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The map label for this gene is oprB [H]

Identifier: 78065427

GI number: 78065427

Start: 875295

End: 876761

Strand: Reverse

Name: oprB [H]

Synonym: Bcep18194_A3953

Alternate gene names: 78065427

Gene position: 876761-875295 (Counterclockwise)

Preceding gene: 78065430

Following gene: 78065426

Centisome position: 23.73

GC content: 67.69

Gene sequence:

>1467_bases
ATGAAGTTTGCGTCGTTCCAGGGAGACAGCGTCCGTGCCCGGATGCGCCCCGCCGCCTGCGCGGCCATCCTCGCGTGCGC
GTCATTCTCGAGCGGCGCGGCGTTCGCCGACGTGCCGGTCGACGCACAGCCCGAAGCACCCGAGGCCGACCTCGCGATCC
AGGCGAAGCCGACCAACATGTGGACCGGCATCTGGACCCGCCAGAACCTGCTCGGCGACATGGGCGGCATCCGCCCGTGG
CTCGGCAAGTACGGCGCGACGCTGCAGATCACCGAAACCAGCGAATACCTTGCGAACCTGCGCGGCGGCCTGAACCGCGG
CGGCGCGTACGACGGGCTGACGACGGCGACCTTGACGGTCGACACGCAGAAGGCGATCGGCCTGCCCGGCGGCACGTTCA
ACGTCAGCGCGCTGCAGATCCACGGCACCAACCTGAGTACGCGGAACCTCGGCACGCTCAACACCGCGAGCGGCATCGAG
GCACAGGGCACGACGCGCCTGTGGGAGCTGTGGTACCAGCAGTCGTTCCTCGACAAGCGTGTCGACGTGAAGATCGGCCA
GCAGAGCCTGGACCAGGAATTCATGGTCAGCACGTATGCGAACACGTTCGTCAACACGATGTTCGGCTGGCCCGCGCTGC
CGTCGTACGACCTGCCGAACGGCGGCCCGGCGTATCCGCTCGCGGGCCTCGGCGTGCGCGTACGCGCGCAGATCACGCCG
AAGCTCACCGCACTCGCGGGCGTGTTCGACGGCGATCCGCTCGGCAACAACCCGAGCAACCTCAGCGGCACCAACTTCAA
CCTGCACAACGGTGCGCTTTATATCGGCGAACTGCAGTACGCGCTGAACCAGCCGTCCGACGGTGAAATGGACACCGGCC
GCTCGAACGGGCTGCCGGGCACCTACAAGATCGGCGTCTGGTATCACAACGGCCGCTTCGCGGACCAGAACGTGGGCACC
GACGGGCTGTCGCTCTCGGATCCCGCATCGAACGGCAACGCGCAGCAGCGGCACGGCAACTACAGCTTCTACGCGGTGGC
CGACCAGATGATCTGGCGCCCCGACCCGACCGGCCCGCGAAGCCTCGGCGTGTTCGCCCGCGTGATGGGCGCGCCGGGTG
ACCGCAACCTGGTGAGCCTGTCGGCCAATGCGGGGATCGTGCTGAAGGCGCCGTTCGAGGGCCGCGACAACGACAGCGTC
GGCCTCGGCGTCACGTACATCCAGGTCGGCAACCACGTGACCGACCTCGACCAGACCGCGCAGTCGTTCGCGACCGGCCC
GTACGGCGTACGCACCCGCGAGACGACCCTCGAAGCGACCTACCAGTACCAGGTCAACCCGTGGTGGATCGTCCAGGCCG
ACGCGCAGTACACGTTCAACGCCGGTGCCGGCCAGAACCCGAGCGACGCGACCCAGCCGCTGCGCAACACGTTCGTGATC
GGTGCACGTACGACGATCACGTTCTGA

Upstream 100 bases:

>100_bases
CCGCGTTGCGTTCATCTTCATGCCCTGGCCAAACGGTGCCGAGCGTCCGGACAGCGACCGACAAGCAGGACTCCACACTA
ATTAGAACCAGGGATTTGAT

Downstream 100 bases:

>100_bases
GCGGACGCGCCCACGCTGACCCTTTTCGCGCGCCGCCCGGACGGCGCGCTCCCCAGGAGACCCACATGAATCCATCCGCT
CCGCTTCGCCGCCTCGCGAC

Product: carbohydrate-selective porin OprB

Products: NA

Alternate protein names: Glucose porin; Outer membrane protein D1 [H]

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MKFASFQGDSVRARMRPAACAAILACASFSSGAAFADVPVDAQPEAPEADLAIQAKPTNMWTGIWTRQNLLGDMGGIRPW
LGKYGATLQITETSEYLANLRGGLNRGGAYDGLTTATLTVDTQKAIGLPGGTFNVSALQIHGTNLSTRNLGTLNTASGIE
AQGTTRLWELWYQQSFLDKRVDVKIGQQSLDQEFMVSTYANTFVNTMFGWPALPSYDLPNGGPAYPLAGLGVRVRAQITP
KLTALAGVFDGDPLGNNPSNLSGTNFNLHNGALYIGELQYALNQPSDGEMDTGRSNGLPGTYKIGVWYHNGRFADQNVGT
DGLSLSDPASNGNAQQRHGNYSFYAVADQMIWRPDPTGPRSLGVFARVMGAPGDRNLVSLSANAGIVLKAPFEGRDNDSV
GLGVTYIQVGNHVTDLDQTAQSFATGPYGVRTRETTLEATYQYQVNPWWIVQADAQYTFNAGAGQNPSDATQPLRNTFVI
GARTTITF

Sequences:

>Translated_488_residues
MKFASFQGDSVRARMRPAACAAILACASFSSGAAFADVPVDAQPEAPEADLAIQAKPTNMWTGIWTRQNLLGDMGGIRPW
LGKYGATLQITETSEYLANLRGGLNRGGAYDGLTTATLTVDTQKAIGLPGGTFNVSALQIHGTNLSTRNLGTLNTASGIE
AQGTTRLWELWYQQSFLDKRVDVKIGQQSLDQEFMVSTYANTFVNTMFGWPALPSYDLPNGGPAYPLAGLGVRVRAQITP
KLTALAGVFDGDPLGNNPSNLSGTNFNLHNGALYIGELQYALNQPSDGEMDTGRSNGLPGTYKIGVWYHNGRFADQNVGT
DGLSLSDPASNGNAQQRHGNYSFYAVADQMIWRPDPTGPRSLGVFARVMGAPGDRNLVSLSANAGIVLKAPFEGRDNDSV
GLGVTYIQVGNHVTDLDQTAQSFATGPYGVRTRETTLEATYQYQVNPWWIVQADAQYTFNAGAGQNPSDATQPLRNTFVI
GARTTITF
>Mature_488_residues
MKFASFQGDSVRARMRPAACAAILACASFSSGAAFADVPVDAQPEAPEADLAIQAKPTNMWTGIWTRQNLLGDMGGIRPW
LGKYGATLQITETSEYLANLRGGLNRGGAYDGLTTATLTVDTQKAIGLPGGTFNVSALQIHGTNLSTRNLGTLNTASGIE
AQGTTRLWELWYQQSFLDKRVDVKIGQQSLDQEFMVSTYANTFVNTMFGWPALPSYDLPNGGPAYPLAGLGVRVRAQITP
KLTALAGVFDGDPLGNNPSNLSGTNFNLHNGALYIGELQYALNQPSDGEMDTGRSNGLPGTYKIGVWYHNGRFADQNVGT
DGLSLSDPASNGNAQQRHGNYSFYAVADQMIWRPDPTGPRSLGVFARVMGAPGDRNLVSLSANAGIVLKAPFEGRDNDSV
GLGVTYIQVGNHVTDLDQTAQSFATGPYGVRTRETTLEATYQYQVNPWWIVQADAQYTFNAGAGQNPSDATQPLRNTFVI
GARTTITF

Specific function: Substrate-selective channel for a variety of different sugars. Could potentially facilitate the diffusion of diverse compounds, dependent on the presence of a hydroxyl group, but is presumably restricted to carbohydrates. Involved in the transport of gluc

COG id: COG3659

COG function: function code M; Carbohydrate-selective porin

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the oprB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049 [H]

Pfam domain/function: PF04966 OprB [H]

EC number: NA

Molecular weight: Translated: 52303; Mature: 52303

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFASFQGDSVRARMRPAACAAILACASFSSGAAFADVPVDAQPEAPEADLAIQAKPTNM
CCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCE
WTGIWTRQNLLGDMGGIRPWLGKYGATLQITETSEYLANLRGGLNRGGAYDGLTTATLTV
EEEEEEHHHHHHHHCCCCHHHHCCCCEEEEECHHHHHHHHHCCCCCCCCCCCCEEEEEEE
DTQKAIGLPGGTFNVSALQIHGTNLSTRNLGTLNTASGIEAQGTTRLWELWYQQSFLDKR
ECHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
VDVKIGQQSLDQEFMVSTYANTFVNTMFGWPALPSYDLPNGGPAYPLAGLGVRVRAQITP
CEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC
KLTALAGVFDGDPLGNNPSNLSGTNFNLHNGALYIGELQYALNQPSDGEMDTGRSNGLPG
CEEEEEECCCCCCCCCCCCCCCCCEEEECCCEEEEEEEEEECCCCCCCCCCCCCCCCCCC
TYKIGVWYHNGRFADQNVGTDGLSLSDPASNGNAQQRHGNYSFYAVADQMIWRPDPTGPR
EEEEEEEEECCEECCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEECCEEECCCCCCCC
SLGVFARVMGAPGDRNLVSLSANAGIVLKAPFEGRDNDSVGLGVTYIQVGNHVTDLDQTA
HHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCEEEEEEEECCCHHHHHHHH
QSFATGPYGVRTRETTLEATYQYQVNPWWIVQADAQYTFNAGAGQNPSDATQPLRNTFVI
HHHCCCCCCCEEECEEEEEEEEEECCEEEEEEECCEEEEECCCCCCCCHHHHHHHHEEEE
GARTTITF
EEEEEEEC
>Mature Secondary Structure
MKFASFQGDSVRARMRPAACAAILACASFSSGAAFADVPVDAQPEAPEADLAIQAKPTNM
CCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCE
WTGIWTRQNLLGDMGGIRPWLGKYGATLQITETSEYLANLRGGLNRGGAYDGLTTATLTV
EEEEEEHHHHHHHHCCCCHHHHCCCCEEEEECHHHHHHHHHCCCCCCCCCCCCEEEEEEE
DTQKAIGLPGGTFNVSALQIHGTNLSTRNLGTLNTASGIEAQGTTRLWELWYQQSFLDKR
ECHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
VDVKIGQQSLDQEFMVSTYANTFVNTMFGWPALPSYDLPNGGPAYPLAGLGVRVRAQITP
CEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC
KLTALAGVFDGDPLGNNPSNLSGTNFNLHNGALYIGELQYALNQPSDGEMDTGRSNGLPG
CEEEEEECCCCCCCCCCCCCCCCCEEEECCCEEEEEEEEEECCCCCCCCCCCCCCCCCCC
TYKIGVWYHNGRFADQNVGTDGLSLSDPASNGNAQQRHGNYSFYAVADQMIWRPDPTGPR
EEEEEEEEECCEECCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEECCEEECCCCCCCC
SLGVFARVMGAPGDRNLVSLSANAGIVLKAPFEGRDNDSVGLGVTYIQVGNHVTDLDQTA
HHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCEEEEEEEECCCHHHHHHHH
QSFATGPYGVRTRETTLEATYQYQVNPWWIVQADAQYTFNAGAGQNPSDATQPLRNTFVI
HHHCCCCCCCEEECEEEEEEEEEECCEEEEEEECCEEEEECCCCCCCCHHHHHHHHEEEE
GARTTITF
EEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8125108; 10984043; 2450582; 8132494; 7768797 [H]