Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
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Accession | NC_007510 |
Length | 3,694,126 |
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The map label for this gene is 78065431
Identifier: 78065431
GI number: 78065431
Start: 879986
End: 880600
Strand: Reverse
Name: 78065431
Synonym: Bcep18194_A3957
Alternate gene names: NA
Gene position: 880600-879986 (Counterclockwise)
Preceding gene: 78065432
Following gene: 78065430
Centisome position: 23.84
GC content: 55.12
Gene sequence:
>615_bases ATGCTTTTCATTTCAAAGCAGGGCCACGTCGATGCCGAGCGCGTGATCCTCAGAATATATTCATCCATCGAACGTGGGCC GATGGAACACGTGAACGGAATCGTCGTCCATCAAACTGGAGGCTCCACCGTCTCAAGCACCTTCAATAGCTACAGCAACT CCGCGCACGTACCAAACGGCGCCCATTTCCTGATCGACAAAGATGGGACGATCTATCAGACCGCATCCCTGAACAGAATC ACGAATCACGTCGGCAAGTTGCAGTCACGCTGCATCAGCACACTCAAGTGCTCGACCGTTGACCTACGCGCAGCAAGGCG TGCGTATCAGACCGGCCCCGCAGCGTCCCATCGCCACGAATCCAGGAAAGCGTTTCCAGACCGCTATCCATCCAACTCTG ACGCAATCGGAATCGAACTCGTTGGCATGTACTACCCCGACGAGAAAAACGCGGAACCGGTTTATGAAAGCGTCACGACC GAACAGAATTCATCGCTCAAATGGCTTGTTCGCGAATTGTCCGAGACGCTGAACGTCGAGATGAGAGAGGTATATCGGCA CCCGGAAGTCGGGCGCAAGAACGCCACCGAGGCAAGCACGGCACAGTGGGAGTGA
Upstream 100 bases:
>100_bases GGAATATGTCGTTCAGAACGCCCAAGGAGGGAGCGGCGGAACTGTCGAAGCAGGATACGACATCAAAACCGGCAAAACGA CCTGAGGATCGGAGGGAGTC
Downstream 100 bases:
>100_bases CGCAATGGTTCGAGCCAAATGTGTCGCGGCGGTTGTGCTGTGCGTCCCGATCGCGCTCTGCCATGCCAGAGCGGTAAGCA CCGTGACCGTCGAGCAATCC
Product: N-acetylmuramoyl-L-alanine amidase
Products: NA
Alternate protein names: N-Acetylmuramyl-L-Alanine Amidase
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MLFISKQGHVDAERVILRIYSSIERGPMEHVNGIVVHQTGGSTVSSTFNSYSNSAHVPNGAHFLIDKDGTIYQTASLNRI TNHVGKLQSRCISTLKCSTVDLRAARRAYQTGPAASHRHESRKAFPDRYPSNSDAIGIELVGMYYPDEKNAEPVYESVTT EQNSSLKWLVRELSETLNVEMREVYRHPEVGRKNATEASTAQWE
Sequences:
>Translated_204_residues MLFISKQGHVDAERVILRIYSSIERGPMEHVNGIVVHQTGGSTVSSTFNSYSNSAHVPNGAHFLIDKDGTIYQTASLNRI TNHVGKLQSRCISTLKCSTVDLRAARRAYQTGPAASHRHESRKAFPDRYPSNSDAIGIELVGMYYPDEKNAEPVYESVTT EQNSSLKWLVRELSETLNVEMREVYRHPEVGRKNATEASTAQWE >Mature_204_residues MLFISKQGHVDAERVILRIYSSIERGPMEHVNGIVVHQTGGSTVSSTFNSYSNSAHVPNGAHFLIDKDGTIYQTASLNRI TNHVGKLQSRCISTLKCSTVDLRAARRAYQTGPAASHRHESRKAFPDRYPSNSDAIGIELVGMYYPDEKNAEPVYESVTT EQNSSLKWLVRELSETLNVEMREVYRHPEVGRKNATEASTAQWE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22853; Mature: 22853
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFISKQGHVDAERVILRIYSSIERGPMEHVNGIVVHQTGGSTVSSTFNSYSNSAHVPNG CEEECCCCCCCHHHHHHHHHHHHHCCCHHHHCEEEEECCCCCHHHHHHHHCCCCCCCCCC AHFLIDKDGTIYQTASLNRITNHVGKLQSRCISTLKCSTVDLRAARRAYQTGPAASHRHE CEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHH SRKAFPDRYPSNSDAIGIELVGMYYPDEKNAEPVYESVTTEQNSSLKWLVRELSETLNVE HHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCHH MREVYRHPEVGRKNATEASTAQWE HHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLFISKQGHVDAERVILRIYSSIERGPMEHVNGIVVHQTGGSTVSSTFNSYSNSAHVPNG CEEECCCCCCCHHHHHHHHHHHHHCCCHHHHCEEEEECCCCCHHHHHHHHCCCCCCCCCC AHFLIDKDGTIYQTASLNRITNHVGKLQSRCISTLKCSTVDLRAARRAYQTGPAASHRHE CEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHH SRKAFPDRYPSNSDAIGIELVGMYYPDEKNAEPVYESVTTEQNSSLKWLVRELSETLNVE HHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCHH MREVYRHPEVGRKNATEASTAQWE HHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA