Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
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Accession | NC_007508 |
Length | 5,178,466 |
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The map label for this gene is dhbF [H]
Identifier: 78049591
GI number: 78049591
Start: 4633071
End: 4634858
Strand: Reverse
Name: dhbF [H]
Synonym: XCV4035
Alternate gene names: 78049591
Gene position: 4634858-4633071 (Counterclockwise)
Preceding gene: 78049592
Following gene: 78049590
Centisome position: 89.5
GC content: 67.34
Gene sequence:
>1788_bases TTGTACGGGCCTACCGAAACCACGATCTGGTCGACCATCATGCCGTTGCAGTTGACCGATGCCGCCGCACCGCCGATCGG CAGGCCGCTGCTCAATACGCGCGTCTATGTGCTGGATGCGCAGCGGCAACCGCTGCCGACCGGTGCGATCGGCGAGCTGT ATATCGGTGGCGCAGGCGTGGCCAAAGGCTATCGCGGCAAGCGCCAGCTGACCAGCGAGCGCTTCATGCGCGACCCGTTC GCCGACGACGGCAGCAGCATGTACCGCACCGGCGACCGCGTGCGTCAACGCAGCGATGGCCTGCTGGAATTCATCGGGCG CGCCGATGCGCAGCTGAAGATCCGCGGACATCGGGTGGAGCCGGCCGAAATCGAAAGCGCCCTGCTGTTGCATTCGCAGG TGGCGCAGGCGGTGGTGGTGGGCCACGGCGATGGCGAGCATGCCTTGCAACTGCTGGCCTATGTGGTGGGCAAGCACGGC AATGCGCCGTCGATCGAGTTGTTGCGCGCGCATCTGCAGCAGCGCCTGCCGGCATCGATGATTCCCACCCTGTGGGTGCC GCTGGAGGCGTTGCCGCTGACCCCCAACGGCAAGCTGGACCGGCGCGCGTTGCCGGCGCCTGGCGCATTGCCGCAACGCG CGCATCTGGCGCCGCGCGATGCGCTCGAACGCCAGCTGGCAACGATGCTGCAGGAGGTGCTGGGCATCGAAGTGGTGGGC GTGGACGACAATTTCTTCGAGCTTGGCGGCGATTCGCTGCGTGCGGCGGAAATGGCCGCGCGTTTCCCGCAGATGTTCGG GGTGGAACTGCCGCTGGGAACATTGTTCCATGCGCCGACGGTCGCCGGCCTGGCCGAGGTGATCAAGCGCAGCGCACACA CGCCCAACGACCCGCTGAGCGTGCTGTTGCCGCTGCGTGCAGGCACCGCCGGCAGCACGCCGCTGTTCTGCATCCATCCG GTCATCGGTCTGGGCTGGTCGTATCTCACCTTGCTGGGTCAGCTGGATCCGCAGTGGCCGGTGTATGCGCTGCAATCGCC GGGCTTGAGCGACCCGCAGCACCGTCCGGAGAGCATCGAGGCGATCGCGCGCGATTACCTGGCGCGTCTGCGCAGCGTGC AGCCGAGGGGGCCGTACCGTCTGCTGGGCTGGTCGCTGGGCGGTTTGATCGCGCACGCCATCACCGCCGAATTGCATGCG CTGGGCGAAGAGGTCGAGGTGTTGGCCATGCTCGACAGTTACCCGCATCTGGAACAGGCCGCAGCGTTGTCGGAATCGGA GAACGTGCGCGCCTCGGTGCACGCGTTGGCCTTGCATCTGGCGCCGGGCCAGCCGATGCCGACCACGGTCGCCGAGCTGG CGAGCCTGTTGTGCGATCACTACGGGCTGAACGAATTGCCTGCGGTGCGCCAGTTGCTGGAGCAACGTCCCACCTTGCTG GACGATCTGGGCGCCCTCACCCAACATCACCTGCAGCTGGCGCGGCGTCATCGGCCCAGGCAGCTGGACCAGGATGTGGT CTTTGTCGAAGCGAGCGTGCGCATGAGCTCCGGCGGCGACGATGCGCTGTGGGTGGATTACCGTCCCCAGGCGTGGCACC CGTACGTGCGCAACCTGCAGCTGCACGTTCTGGACAGCGACCACCATTCAATGCTCTCGCCGACGCATGCGGCCACGCTC AGCACCTTGCTGCACGCGGCCACCGCAGAGGCCACCCGGGCTGTGCGGCCGGTGGGACAGGCCGGCCGTGGCGCGGTCGC CGGCGACGGAGTGACCGAATATGCCTGA
Upstream 100 bases:
>100_bases ATCTGGTGCTGGATCGCATTCATGCGTTGATCGGCGGCGAGGCGTTGGTGCCGGAACTGGCCACCCAACTGCTCAGCCGG GTGTGGGGCGCCTGACCCAG
Downstream 100 bases:
>100_bases GTCCAGCGCCGATCCGTTACGCCAGCGCCCGGTGGTGATCGCCACCCTTGGCACGCATGGGGACGTGCGCCCGATCATTG CGCTGGCCCTTGGCCTGCAG
Product: putative non-ribosomal peptide synthetase
Products: pyrophosphate; AMP; enterobactin; pyrophosphate; L-Seryl-AMP [C]
Alternate protein names: NA
Number of amino acids: Translated: 595; Mature: 595
Protein sequence:
>595_residues MYGPTETTIWSTIMPLQLTDAAAPPIGRPLLNTRVYVLDAQRQPLPTGAIGELYIGGAGVAKGYRGKRQLTSERFMRDPF ADDGSSMYRTGDRVRQRSDGLLEFIGRADAQLKIRGHRVEPAEIESALLLHSQVAQAVVVGHGDGEHALQLLAYVVGKHG NAPSIELLRAHLQQRLPASMIPTLWVPLEALPLTPNGKLDRRALPAPGALPQRAHLAPRDALERQLATMLQEVLGIEVVG VDDNFFELGGDSLRAAEMAARFPQMFGVELPLGTLFHAPTVAGLAEVIKRSAHTPNDPLSVLLPLRAGTAGSTPLFCIHP VIGLGWSYLTLLGQLDPQWPVYALQSPGLSDPQHRPESIEAIARDYLARLRSVQPRGPYRLLGWSLGGLIAHAITAELHA LGEEVEVLAMLDSYPHLEQAAALSESENVRASVHALALHLAPGQPMPTTVAELASLLCDHYGLNELPAVRQLLEQRPTLL DDLGALTQHHLQLARRHRPRQLDQDVVFVEASVRMSSGGDDALWVDYRPQAWHPYVRNLQLHVLDSDHHSMLSPTHAATL STLLHAATAEATRAVRPVGQAGRGAVAGDGVTEYA
Sequences:
>Translated_595_residues MYGPTETTIWSTIMPLQLTDAAAPPIGRPLLNTRVYVLDAQRQPLPTGAIGELYIGGAGVAKGYRGKRQLTSERFMRDPF ADDGSSMYRTGDRVRQRSDGLLEFIGRADAQLKIRGHRVEPAEIESALLLHSQVAQAVVVGHGDGEHALQLLAYVVGKHG NAPSIELLRAHLQQRLPASMIPTLWVPLEALPLTPNGKLDRRALPAPGALPQRAHLAPRDALERQLATMLQEVLGIEVVG VDDNFFELGGDSLRAAEMAARFPQMFGVELPLGTLFHAPTVAGLAEVIKRSAHTPNDPLSVLLPLRAGTAGSTPLFCIHP VIGLGWSYLTLLGQLDPQWPVYALQSPGLSDPQHRPESIEAIARDYLARLRSVQPRGPYRLLGWSLGGLIAHAITAELHA LGEEVEVLAMLDSYPHLEQAAALSESENVRASVHALALHLAPGQPMPTTVAELASLLCDHYGLNELPAVRQLLEQRPTLL DDLGALTQHHLQLARRHRPRQLDQDVVFVEASVRMSSGGDDALWVDYRPQAWHPYVRNLQLHVLDSDHHSMLSPTHAATL STLLHAATAEATRAVRPVGQAGRGAVAGDGVTEYA >Mature_595_residues MYGPTETTIWSTIMPLQLTDAAAPPIGRPLLNTRVYVLDAQRQPLPTGAIGELYIGGAGVAKGYRGKRQLTSERFMRDPF ADDGSSMYRTGDRVRQRSDGLLEFIGRADAQLKIRGHRVEPAEIESALLLHSQVAQAVVVGHGDGEHALQLLAYVVGKHG NAPSIELLRAHLQQRLPASMIPTLWVPLEALPLTPNGKLDRRALPAPGALPQRAHLAPRDALERQLATMLQEVLGIEVVG VDDNFFELGGDSLRAAEMAARFPQMFGVELPLGTLFHAPTVAGLAEVIKRSAHTPNDPLSVLLPLRAGTAGSTPLFCIHP VIGLGWSYLTLLGQLDPQWPVYALQSPGLSDPQHRPESIEAIARDYLARLRSVQPRGPYRLLGWSLGGLIAHAITAELHA LGEEVEVLAMLDSYPHLEQAAALSESENVRASVHALALHLAPGQPMPTTVAELASLLCDHYGLNELPAVRQLLEQRPTLL DDLGALTQHHLQLARRHRPRQLDQDVVFVEASVRMSSGGDDALWVDYRPQAWHPYVRNLQLHVLDSDHHSMLSPTHAATL STLLHAATAEATRAVRPVGQAGRGAVAGDGVTEYA
Specific function: Specifically adenylates threonine and glycine, and loads them onto their corresponding peptidyl carrier domains [H]
COG id: COG1020
COG function: function code Q; Non-ribosomal peptide synthetase modules and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain [H]
Homologues:
Organism=Homo sapiens, GI45580730, Length=307, Percent_Identity=26.0586319218241, Blast_Score=81, Evalue=3e-15, Organism=Homo sapiens, GI156151445, Length=205, Percent_Identity=27.3170731707317, Blast_Score=75, Evalue=2e-13, Organism=Escherichia coli, GI1786801, Length=427, Percent_Identity=39.344262295082, Blast_Score=265, Evalue=8e-72, Organism=Escherichia coli, GI1790505, Length=213, Percent_Identity=32.8638497652582, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI1786810, Length=192, Percent_Identity=28.6458333333333, Blast_Score=69, Evalue=8e-13, Organism=Escherichia coli, GI145693145, Length=169, Percent_Identity=28.9940828402367, Blast_Score=62, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17550940, Length=420, Percent_Identity=23.8095238095238, Blast_Score=113, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17556356, Length=307, Percent_Identity=29.9674267100977, Blast_Score=102, Evalue=8e-22, Organism=Caenorhabditis elegans, GI17538037, Length=204, Percent_Identity=27.4509803921569, Blast_Score=69, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6319591, Length=360, Percent_Identity=27.7777777777778, Blast_Score=136, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6319699, Length=204, Percent_Identity=28.4313725490196, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24648676, Length=281, Percent_Identity=32.3843416370107, Blast_Score=118, Evalue=1e-26, Organism=Drosophila melanogaster, GI24581924, Length=208, Percent_Identity=29.3269230769231, Blast_Score=80, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010071 - InterPro: IPR009081 - InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR001242 - InterPro: IPR006163 - InterPro: IPR020806 - InterPro: IPR001031 [H]
Pfam domain/function: PF00501 AMP-binding; PF00668 Condensation; PF00550 PP-binding; PF00975 Thioesterase [H]
EC number: 2.7.7.- [C]
Molecular weight: Translated: 64574; Mature: 64574
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: PS00012 PHOSPHOPANTETHEINE ; PS50075 ACP_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYGPTETTIWSTIMPLQLTDAAAPPIGRPLLNTRVYVLDAQRQPLPTGAIGELYIGGAGV CCCCCCCHHHHHCCCEEECCCCCCCCCCCHHCCEEEEEECCCCCCCCCCCCCEEECCCHH AKGYRGKRQLTSERFMRDPFADDGSSMYRTGDRVRQRSDGLLEFIGRADAQLKIRGHRVE HCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC PAEIESALLLHSQVAQAVVVGHGDGEHALQLLAYVVGKHGNAPSIELLRAHLQQRLPASM HHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHH IPTLWVPLEALPLTPNGKLDRRALPAPGALPQRAHLAPRDALERQLATMLQEVLGIEVVG CCHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEE VDDNFFELGGDSLRAAEMAARFPQMFGVELPLGTLFHAPTVAGLAEVIKRSAHTPNDPLS CCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHCCCCCCCCE VLLPLRAGTAGSTPLFCIHPVIGLGWSYLTLLGQLDPQWPVYALQSPGLSDPQHRPESIE EEEEEECCCCCCCCEEEECHHHHCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHH AIARDYLARLRSVQPRGPYRLLGWSLGGLIAHAITAELHALGEEVEVLAMLDSYPHLEQA HHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AALSESENVRASVHALALHLAPGQPMPTTVAELASLLCDHYGLNELPAVRQLLEQRPTLL HHHCCCCCHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHH DDLGALTQHHLQLARRHRPRQLDQDVVFVEASVRMSSGGDDALWVDYRPQAWHPYVRNLQ HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCEEEEECCCCCCCHHHCCEE LHVLDSDHHSMLSPTHAATLSTLLHAATAEATRAVRPVGQAGRGAVAGDGVTEYA EEEEECCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MYGPTETTIWSTIMPLQLTDAAAPPIGRPLLNTRVYVLDAQRQPLPTGAIGELYIGGAGV CCCCCCCHHHHHCCCEEECCCCCCCCCCCHHCCEEEEEECCCCCCCCCCCCCEEECCCHH AKGYRGKRQLTSERFMRDPFADDGSSMYRTGDRVRQRSDGLLEFIGRADAQLKIRGHRVE HCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC PAEIESALLLHSQVAQAVVVGHGDGEHALQLLAYVVGKHGNAPSIELLRAHLQQRLPASM HHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHH IPTLWVPLEALPLTPNGKLDRRALPAPGALPQRAHLAPRDALERQLATMLQEVLGIEVVG CCHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEE VDDNFFELGGDSLRAAEMAARFPQMFGVELPLGTLFHAPTVAGLAEVIKRSAHTPNDPLS CCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHCCCCCCCCE VLLPLRAGTAGSTPLFCIHPVIGLGWSYLTLLGQLDPQWPVYALQSPGLSDPQHRPESIE EEEEEECCCCCCCCEEEECHHHHCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHH AIARDYLARLRSVQPRGPYRLLGWSLGGLIAHAITAELHALGEEVEVLAMLDSYPHLEQA HHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AALSESENVRASVHALALHLAPGQPMPTTVAELASLLCDHYGLNELPAVRQLLEQRPTLL HHHCCCCCHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHH DDLGALTQHHLQLARRHRPRQLDQDVVFVEASVRMSSGGDDALWVDYRPQAWHPYVRNLQ HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCEEEEECCCCCCCHHHCCEE LHVLDSDHHSMLSPTHAATLSTLLHAATAEATRAVRPVGQAGRGAVAGDGVTEYA EEEEECCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: Phosphopantetheine. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 6 ATP; L-serine; 2,3-dihydroxybenzoate [C]
Specific reaction: 6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate = 6 pyrophosphate + 6 AMP + enterobactin ATP + L-serine = pyrophosphate + L-Seryl-AMP 6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate = 6 pyrophosphate + 6 AMP + enterobactin ATP + L-serine = pyrophosphate + L-Ser
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11112781; 9384377; 10568751; 8550523 [H]