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The map label for this gene is 78065217

Identifier: 78065217

GI number: 78065217

Start: 632002

End: 632535

Strand: Direct

Name: 78065217

Synonym: Bcep18194_A3741

Alternate gene names: NA

Gene position: 632002-632535 (Clockwise)

Preceding gene: 78065216

Following gene: 78065218

Centisome position: 17.11

GC content: 68.54

Gene sequence:

>534_bases
ATGCTCGCTGTCGGCAGCGCGGTTGCGCTGTCGGCATGCGGCTTCCAGTTGCGCGGCCAGCAGGACTACGCGTTCAAGCA
CCTGCTGATCGCCGGCGCGCCGGCGCCGGTCGAGGCGCGCCTCGTGCGCCTCGTCGAGGCCGGCAGCGACACGAAGATCG
TCAAGTCGGCGGACGACGCCGATGCCGTGCTGCGCATGTGGGAGTCGCGTGGCCAGAACACGCTGACGCTCAACAAGTAC
GGCTCGGCGCAGGAATACGCGCTGTTCTACACGCTGACCTACACGTTGACGAGCAAGGACGGCACCGTGCTGATCCCGCC
GAGCGCGATCGCGCTGAACCGCGCGATGACGTACAGCGATCAGTACACGAACGCGAAGGCGCAGGAAGCCGACCTCCTGT
ACGCCGACATGCAGAGCGACGCGGTCGACCAGCTGATGCGGCGTCTCGCGATCGTCCATTCGCTGACGCCGGCGCCGGAA
GACGTGGTACCGGGCGTCGCACCGCGCGCGCCGTTGCCGCCGCCGCCGCTCTGA

Upstream 100 bases:

>100_bases
TCGTCGTCGTGCCGGGCCGCCTCGTGAACATCGTCGTCTGACGGCCGCTGGCCGTCGGACGTACCCAGAAGGAGCGAAGG
TGATCCGCAGATCGTTTTTG

Downstream 100 bases:

>100_bases
TCGACGGCGCACGTATCGATGCAACTGCGACTTGATGCGCTGGAGCCGCACCTCGCGAAGGGGTTGGCCGGGCTCTATAC
CGTCTACGGCGACGAGCCGC

Product: rare lipoprotein B

Products: NA

Alternate protein names: Lipoprotein; Lipoprotein B; Lipoprotein B Transmembrane; Lipoprotein B Transmembrane; Lipoprotein B Transmembrane Protein

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MLAVGSAVALSACGFQLRGQQDYAFKHLLIAGAPAPVEARLVRLVEAGSDTKIVKSADDADAVLRMWESRGQNTLTLNKY
GSAQEYALFYTLTYTLTSKDGTVLIPPSAIALNRAMTYSDQYTNAKAQEADLLYADMQSDAVDQLMRRLAIVHSLTPAPE
DVVPGVAPRAPLPPPPL

Sequences:

>Translated_177_residues
MLAVGSAVALSACGFQLRGQQDYAFKHLLIAGAPAPVEARLVRLVEAGSDTKIVKSADDADAVLRMWESRGQNTLTLNKY
GSAQEYALFYTLTYTLTSKDGTVLIPPSAIALNRAMTYSDQYTNAKAQEADLLYADMQSDAVDQLMRRLAIVHSLTPAPE
DVVPGVAPRAPLPPPPL
>Mature_177_residues
MLAVGSAVALSACGFQLRGQQDYAFKHLLIAGAPAPVEARLVRLVEAGSDTKIVKSADDADAVLRMWESRGQNTLTLNKY
GSAQEYALFYTLTYTLTSKDGTVLIPPSAIALNRAMTYSDQYTNAKAQEADLLYADMQSDAVDQLMRRLAIVHSLTPAPE
DVVPGVAPRAPLPPPPL

Specific function: Unknown

COG id: COG2980

COG function: function code M; Rare lipoprotein B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19034; Mature: 19034

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAVGSAVALSACGFQLRGQQDYAFKHLLIAGAPAPVEARLVRLVEAGSDTKIVKSADDA
CCCCCCHHHHHHCCCEECCCCCHHEEEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCHH
DAVLRMWESRGQNTLTLNKYGSAQEYALFYTLTYTLTSKDGTVLIPPSAIALNRAMTYSD
HHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEEEEEECCCCEEEECCCHHHHHHHHCCCC
QYTNAKAQEADLLYADMQSDAVDQLMRRLAIVHSLTPAPEDVVPGVAPRAPLPPPPL
CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLAVGSAVALSACGFQLRGQQDYAFKHLLIAGAPAPVEARLVRLVEAGSDTKIVKSADDA
CCCCCCHHHHHHCCCEECCCCCHHEEEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCHH
DAVLRMWESRGQNTLTLNKYGSAQEYALFYTLTYTLTSKDGTVLIPPSAIALNRAMTYSD
HHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEEEEEECCCCEEEECCCHHHHHHHHCCCC
QYTNAKAQEADLLYADMQSDAVDQLMRRLAIVHSLTPAPEDVVPGVAPRAPLPPPPL
CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA