Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
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Accession | NC_007510 |
Length | 3,694,126 |
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The map label for this gene is 78065430
Identifier: 78065430
GI number: 78065430
Start: 879532
End: 879981
Strand: Reverse
Name: 78065430
Synonym: Bcep18194_A3956
Alternate gene names: NA
Gene position: 879981-879532 (Counterclockwise)
Preceding gene: 78065431
Following gene: 78065427
Centisome position: 23.82
GC content: 60.67
Gene sequence:
>450_bases ATGGTTCGAGCCAAATGTGTCGCGGCGGTTGTGCTGTGCGTCCCGATCGCGCTCTGCCATGCCAGAGCGGTAAGCACCGT GACCGTCGAGCAATCCGGCCAGACGTCGACCCCGAACGACCCACTGACCAGGGGCGCATGCAAGAAATTCACACCGACCG TCGCGCAACTGAAGCGGTTCTTTTCGAGAGCCGCGCCAATTGACGGCAAGTTTGTCGCGCACGATTACTACTCGCCCTGC CATTCGAACGGCACCATTTCGTTTCCGGACGGTAGCTCGGGGAGGTGGCGCGTCTACTCCAGCGGCGCCGCGTCGCTAAC ATGGACATCGAACGACACCACGGTCTATCTCTACAACGGTCGCAACAACGGCTGGCACGATCCGTTCGCGTGCAGCTACG GCCTTCACGCTGAAGACGACGATACTTCATGCTACCTGCCGGGCTTCTGA
Upstream 100 bases:
>100_bases TCCGAGACGCTGAACGTCGAGATGAGAGAGGTATATCGGCACCCGGAAGTCGGGCGCAAGAACGCCACCGAGGCAAGCAC GGCACAGTGGGAGTGACGCA
Downstream 100 bases:
>100_bases TTTCGTGCACCCGGCAAATCCATAAAAAAAGACCCGCATCGCTGCGGGTCTTTTCTTTTGGCTGGAACGCGCATCGCTGC GCGCTCCGGACACCATCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MVRAKCVAAVVLCVPIALCHARAVSTVTVEQSGQTSTPNDPLTRGACKKFTPTVAQLKRFFSRAAPIDGKFVAHDYYSPC HSNGTISFPDGSSGRWRVYSSGAASLTWTSNDTTVYLYNGRNNGWHDPFACSYGLHAEDDDTSCYLPGF
Sequences:
>Translated_149_residues MVRAKCVAAVVLCVPIALCHARAVSTVTVEQSGQTSTPNDPLTRGACKKFTPTVAQLKRFFSRAAPIDGKFVAHDYYSPC HSNGTISFPDGSSGRWRVYSSGAASLTWTSNDTTVYLYNGRNNGWHDPFACSYGLHAEDDDTSCYLPGF >Mature_149_residues MVRAKCVAAVVLCVPIALCHARAVSTVTVEQSGQTSTPNDPLTRGACKKFTPTVAQLKRFFSRAAPIDGKFVAHDYYSPC HSNGTISFPDGSSGRWRVYSSGAASLTWTSNDTTVYLYNGRNNGWHDPFACSYGLHAEDDDTSCYLPGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16164; Mature: 16164
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRAKCVAAVVLCVPIALCHARAVSTVTVEQSGQTSTPNDPLTRGACKKFTPTVAQLKRF CCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCHHHCCHHHHHHHHH FSRAAPIDGKFVAHDYYSPCHSNGTISFPDGSSGRWRVYSSGAASLTWTSNDTTVYLYNG HHHCCCCCCEEEEECCCCCCCCCCEEECCCCCCCEEEEEECCCCEEEEECCCCEEEEECC RNNGWHDPFACSYGLHAEDDDTSCYLPGF CCCCCCCCCEEECCCCCCCCCCEEECCCC >Mature Secondary Structure MVRAKCVAAVVLCVPIALCHARAVSTVTVEQSGQTSTPNDPLTRGACKKFTPTVAQLKRF CCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCHHHCCHHHHHHHHH FSRAAPIDGKFVAHDYYSPCHSNGTISFPDGSSGRWRVYSSGAASLTWTSNDTTVYLYNG HHHCCCCCCEEEEECCCCCCCCCCEEECCCCCCCEEEEEECCCCEEEEECCCCEEEEECC RNNGWHDPFACSYGLHAEDDDTSCYLPGF CCCCCCCCCEEECCCCCCCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA