| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is leuS
Identifier: 78065216
GI number: 78065216
Start: 629348
End: 631942
Strand: Direct
Name: leuS
Synonym: Bcep18194_A3740
Alternate gene names: 78065216
Gene position: 629348-631942 (Clockwise)
Preceding gene: 78065215
Following gene: 78065217
Centisome position: 17.04
GC content: 65.86
Gene sequence:
>2595_bases ATGCACGAGAGATACGTACCCGCCGACGTCGAAGCCGCCGCCCAGGGCGACTGGCGCGCAGCCGATGCCTACAAGACGCA GGAAGATTCGCAGAAGCCGAAGTTCTACTGCGTGTCGATGCTGCCGTACCCGTCCGGCAAGCTGCACATGGGTCACGTGC GCAACTACACGATCAACGACGTGATGTACCGCTATCTGCGGATGAACGGCTACAACACGCTGATGCCGATGGGTTGGGAT GCGTTCGGGATGCCGGCCGAGAACGCCGCGATGGCGAACGGCGTGCCGCCCGCGAAGTGGACCTACGACAACATCGACTA CATGAAGGGCCAGATGCAGTCGATGGGCCTCGCGATCGACTGGTCGCGCGAAATCGCGACGTGCAAGCCCGACTACTACA AGTGGAACCAGTGGCTGTTCCTGAAGATGCTCGAGAAGGGCATCGCGTACAAGAAGACGGGCACCGTGAACTGGGACCCG GTCGACCAGACCGTGCTCGCGAACGAGCAGGTGATCGACGGCCGCGGCTGGCGGTCGGGCGCGCTCGTCGAGAAGCGCGA AATCCCGATGTACTACCTGCGCATCACGCAGTACGCGGATGAGCTGCTGAACGACCTCGACGGCCTCGGCTGGCCCGAGC GCGTGAAGATCATGCAGCAGAACTGGATCGGCAAGAGCTTCGGCGTGAACTTCGGCTTCCCGTACGAACTCGACGGCGAG AAGAAGCTGCTGCGCGTGTTCACGACGCGCGCCGACACGATCATGGGCGTGACCTTCTGCGCGATCGCGGCCGAGCATCC GCTCGCCACGCGCCTCGCGCAGGACAAGCCGGAACTGCTCACGTTCATCGACGAATGCAAGCGCGGCGGCGTCGCCGAGG CCGACGTTGCGACGATGGAGAAGAAGGGCGTCGCGACGGGCTTCTCGGTCGCACACCCGCTGACCGGCGAGCCGGTCGAG GTGTGGATCGGCAACTACGTGCTGATGAGCTATGGCGAAGGCGCGGTGATGGGCGTGCCGGGCCACGACGAGCGCGATTT CGCGTTCGCGAAGAAATACGACCTGCCGATCAAGCAGGTGATCTCGGCCGAAGGCCAGCAGTACTCGCTCGACGCATGGC AGGAGTGGTACGGCGACAAGGAAACCGCGGTCTGCGTGAACAGCGGCAAGTACGACGGCCTGCGCTACGCGGAAGCCGTC GACGCGGTCGCGGCCGACCTGAACGCCGGCGGCTTCGGCGACAAGCAGGTCACGTGGCGCCTGCGCGACTGGGGCGTATC GCGCCAGCGCTACTGGGGCACGCCGATCCCGATCATCCACTGCCCGTCGTGCGGCGACGTGCCGGTGCCGGAGCAGGATC TCCCCGTCGTGCTGCCGGAAGACCTCGTGCCGGACGGCTCGGGCAACCCGCTCGCGAAGTCGGAAGCGTTCCTGAACTGC GCGTGCCCGAAGTGCGGCGCGGCAGCCAAGCGCGAAACCGACACGATGGATACCTTCGTCGATTCGTCGTGGTACTTCTC GCGCTACACGGCGCCGGACGCCGAGACGATGGTCGATGCGCGCACCGATTACTGGATGCCGATGGATCAGTACATCGGCG GCATCGAGCACGCGATCCTGCACTTGCTGTATTCGCGTTTCTGGACCAAGGTGATGCGCGACCTCGGCCTCGTGAAGTTC GGCGAGCCGGCGAAGAACCTGCTCACGCAGGGCATGGTGCTGAACGAGACGTTCTACCGCGAGGATGCATCGGGCAAGAA GACCTGGTACAACCCGCTCGACGTGACCGTCACGCACGACGACAAGGGCCGCCCGGTCGGCGCGACGCTGAACACGGACG GCCAGCCGGTCGTGCTCGGCGGCATCGAGAAGATGTCGAAGTCGAAGAACAACGGCGTCGATCCGCAGCTGTTGATCGAC CAGTACGGCGCCGATACCGCGCGCCTGTTCACGATGTTCGCTGCACCGCCCGAGCAGCAGCTCGAGTGGTCGGGTGCGGG CGTCGAGGGCGCAAGCCGCTTCCTGCGCCGCGTGTGGAGCTTCGGTGCGGCGAACCGCGAAGCGCTCGCCGCGCGCGCGG GCTTCGATGCGGCCGCGCTCGGCGAAGCCGACAAGGCGCTGCGCCGCGAGATCTACAGCGTGCTGAAGCAGGCCGATTTC GACTACCAGCGCCTGCAGTACAACACGGTGGTGTCGGCTGCGATGAAGATGCTGAACGCGATCGACGGCGCGAAGGGTGC GACGCCCGGCGTGCTGCGTGAAACGTACGGTGTGCTGCTGCGCGTGCTGTACCCGGTCGTGCCGCACGTCACGTTCGAGC TGTGGAAGGCGCTGGGCTACGCGGACGAATTCGGCCCGCTGCTCGACGCACCGTGGCCGAAGGTCGACGAGGCCGCGCTC GAGCAGGCCGAGATCGAACTCGTGCTGCAGGTGAACGGCAAGGTGCGCGGCGCGCTGAAGGTGGCAAAGGACGCGAGCCG CGAGGCGATCGAAGCCGCGGCAGTGGCCGACGACGCGTTCGCGAAGTTCAGCGACGGCAAGCCGGCGAAGAAGATCGTCG TCGTGCCGGGCCGCCTCGTGAACATCGTCGTCTGA
Upstream 100 bases:
>100_bases CGGCAACAGCGAACCTGCAGGTCCGCCGGGCAAGCACGATATTCGATCCACTCCTGCGCGCGCGCCGTCGCGCCGCTTAA AGCCTAGTCCGAACCACACC
Downstream 100 bases:
>100_bases CGGCCGCTGGCCGTCGGACGTACCCAGAAGGAGCGAAGGTGATCCGCAGATCGTTTTTGATGCTCGCTGTCGGCAGCGCG GTTGCGCTGTCGGCATGCGG
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS [H]
Number of amino acids: Translated: 864; Mature: 864
Protein sequence:
>864_residues MHERYVPADVEAAAQGDWRAADAYKTQEDSQKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWD AFGMPAENAAMANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSREIATCKPDYYKWNQWLFLKMLEKGIAYKKTGTVNWDP VDQTVLANEQVIDGRGWRSGALVEKREIPMYYLRITQYADELLNDLDGLGWPERVKIMQQNWIGKSFGVNFGFPYELDGE KKLLRVFTTRADTIMGVTFCAIAAEHPLATRLAQDKPELLTFIDECKRGGVAEADVATMEKKGVATGFSVAHPLTGEPVE VWIGNYVLMSYGEGAVMGVPGHDERDFAFAKKYDLPIKQVISAEGQQYSLDAWQEWYGDKETAVCVNSGKYDGLRYAEAV DAVAADLNAGGFGDKQVTWRLRDWGVSRQRYWGTPIPIIHCPSCGDVPVPEQDLPVVLPEDLVPDGSGNPLAKSEAFLNC ACPKCGAAAKRETDTMDTFVDSSWYFSRYTAPDAETMVDARTDYWMPMDQYIGGIEHAILHLLYSRFWTKVMRDLGLVKF GEPAKNLLTQGMVLNETFYREDASGKKTWYNPLDVTVTHDDKGRPVGATLNTDGQPVVLGGIEKMSKSKNNGVDPQLLID QYGADTARLFTMFAAPPEQQLEWSGAGVEGASRFLRRVWSFGAANREALAARAGFDAAALGEADKALRREIYSVLKQADF DYQRLQYNTVVSAAMKMLNAIDGAKGATPGVLRETYGVLLRVLYPVVPHVTFELWKALGYADEFGPLLDAPWPKVDEAAL EQAEIELVLQVNGKVRGALKVAKDASREAIEAAAVADDAFAKFSDGKPAKKIVVVPGRLVNIVV
Sequences:
>Translated_864_residues MHERYVPADVEAAAQGDWRAADAYKTQEDSQKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWD AFGMPAENAAMANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSREIATCKPDYYKWNQWLFLKMLEKGIAYKKTGTVNWDP VDQTVLANEQVIDGRGWRSGALVEKREIPMYYLRITQYADELLNDLDGLGWPERVKIMQQNWIGKSFGVNFGFPYELDGE KKLLRVFTTRADTIMGVTFCAIAAEHPLATRLAQDKPELLTFIDECKRGGVAEADVATMEKKGVATGFSVAHPLTGEPVE VWIGNYVLMSYGEGAVMGVPGHDERDFAFAKKYDLPIKQVISAEGQQYSLDAWQEWYGDKETAVCVNSGKYDGLRYAEAV DAVAADLNAGGFGDKQVTWRLRDWGVSRQRYWGTPIPIIHCPSCGDVPVPEQDLPVVLPEDLVPDGSGNPLAKSEAFLNC ACPKCGAAAKRETDTMDTFVDSSWYFSRYTAPDAETMVDARTDYWMPMDQYIGGIEHAILHLLYSRFWTKVMRDLGLVKF GEPAKNLLTQGMVLNETFYREDASGKKTWYNPLDVTVTHDDKGRPVGATLNTDGQPVVLGGIEKMSKSKNNGVDPQLLID QYGADTARLFTMFAAPPEQQLEWSGAGVEGASRFLRRVWSFGAANREALAARAGFDAAALGEADKALRREIYSVLKQADF DYQRLQYNTVVSAAMKMLNAIDGAKGATPGVLRETYGVLLRVLYPVVPHVTFELWKALGYADEFGPLLDAPWPKVDEAAL EQAEIELVLQVNGKVRGALKVAKDASREAIEAAAVADDAFAKFSDGKPAKKIVVVPGRLVNIVV >Mature_864_residues MHERYVPADVEAAAQGDWRAADAYKTQEDSQKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWD AFGMPAENAAMANGVPPAKWTYDNIDYMKGQMQSMGLAIDWSREIATCKPDYYKWNQWLFLKMLEKGIAYKKTGTVNWDP VDQTVLANEQVIDGRGWRSGALVEKREIPMYYLRITQYADELLNDLDGLGWPERVKIMQQNWIGKSFGVNFGFPYELDGE KKLLRVFTTRADTIMGVTFCAIAAEHPLATRLAQDKPELLTFIDECKRGGVAEADVATMEKKGVATGFSVAHPLTGEPVE VWIGNYVLMSYGEGAVMGVPGHDERDFAFAKKYDLPIKQVISAEGQQYSLDAWQEWYGDKETAVCVNSGKYDGLRYAEAV DAVAADLNAGGFGDKQVTWRLRDWGVSRQRYWGTPIPIIHCPSCGDVPVPEQDLPVVLPEDLVPDGSGNPLAKSEAFLNC ACPKCGAAAKRETDTMDTFVDSSWYFSRYTAPDAETMVDARTDYWMPMDQYIGGIEHAILHLLYSRFWTKVMRDLGLVKF GEPAKNLLTQGMVLNETFYREDASGKKTWYNPLDVTVTHDDKGRPVGATLNTDGQPVVLGGIEKMSKSKNNGVDPQLLID QYGADTARLFTMFAAPPEQQLEWSGAGVEGASRFLRRVWSFGAANREALAARAGFDAAALGEADKALRREIYSVLKQADF DYQRLQYNTVVSAAMKMLNAIDGAKGATPGVLRETYGVLLRVLYPVVPHVTFELWKALGYADEFGPLLDAPWPKVDEAAL EQAEIELVLQVNGKVRGALKVAKDASREAIEAAAVADDAFAKFSDGKPAKKIVVVPGRLVNIVV
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI7661872, Length=868, Percent_Identity=36.6359447004608, Blast_Score=528, Evalue=1e-149, Organism=Escherichia coli, GI1786861, Length=874, Percent_Identity=50, Blast_Score=865, Evalue=0.0, Organism=Escherichia coli, GI1790708, Length=386, Percent_Identity=23.8341968911917, Blast_Score=84, Evalue=3e-17, Organism=Caenorhabditis elegans, GI71997510, Length=267, Percent_Identity=40.8239700374532, Blast_Score=220, Evalue=3e-57, Organism=Caenorhabditis elegans, GI71997517, Length=267, Percent_Identity=40.8239700374532, Blast_Score=220, Evalue=3e-57, Organism=Caenorhabditis elegans, GI212645227, Length=338, Percent_Identity=30.1775147928994, Blast_Score=142, Evalue=7e-34, Organism=Saccharomyces cerevisiae, GI6323414, Length=835, Percent_Identity=40.1197604790419, Blast_Score=559, Evalue=1e-160, Organism=Saccharomyces cerevisiae, GI6321531, Length=401, Percent_Identity=23.4413965087282, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI21355409, Length=897, Percent_Identity=35.4515050167224, Blast_Score=454, Evalue=1e-127, Organism=Drosophila melanogaster, GI281366294, Length=367, Percent_Identity=21.7983651226158, Blast_Score=68, Evalue=3e-11,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 [H]
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1 [H]
EC number: =6.1.1.4 [H]
Molecular weight: Translated: 96090; Mature: 96090
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHERYVPADVEAAAQGDWRAADAYKTQEDSQKPKFYCVSMLPYPSGKLHMGHVRNYTIND CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCHHH VMYRYLRMNGYNTLMPMGWDAFGMPAENAAMANGVPPAKWTYDNIDYMKGQMQSMGLAID HHHHHHHHCCCCEECCCCCCCCCCCCCCCHHCCCCCCCCEECCCHHHHHHHHHHCCEEEE WSREIATCKPDYYKWNQWLFLKMLEKGIAYKKTGTVNWDPVDQTVLANEQVIDGRGWRSG CCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHCCCEEECCCCCCCC ALVEKREIPMYYLRITQYADELLNDLDGLGWPERVKIMQQNWIGKSFGVNFGFPYELDGE CCEECCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHCCCCCCCCEEECCH KKLLRVFTTRADTIMGVTFCAIAAEHPLATRLAQDKPELLTFIDECKRGGVAEADVATME HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHH KKGVATGFSVAHPLTGEPVEVWIGNYVLMSYGEGAVMGVPGHDERDFAFAKKYDLPIKQV HCCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCCEEECCCCCCCCCHHHHHCCCCHHHH ISAEGQQYSLDAWQEWYGDKETAVCVNSGKYDGLRYAEAVDAVAADLNAGGFGDKQVTWR HHCCCCEEEHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEE LRDWGVSRQRYWGTPIPIIHCPSCGDVPVPEQDLPVVLPEDLVPDGSGNPLAKSEAFLNC EHHCCCCCHHCCCCCCCEEECCCCCCCCCCCCCCCEECCHHCCCCCCCCCCCCCCHHEEE ACPKCGAAAKRETDTMDTFVDSSWYFSRYTAPDAETMVDARTDYWMPMDQYIGGIEHAIL CCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCHHHHHCHHHHHHH HLLYSRFWTKVMRDLGLVKFGEPAKNLLTQGMVLNETFYREDASGKKTWYNPLDVTVTHD HHHHHHHHHHHHHHCCCEECCCHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCEEEEEEEC DKGRPVGATLNTDGQPVVLGGIEKMSKSKNNGVDPQLLIDQYGADTARLFTMFAAPPEQQ CCCCEECEEECCCCCEEEEECHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHEECCCCHHH LEWSGAGVEGASRFLRRVWSFGAANREALAARAGFDAAALGEADKALRREIYSVLKQADF CEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHCCC DYQRLQYNTVVSAAMKMLNAIDGAKGATPGVLRETYGVLLRVLYPVVPHVTFELWKALGY CHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ADEFGPLLDAPWPKVDEAALEQAEIELVLQVNGKVRGALKVAKDASREAIEAAAVADDAF CHHHCCCCCCCCCCCCHHHHHHCCEEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHH AKFSDGKPAKKIVVVPGRLVNIVV HHCCCCCCCCEEEECCCCEEEEEC >Mature Secondary Structure MHERYVPADVEAAAQGDWRAADAYKTQEDSQKPKFYCVSMLPYPSGKLHMGHVRNYTIND CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCHHH VMYRYLRMNGYNTLMPMGWDAFGMPAENAAMANGVPPAKWTYDNIDYMKGQMQSMGLAID HHHHHHHHCCCCEECCCCCCCCCCCCCCCHHCCCCCCCCEECCCHHHHHHHHHHCCEEEE WSREIATCKPDYYKWNQWLFLKMLEKGIAYKKTGTVNWDPVDQTVLANEQVIDGRGWRSG CCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHCCCEEECCCCCCCC ALVEKREIPMYYLRITQYADELLNDLDGLGWPERVKIMQQNWIGKSFGVNFGFPYELDGE CCEECCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHCCCCCCCCEEECCH KKLLRVFTTRADTIMGVTFCAIAAEHPLATRLAQDKPELLTFIDECKRGGVAEADVATME HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHH KKGVATGFSVAHPLTGEPVEVWIGNYVLMSYGEGAVMGVPGHDERDFAFAKKYDLPIKQV HCCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCCEEECCCCCCCCCHHHHHCCCCHHHH ISAEGQQYSLDAWQEWYGDKETAVCVNSGKYDGLRYAEAVDAVAADLNAGGFGDKQVTWR HHCCCCEEEHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEE LRDWGVSRQRYWGTPIPIIHCPSCGDVPVPEQDLPVVLPEDLVPDGSGNPLAKSEAFLNC EHHCCCCCHHCCCCCCCEEECCCCCCCCCCCCCCCEECCHHCCCCCCCCCCCCCCHHEEE ACPKCGAAAKRETDTMDTFVDSSWYFSRYTAPDAETMVDARTDYWMPMDQYIGGIEHAIL CCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCHHHHHCHHHHHHH HLLYSRFWTKVMRDLGLVKFGEPAKNLLTQGMVLNETFYREDASGKKTWYNPLDVTVTHD HHHHHHHHHHHHHHCCCEECCCHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCEEEEEEEC DKGRPVGATLNTDGQPVVLGGIEKMSKSKNNGVDPQLLIDQYGADTARLFTMFAAPPEQQ CCCCEECEEECCCCCEEEEECHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHEECCCCHHH LEWSGAGVEGASRFLRRVWSFGAANREALAARAGFDAAALGEADKALRREIYSVLKQADF CEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHCCC DYQRLQYNTVVSAAMKMLNAIDGAKGATPGVLRETYGVLLRVLYPVVPHVTFELWKALGY CHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ADEFGPLLDAPWPKVDEAALEQAEIELVLQVNGKVRGALKVAKDASREAIEAAAVADDAF CHHHCCCCCCCCCCCCHHHHHHCCEEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHH AKFSDGKPAKKIVVVPGRLVNIVV HHCCCCCCCCEEEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA