCCCCCEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCC
AGNASAKYEHALEGPYGDHTGYYNEQEWFPVFTVERITMRRDAIYHSTYTGKPPDEPAVL
CCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCEE
GVALNEVFVPLLQKQFTEITDFYLPPEGCSYRMAIVQMKKSYAGHAKRVMFGVWSFLRQF
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
MYTKFIVVVDEDVNIRDWKEVIWAITTRVDPVRDTVMVDSTPIDYLDFASPVAGLGSKMG
HHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCC
LDATNKWPGETNREWGRPIEMDAAVKARVDRLWQEIGL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA