Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
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Accession | NC_007508 |
Length | 5,178,466 |
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The map label for this gene is 78049590
Identifier: 78049590
GI number: 78049590
Start: 4631750
End: 4633078
Strand: Reverse
Name: 78049590
Synonym: XCV4034
Alternate gene names: NA
Gene position: 4633078-4631750 (Counterclockwise)
Preceding gene: 78049591
Following gene: 78049589
Centisome position: 89.47
GC content: 69.15
Gene sequence:
>1329_bases ATGCCTGAGTCCAGCGCCGATCCGTTACGCCAGCGCCCGGTGGTGATCGCCACCCTTGGCACGCATGGGGACGTGCGCCC GATCATTGCGCTGGCCCTTGGCCTGCAGCGGCGCGGTTATCCGGCGCGGGTGCTGACCAGTTCCAACTTCGAGTCGTTGA TCCGTGCGCACGGCCTGGAATTCTTCCCGCTCAGCGGCGATCTCCAGCAACTGTTGCACGACCATCCGGACGTTGCCGAG ATGCGCGGTGCCCCTGGCATCTTGCGCAAGAAGTTGCTGGAGTGGGCGCGCGATTGGCCCGCGCAGGGCCGCGCGGCGTG TGCCGATGCCGGCTTGATCCTGGGCGTGGGCAGTGCCAGTTTCCTCGTCCATAGCCTGGGCGAGGCGTATGGCGTGCCGG TGGCGTTTGCGCAGTTGCAGCCGCTCACCGAGTCGCGCCACCTGCCGTTGATGCTGATGCCCAACCTGCGTCTTCCGGGA CGTGTCAACGTGGCATTGCATCGCCTGATGCGCTTTGTCGGCTGGCAGCTGATGCGGCCGGCCTTCAACGATATCGTGCG TCCGGCGTTGGGGCTGCCGGGATATCCGTGGAGCGGTCCGGATCGCAGCGCACTACGCGTGATCTACGGCTATAGCGCGC ACGTGTGTCCGCGTCCGCCGGACTGGCCGGAGAGCGCGCAGGTGTGCGGCTTCTGGCAGCTGCCGCCGTCGCAGTGGCAA CCGCCGGCCGCGCTGCAGGCGTTTTTGCAGGCCGGGCCGCCGCCGCTGTATATCGGTTTCGGCAGCATGACCAGTAGCGC GGTCGCGCAGCTCACTGCCACGGTCAAGGCAGCGGTGCGACTGACCGGGCAGCGCGCGTTGCTGGCCAGCGGCTGGGGCG GTCTGGGGGCCGGGGACGCTGTCGCCGATGATGCCGAGCGCTTCTTCCATCTGGAACAGGCACCGCACGATTGGCTGTTC CCGCGCGTGGCGGTGGCCGTGCATCACGGTGGCGCCGGCACCAGTGGTGCTGCGTTGGCGGCGGGCATTCCCTCGGTGGT GCTGCCCTTTGGCTACGACCAGTTGTTCTGGGCCCATTGCCTGGCCCAGCGCGGCGTTGCGCCGCCAGCGCTGGCGCGTG CGGGGCTGCAGCCCGAAGCCCTGGCCGCTGCCATCCGGCAGGCGGGCACGCCGGCCATGCGTGCGGCTGCGCGCGCACTC GGTCAACGGATCGGCCAGGAAGACGGCGTCCGCAACGCGGTCGATCAGCTGGAAGCCTGGCAATTGCTTGAACCCGCGGC AGTGACGCCCGCGGCGGCCGCACGGACCGAGCAGCACGCCATCGCATAA
Upstream 100 bases:
>100_bases AGCACCTTGCTGCACGCGGCCACCGCAGAGGCCACCCGGGCTGTGCGGCCGGTGGGACAGGCCGGCCGTGGCGCGGTCGC CGGCGACGGAGTGACCGAAT
Downstream 100 bases:
>100_bases GCATGGCGATGCTGCGCATCCGCCGCAGCGCTGATGCGCGCACTGCGGCGCGGTGGAGCAGTGCGTGGTTGGCGGCGACA CCCTGCGCGCTGCCGGCATG
Product: putative glucosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MPESSADPLRQRPVVIATLGTHGDVRPIIALALGLQRRGYPARVLTSSNFESLIRAHGLEFFPLSGDLQQLLHDHPDVAE MRGAPGILRKKLLEWARDWPAQGRAACADAGLILGVGSASFLVHSLGEAYGVPVAFAQLQPLTESRHLPLMLMPNLRLPG RVNVALHRLMRFVGWQLMRPAFNDIVRPALGLPGYPWSGPDRSALRVIYGYSAHVCPRPPDWPESAQVCGFWQLPPSQWQ PPAALQAFLQAGPPPLYIGFGSMTSSAVAQLTATVKAAVRLTGQRALLASGWGGLGAGDAVADDAERFFHLEQAPHDWLF PRVAVAVHHGGAGTSGAALAAGIPSVVLPFGYDQLFWAHCLAQRGVAPPALARAGLQPEALAAAIRQAGTPAMRAAARAL GQRIGQEDGVRNAVDQLEAWQLLEPAAVTPAAAARTEQHAIA
Sequences:
>Translated_442_residues MPESSADPLRQRPVVIATLGTHGDVRPIIALALGLQRRGYPARVLTSSNFESLIRAHGLEFFPLSGDLQQLLHDHPDVAE MRGAPGILRKKLLEWARDWPAQGRAACADAGLILGVGSASFLVHSLGEAYGVPVAFAQLQPLTESRHLPLMLMPNLRLPG RVNVALHRLMRFVGWQLMRPAFNDIVRPALGLPGYPWSGPDRSALRVIYGYSAHVCPRPPDWPESAQVCGFWQLPPSQWQ PPAALQAFLQAGPPPLYIGFGSMTSSAVAQLTATVKAAVRLTGQRALLASGWGGLGAGDAVADDAERFFHLEQAPHDWLF PRVAVAVHHGGAGTSGAALAAGIPSVVLPFGYDQLFWAHCLAQRGVAPPALARAGLQPEALAAAIRQAGTPAMRAAARAL GQRIGQEDGVRNAVDQLEAWQLLEPAAVTPAAAARTEQHAIA >Mature_441_residues PESSADPLRQRPVVIATLGTHGDVRPIIALALGLQRRGYPARVLTSSNFESLIRAHGLEFFPLSGDLQQLLHDHPDVAEM RGAPGILRKKLLEWARDWPAQGRAACADAGLILGVGSASFLVHSLGEAYGVPVAFAQLQPLTESRHLPLMLMPNLRLPGR VNVALHRLMRFVGWQLMRPAFNDIVRPALGLPGYPWSGPDRSALRVIYGYSAHVCPRPPDWPESAQVCGFWQLPPSQWQP PAALQAFLQAGPPPLYIGFGSMTSSAVAQLTATVKAAVRLTGQRALLASGWGGLGAGDAVADDAERFFHLEQAPHDWLFP RVAVAVHHGGAGTSGAALAAGIPSVVLPFGYDQLFWAHCLAQRGVAPPALARAGLQPEALAAAIRQAGTPAMRAAARALG QRIGQEDGVRNAVDQLEAWQLLEPAAVTPAAAARTEQHAIA
Specific function: Unknown
COG id: COG1819
COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 28 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6323218, Length=453, Percent_Identity=29.5805739514349, Blast_Score=186, Evalue=7e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004276 [H]
Pfam domain/function: PF03033 Glyco_transf_28 [H]
EC number: NA
Molecular weight: Translated: 47101; Mature: 46969
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPESSADPLRQRPVVIATLGTHGDVRPIIALALGLQRRGYPARVLTSSNFESLIRAHGLE CCCCCCCHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCE FFPLSGDLQQLLHDHPDVAEMRGAPGILRKKLLEWARDWPAQGRAACADAGLILGVGSAS EEECCHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCEEEECCHHH FLVHSLGEAYGVPVAFAQLQPLTESRHLPLMLMPNLRLPGRVNVALHRLMRFVGWQLMRP HHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH AFNDIVRPALGLPGYPWSGPDRSALRVIYGYSAHVCPRPPDWPESAQVCGFWQLPPSQWQ HHHHHHHHHCCCCCCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCC PPAALQAFLQAGPPPLYIGFGSMTSSAVAQLTATVKAAVRLTGQRALLASGWGGLGAGDA CHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCH VADDAERFFHLEQAPHDWLFPRVAVAVHHGGAGTSGAALAAGIPSVVLPFGYDQLFWAHC HHHHHHHHHHHHCCCCCHHHHHHEEEEECCCCCCCCCHHHHCCCHHCCCCCHHHHHHHHH LAQRGVAPPALARAGLQPEALAAAIRQAGTPAMRAAARALGQRIGQEDGVRNAVDQLEAW HHHCCCCCHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH QLLEPAAVTPAAAARTEQHAIA HHHCCCCCCCHHHHHCHHHCCC >Mature Secondary Structure PESSADPLRQRPVVIATLGTHGDVRPIIALALGLQRRGYPARVLTSSNFESLIRAHGLE CCCCCCHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCE FFPLSGDLQQLLHDHPDVAEMRGAPGILRKKLLEWARDWPAQGRAACADAGLILGVGSAS EEECCHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCEEEECCHHH FLVHSLGEAYGVPVAFAQLQPLTESRHLPLMLMPNLRLPGRVNVALHRLMRFVGWQLMRP HHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH AFNDIVRPALGLPGYPWSGPDRSALRVIYGYSAHVCPRPPDWPESAQVCGFWQLPPSQWQ HHHHHHHHHCCCCCCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCC PPAALQAFLQAGPPPLYIGFGSMTSSAVAQLTATVKAAVRLTGQRALLASGWGGLGAGDA CHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCH VADDAERFFHLEQAPHDWLFPRVAVAVHHGGAGTSGAALAAGIPSVVLPFGYDQLFWAHC HHHHHHHHHHHHCCCCCHHHHHHEEEEECCCCCCCCCHHHHCCCHHCCCCCHHHHHHHHH LAQRGVAPPALARAGLQPEALAAAIRQAGTPAMRAAARALGQRIGQEDGVRNAVDQLEAW HHHCCCCCHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH QLLEPAAVTPAAAARTEQHAIA HHHCCCCCCCHHHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]